RNA–Protein interactions for RNA: YKL184W

SPE1, Transcript of Ornithine decarboxylase, yeast

Gene SPE1, Length 1,401 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPE1	YKL184W	PCI8	P40512	444 aa		3.07	□□□□□ -1.92
SPE1	YKL184W	SCW4	P53334	386 aa	Known RBP	3.07	□□□□□ -1.92
SPE1	YKL184W	SNU56	Q03782	492 aa	Known RBP	3.07	□□□□□ -1.92
SPE1	YKL184W	VPS64	Q03944	604 aa		3.07	□□□□□ -1.92
SPE1	YKL184W	IOC4	Q04213	475 aa		3.07	□□□□□ -1.92
SPE1	YKL184W	CRD1	Q07560	283 aa		3.07	□□□□□ -1.92
SPE1	YKL184W	CET1	O13297	549 aa	Predicted RBP	3.06	□□□□□ -1.92
SPE1	YKL184W	YPR089W	O13585	888 aa		3.06	□□□□□ -1.92
SPE1	YKL184W	SSB1	P11484	613 aa	Known RBP	3.06	□□□□□ -1.92
SPE1	YKL184W	KGD2	P19262	463 aa	Predicted RBP	3.06	□□□□□ -1.92
SPE1	YKL184W	PRP45	P28004	379 aa	Predicted RBP	3.06	□□□□□ -1.92
SPE1	YKL184W	PRE2	P30656	287 aa	Known RBP	3.06	□□□□□ -1.92
SPE1	YKL184W	SIP1	P32578	815 aa		3.06	□□□□□ -1.92
SPE1	YKL184W	ECM32	P32644	1121 aa	Known RBP	3.06	□□□□□ -1.92
SPE1	YKL184W	RPF2	P36160	344 aa	Known RBP	3.06	□□□□□ -1.92
SPE1	YKL184W	FTH1	P38310	465 aa		3.06	□□□□□ -1.92
SPE1	YKL184W	YLF2	P38746	405 aa		3.06	□□□□□ -1.92
SPE1	YKL184W	SSB2	P40150	613 aa	Known RBP	3.06	□□□□□ -1.92
SPE1	YKL184W	YIL024C	P40543	189 aa		3.06	□□□□□ -1.92
SPE1	YKL184W	CFD1	P40558	293 aa		3.06	□□□□□ -1.92
SPE1	YKL184W	NOP2	P40991	618 aa	Known RBP	3.06	□□□□□ -1.92
SPE1	YKL184W	ASK10	P48361	1146 aa		3.06	□□□□□ -1.92
SPE1	YKL184W	YNL092W	P53934	400 aa		3.06	□□□□□ -1.92
SPE1	YKL184W	YNL034W	P53963	612 aa		3.06	□□□□□ -1.92
SPE1	YKL184W	YML119W	Q03208	357 aa		3.06	□□□□□ -1.92
SPE1	YKL184W	TRS31	Q03337	283 aa		3.06	□□□□□ -1.92
SPE1	YKL184W	CRF1	Q04930	467 aa		3.06	□□□□□ -1.92
SPE1	YKL184W	YML053C	Q04978	212 aa		3.06	□□□□□ -1.92
SPE1	YKL184W	YDL242W	Q07746	117 aa		3.06	□□□□□ -1.92
SPE1	YKL184W	AMD2	P22580	549 aa		3.05	□□□□□ -1.92
SPE1	YKL184W	YCR061W	P25639	631 aa		3.05	□□□□□ -1.92
SPE1	YKL184W	COQ3	P27680	312 aa		3.05	□□□□□ -1.92
SPE1	YKL184W	MGM1	P32266	881 aa		3.05	□□□□□ -1.92
SPE1	YKL184W	KES1	P35844	434 aa	Known RBP	3.05	□□□□□ -1.92
SPE1	YKL184W	SAP1	P39955	897 aa	Known RBP	3.05	□□□□□ -1.92
SPE1	YKL184W	SCS3	P53012	380 aa		3.05	□□□□□ -1.92
SPE1	YKL184W	CNM67	P53865	581 aa	Known RBP	3.05	□□□□□ -1.92
SPE1	YKL184W	YPL068C	Q02749	293 aa		3.05	□□□□□ -1.92
SPE1	YKL184W	YPL191C	Q08930	360 aa		3.05	□□□□□ -1.92
SPE1	YKL184W	LCB4	Q12246	624 aa		3.05	□□□□□ -1.92
SPE1	YKL184W	ILV2	P07342	687 aa	Known RBP	3.04	□□□□□ -1.92
SPE1	YKL184W	RRP43	P25359	394 aa	Predicted RBP	3.04	□□□□□ -1.92
SPE1	YKL184W	RPS7A	P26786	190 aa	Known RBP	3.04	□□□□□ -1.92
SPE1	YKL184W	ASK1	P35734	292 aa		3.04	□□□□□ -1.92
SPE1	YKL184W	ENP1	P38333	483 aa	Known RBP	3.04	□□□□□ -1.92
SPE1	YKL184W	YMR124W	P39523	943 aa	Known RBP	3.04	□□□□□ -1.92
SPE1	YKL184W	POL31	P46957	487 aa		3.04	□□□□□ -1.92
SPE1	YKL184W	COP1	P53622	1201 aa	Known RBP	3.04	□□□□□ -1.92
SPE1	YKL184W	RTC1	Q08281	1341 aa		3.04	□□□□□ -1.92
SPE1	YKL184W	PDE1	P22434	369 aa		3.03	□□□□□ -1.92
SPE1	YKL184W	MAK32	P23060	363 aa		3.03	□□□□□ -1.92
SPE1	YKL184W	MSS51	P32335	436 aa		3.03	□□□□□ -1.92
SPE1	YKL184W	SCO2	P38072	301 aa		3.03	□□□□□ -1.92
SPE1	YKL184W	VBA2	P38358	474 aa	Known RBP	3.03	□□□□□ -1.92
SPE1	YKL184W	IMD2	P38697	523 aa	Known RBP	3.03	□□□□□ -1.92
SPE1	YKL184W	ARO9	P38840	513 aa	Predicted RBP	3.03	□□□□□ -1.92
SPE1	YKL184W	FLO5	P38894	1075 aa		3.03	□□□□□ -1.92
SPE1	YKL184W	CIN1	P40987	1014 aa		3.03	□□□□□ -1.92
SPE1	YKL184W	IMD3	P50095	523 aa	Known RBP	3.03	□□□□□ -1.92
SPE1	YKL184W	YAT1	P80235	687 aa		3.03	□□□□□ -1.92
SPE1	YKL184W	ACS1	Q01574	713 aa		3.03	□□□□□ -1.92
SPE1	YKL184W	HER1	Q12276	1246 aa		3.03	□□□□□ -1.92
SPE1	YKL184W	ADH4	P10127	382 aa		3.02	□□□□□ -1.93
SPE1	YKL184W	SWD1	P39706	426 aa		3.02	□□□□□ -1.93
SPE1	YKL184W	ARB1	P40024	610 aa	Known RBP	3.02	□□□□□ -1.93
SPE1	YKL184W	STB2	P46679	850 aa		3.02	□□□□□ -1.93
SPE1	YKL184W	IRC8	P47046	822 aa		3.02	□□□□□ -1.93
SPE1	YKL184W	PUS4	P48567	403 aa	Known RBP	3.02	□□□□□ -1.93
SPE1	YKL184W	AAD4	Q07747	329 aa		3.02	□□□□□ -1.93
SPE1	YKL184W	RPT3	P33298	428 aa	Known RBP	3.02	□□□□□ -1.93
SPE1	YKL184W	VPS8	P39702	1274 aa		3.02	□□□□□ -1.93
SPE1	YKL184W	FUN12	P39730	1002 aa	Known RBP	3.02	□□□□□ -1.93
SPE1	YKL184W	UBX6	P47049	396 aa		3.02	□□□□□ -1.93
SPE1	YKL184W	ORC5	P50874	479 aa		3.02	□□□□□ -1.93
SPE1	YKL184W	TAN1	P53072	289 aa	Predicted RBP	3.02	□□□□□ -1.93
SPE1	YKL184W	YPL108W	Q02872	168 aa	Predicted RBP	3.02	□□□□□ -1.93
SPE1	YKL184W	AIM6	Q07716	390 aa		3.02	□□□□□ -1.93
SPE1	YKL184W	CIR2	Q08822	631 aa		3.02	□□□□□ -1.93
SPE1	YKL184W	LYS21	Q12122	440 aa	Known RBP	3.02	□□□□□ -1.93
SPE1	YKL184W	ARP7	Q12406	477 aa		3.02	□□□□□ -1.93
SPE1	YKL184W	SES1	P07284	462 aa	Known RBP	3.01	□□□□□ -1.93
SPE1	YKL184W	PTC6	P25646	442 aa		3.01	□□□□□ -1.93
SPE1	YKL184W	NIC96	P34077	839 aa		3.01	□□□□□ -1.93
SPE1	YKL184W	LSC1	P53598	329 aa	Known RBP	3.01	□□□□□ -1.93
SPE1	YKL184W	VTC3	Q02725	835 aa		3.01	□□□□□ -1.93
SPE1	YKL184W	ATX2	Q12067	313 aa		3.01	□□□□□ -1.93
SPE1	YKL184W	YBR255C-A	Q3E776	120 aa		3.01	□□□□□ -1.93
SPE1	YKL184W	YUR1	P26725	428 aa		3	□□□□□ -1.93
SPE1	YKL184W	TOM20	P35180	183 aa		3	□□□□□ -1.93
SPE1	YKL184W	PXL1	P36166	706 aa		3	□□□□□ -1.93
SPE1	YKL184W	CAB2	P40506	365 aa		3	□□□□□ -1.93
SPE1	YKL184W	YIR016W	P40572	265 aa		3	□□□□□ -1.93
SPE1	YKL184W	SKP2	P42843	763 aa		3	□□□□□ -1.93
SPE1	YKL184W	ESF2	P53743	316 aa	Known RBP	3	□□□□□ -1.93
SPE1	YKL184W	YNL144C	P53907	740 aa		3	□□□□□ -1.93
SPE1	YKL184W	BOP3	P53958	396 aa		3	□□□□□ -1.93
SPE1	YKL184W	ATG21	Q02887	496 aa		3	□□□□□ -1.93
SPE1	YKL184W	ARA2	Q04212	335 aa		3	□□□□□ -1.93
SPE1	YKL184W	RAD34	Q06665	692 aa		3	□□□□□ -1.93
SPE1	YKL184W	GET3	Q12154	354 aa	Known RBP	3	□□□□□ -1.93

Retrieved 100 of 5,963 RNA–protein pairs in 11.3 ms