RNA–Protein interactions for RNA: YLL011W

SOF1, Transcript of Protein required for biogenesis of 40S (small) ribosomal subunit, yeastyeast

Gene SOF1, Length 1,470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SOF1YLL011W CPA2P03965 1118 aaKnown RBP4.69□□□□□ -1.66
SOF1YLL011W TY2A-LR1P0C2J4 438 aa4.69□□□□□ -1.66
SOF1YLL011W TY2A-FP0CX61 438 aa4.69□□□□□ -1.66
SOF1YLL011W TY2A-GR2P0CX62 438 aa4.69□□□□□ -1.66
SOF1YLL011W KIN2P13186 1147 aaKnown RBP4.69□□□□□ -1.66
SOF1YLL011W ADE2P21264 571 aaKnown RBP4.69□□□□□ -1.66
SOF1YLL011W YCK1P23291 538 aa4.69□□□□□ -1.66
SOF1YLL011W OCA4P25366 362 aa4.69□□□□□ -1.66
SOF1YLL011W TY2A-CP25383 438 aa4.69□□□□□ -1.66
SOF1YLL011W PRE4P30657 266 aa4.69□□□□□ -1.66
SOF1YLL011W EFT1P32324 842 aaKnown RBP4.69□□□□□ -1.66
SOF1YLL011W IST3P40565 148 aaPredicted RBP4.69□□□□□ -1.66
SOF1YLL011W COX18P53239 316 aa4.69□□□□□ -1.66
SOF1YLL011W CIK1Q01649 594 aa4.69□□□□□ -1.66
SOF1YLL011W TY2A-DR2Q03483 438 aa4.69□□□□□ -1.66
SOF1YLL011W PPN1Q04119 674 aa4.69□□□□□ -1.66
SOF1YLL011W VBA4Q04602 768 aaKnown RBP4.69□□□□□ -1.66
SOF1YLL011W PUF3Q07807 879 aaKnown RBP RIP-Chip data4.69□□□□□ -1.66not detected
SOF1YLL011W CUE5Q08412 411 aaKnown RBP4.69□□□□□ -1.66
SOF1YLL011W GPB1Q08886 897 aa4.69□□□□□ -1.66
SOF1YLL011W TY2A-BQ12260 438 aa4.69□□□□□ -1.66
SOF1YLL011W TY2A-OR2Q12293 438 aa4.69□□□□□ -1.66
SOF1YLL011W TY2A-DR1Q12392 438 aa4.69□□□□□ -1.66
SOF1YLL011W TY2A-OR1Q12439 438 aa4.69□□□□□ -1.66
SOF1YLL011W TY2A-DR3Q99303 438 aa4.69□□□□□ -1.66
SOF1YLL011W RPB2P08518 1224 aaKnown RBP4.68□□□□□ -1.66
SOF1YLL011W BIK1P11709 440 aa4.68□□□□□ -1.66
SOF1YLL011W TRX1P22217 103 aaKnown RBP4.68□□□□□ -1.66
SOF1YLL011W ADK2P26364 225 aa4.68□□□□□ -1.66
SOF1YLL011W GCS1P35197 352 aa4.68□□□□□ -1.66
SOF1YLL011W YBL029WP38201 376 aa4.68□□□□□ -1.66
SOF1YLL011W RFC1P38630 861 aaKnown RBP4.68□□□□□ -1.66
SOF1YLL011W VFA1P40080 203 aa4.68□□□□□ -1.66
SOF1YLL011W SEC28P40509 296 aaKnown RBP4.68□□□□□ -1.66
SOF1YLL011W ZAP1P47043 880 aa4.68□□□□□ -1.66
SOF1YLL011W VPS9P54787 451 aa4.68□□□□□ -1.66
SOF1YLL011W TRS31Q03337 283 aa4.68□□□□□ -1.66
SOF1YLL011W PRP42Q03776 544 aaKnown RBP4.68□□□□□ -1.66
SOF1YLL011W VPS64Q03944 604 aa4.68□□□□□ -1.66
SOF1YLL011W WHI4Q07655 649 aaKnown RBP4.68□□□□□ -1.66
SOF1YLL011W RCN2Q12044 265 aa4.68□□□□□ -1.66
SOF1YLL011W SUL2Q12325 893 aa4.68□□□□□ -1.66
SOF1YLL011W YOL159C-AQ3E769 90 aa4.68□□□□□ -1.66
SOF1YLL011W DNF3Q12674 1656 aa4.67□□□□□ -1.66
SOF1YLL011W STF1P01098 86 aa4.67□□□□□ -1.66
SOF1YLL011W SPE1P08432 466 aa4.67□□□□□ -1.66
SOF1YLL011W ERG20P08524 352 aaKnown RBP4.67□□□□□ -1.66
SOF1YLL011W CBS1P14066 229 aa4.67□□□□□ -1.66
SOF1YLL011W STE50P25344 346 aa4.67□□□□□ -1.66
SOF1YLL011W SRO77P38163 1010 aa4.67□□□□□ -1.66
SOF1YLL011W STB5P38699 743 aa4.67□□□□□ -1.66
SOF1YLL011W FLC2P39719 783 aa4.67□□□□□ -1.66
SOF1YLL011W GDI1P39958 451 aaKnown RBP4.67□□□□□ -1.66
SOF1YLL011W MAM1P40065 302 aa4.67□□□□□ -1.66
SOF1YLL011W PRP43P53131 767 aaKnown RBP4.67□□□□□ -1.66
SOF1YLL011W ART5P53244 586 aaKnown RBP4.67□□□□□ -1.66
SOF1YLL011W ARG5,6Q01217 863 aa4.67□□□□□ -1.66
SOF1YLL011W PEX25Q02969 394 aa4.67□□□□□ -1.66
SOF1YLL011W GYL1Q04322 720 aa4.67□□□□□ -1.66
SOF1YLL011W RCO1Q04779 684 aa4.67□□□□□ -1.66
SOF1YLL011W ADY4Q05955 493 aa4.67□□□□□ -1.66
SOF1YLL011W ESC8Q08119 714 aa4.67□□□□□ -1.66
SOF1YLL011W NMD4Q12129 218 aa4.67□□□□□ -1.66
SOF1YLL011W UPC2Q12151 913 aa4.67□□□□□ -1.66
SOF1YLL011W NOP58Q12499 511 aaKnown RBP4.67□□□□□ -1.66
SOF1YLL011W MLP2P40457 1679 aa4.67□□□□□ -1.66
SOF1YLL011W RPS9BP05755 195 aaKnown RBP4.66□□□□□ -1.66
SOF1YLL011W PET122P10355 254 aa4.66□□□□□ -1.66
SOF1YLL011W GLK1P17709 500 aaKnown RBP4.66□□□□□ -1.66
SOF1YLL011W PRE8P23639 250 aa4.66□□□□□ -1.66
SOF1YLL011W SEC21P32074 935 aaKnown RBP4.66□□□□□ -1.66
SOF1YLL011W YPT7P32939 208 aa4.66□□□□□ -1.66
SOF1YLL011W STB6P36085 766 aa4.66□□□□□ -1.66
SOF1YLL011W CDS1P38221 457 aa4.66□□□□□ -1.66
SOF1YLL011W SFB3P38810 929 aa4.66□□□□□ -1.66
SOF1YLL011W MMM1P41800 426 aa4.66□□□□□ -1.66
SOF1YLL011W CIT3P43635 486 aa4.66□□□□□ -1.66
SOF1YLL011W BIT61P47041 543 aa4.66□□□□□ -1.66
SOF1YLL011W YDL183CP48569 320 aa4.66□□□□□ -1.66
SOF1YLL011W PIL1P53252 339 aaKnown RBP4.66□□□□□ -1.66
SOF1YLL011W REC102Q02721 264 aa4.66□□□□□ -1.66
SOF1YLL011W RSM24Q03976 319 aa4.66□□□□□ -1.66
SOF1YLL011W SIZ1Q04195 904 aa4.66□□□□□ -1.66
SOF1YLL011W ERB1Q04660 807 aaKnown RBP4.66□□□□□ -1.66
SOF1YLL011W SKG3Q06315 1026 aa4.66□□□□□ -1.66
SOF1YLL011W RRP9Q06506 573 aaKnown RBP4.66□□□□□ -1.66
SOF1YLL011W NFI1Q12216 726 aa4.66□□□□□ -1.66
SOF1YLL011W PDH1Q12428 516 aaKnown RBP4.66□□□□□ -1.66
SOF1YLL011W ECM3Q99252 613 aa4.66□□□□□ -1.66
SOF1YLL011W ATP2P00830 511 aaKnown RBP4.65□□□□□ -1.66
SOF1YLL011W ERG8P24521 451 aa4.65□□□□□ -1.66
SOF1YLL011W CAP1P28495 268 aaKnown RBP4.65□□□□□ -1.66
SOF1YLL011W ALY1P36117 915 aa4.65□□□□□ -1.66
SOF1YLL011W KTR3P38130 404 aaPredicted RBP4.65□□□□□ -1.66
SOF1YLL011W YEL057CP39983 233 aa4.65□□□□□ -1.66
SOF1YLL011W DJP1P40564 432 aa4.65□□□□□ -1.66
SOF1YLL011W GTS1P40956 396 aa4.65□□□□□ -1.66
SOF1YLL011W TAM41P53230 385 aa4.65□□□□□ -1.66
SOF1YLL011W NNF2P53253 936 aa4.65□□□□□ -1.66
SOF1YLL011W OGG1P53397 376 aaPredicted RBP4.65□□□□□ -1.66
Retrieved 100 of 5,963 RNA–protein pairs in 229.1 ms