RNA–Protein interactions for RNA: YIL123W

SIM1, Transcript of Protein of the SUN family (Sim1p, Uth1p, Nca3p, Sun4p), yeastyeast

Gene SIM1, Length 1,431 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIM1YIL123W CCT8P47079 568 aaKnown RBP11.45□□□□□ -0.58
SIM1YIL123W HST2P53686 357 aa11.45□□□□□ -0.58
SIM1YIL123W MET14Q02196 202 aa11.45□□□□□ -0.58
SIM1YIL123W ENT5Q03769 411 aaKnown RBP11.45□□□□□ -0.58
SIM1YIL123W INP2Q03824 705 aa11.45□□□□□ -0.58
SIM1YIL123W SAM3Q08986 587 aa11.45□□□□□ -0.58
SIM1YIL123W KCS1Q12494 1050 aa11.45□□□□□ -0.58
SIM1YIL123W YEL077CQ3E7X8 1277 aa11.45□□□□□ -0.58
SIM1YIL123W INO1P11986 533 aa11.44□□□□□ -0.58
SIM1YIL123W YCL068CP25593 260 aa11.44□□□□□ -0.58
SIM1YIL123W CYM1P32898 989 aa11.44□□□□□ -0.58
SIM1YIL123W TSA1P34760 196 aaKnown RBP11.44□□□□□ -0.58
SIM1YIL123W FIR1P40020 876 aa11.44□□□□□ -0.58
SIM1YIL123W YFL040WP43562 540 aa11.44□□□□□ -0.58
SIM1YIL123W NRD1P53617 575 aaKnown RBP RIP-Chip data11.44□□□□□ -0.58not detected
SIM1YIL123W YNL058CP53947 316 aa11.44□□□□□ -0.58
SIM1YIL123W YNL035CP53962 389 aaKnown RBP11.44□□□□□ -0.58
SIM1YIL123W GTR1Q00582 310 aa11.44□□□□□ -0.58
SIM1YIL123W MRI1Q06489 411 aaKnown RBP11.44□□□□□ -0.58
SIM1YIL123W SVS1Q12254 260 aa11.44□□□□□ -0.58
SIM1YIL123W PAT1P25644 796 aaKnown RBP11.43□□□□□ -0.58
SIM1YIL123W HRR25P29295 494 aaKnown RBP11.43□□□□□ -0.58
SIM1YIL123W NDI1P32340 513 aa11.43□□□□□ -0.58
SIM1YIL123W RIM1P32445 135 aaKnown RBP11.43□□□□□ -0.58
SIM1YIL123W BEM3P32873 1128 aa11.43□□□□□ -0.58
SIM1YIL123W RDH54P38086 958 aa11.43□□□□□ -0.58
SIM1YIL123W RFS1P38234 210 aaKnown RBP11.43□□□□□ -0.58
SIM1YIL123W MED8P38304 223 aa11.43□□□□□ -0.58
SIM1YIL123W YFL052WP43551 465 aa11.43□□□□□ -0.58
SIM1YIL123W CNN1P43618 361 aa11.43□□□□□ -0.58
SIM1YIL123W RTT101P47050 842 aa11.43□□□□□ -0.58
SIM1YIL123W RLI1Q03195 608 aaKnown RBP11.43□□□□□ -0.58
SIM1YIL123W CDC123Q05791 360 aa11.43□□□□□ -0.58
SIM1YIL123W YSH1Q06224 779 aaPredicted RBP11.43□□□□□ -0.58
SIM1YIL123W SWC7Q06707 132 aa11.43□□□□□ -0.58
SIM1YIL123W ALR1Q08269 859 aa11.43□□□□□ -0.58
SIM1YIL123W LDB17Q12342 491 aa11.43□□□□□ -0.58
SIM1YIL123W NOT5Q12514 560 aaPredicted RBP11.43□□□□□ -0.58
SIM1YIL123W RNA1P11745 407 aaKnown RBP11.43□□□□□ -0.58
SIM1YIL123W GAL11P19659 1081 aa11.43□□□□□ -0.58
SIM1YIL123W GCS1P35197 352 aa11.43□□□□□ -0.58
SIM1YIL123W YBR225WP38321 900 aa11.43□□□□□ -0.58
SIM1YIL123W CRP1P38845 465 aaKnown RBP11.43□□□□□ -0.58
SIM1YIL123W YJL206CP39529 758 aa11.43□□□□□ -0.58
SIM1YIL123W YPL109CQ02981 657 aa11.43□□□□□ -0.58
SIM1YIL123W RSC2Q06488 889 aa11.43□□□□□ -0.58
SIM1YIL123W SLD7Q08457 257 aa11.43□□□□□ -0.58
SIM1YIL123W RGS2Q99188 309 aa11.43□□□□□ -0.58
SIM1YIL123W RAD3P06839 778 aa11.42□□□□□ -0.58
SIM1YIL123W RPC19P28000 142 aaKnown RBP11.42□□□□□ -0.58
SIM1YIL123W DAL1P32375 460 aa11.42□□□□□ -0.58
SIM1YIL123W YKR051WP36142 418 aa11.42□□□□□ -0.58
SIM1YIL123W RIM2P38127 377 aa11.42□□□□□ -0.58
SIM1YIL123W KAP104P38217 918 aaKnown RBP11.42□□□□□ -0.58
SIM1YIL123W ROK1P45818 564 aaPredicted RBP11.42□□□□□ -0.58
SIM1YIL123W BFA1P47113 574 aa11.42□□□□□ -0.58
SIM1YIL123W YLR177WQ06251 628 aa11.42□□□□□ -0.58
SIM1YIL123W ARD1P07347 238 aaPredicted RBP11.41□□□□□ -0.58
SIM1YIL123W GCY1P14065 312 aaKnown RBP RIP-Chip data11.41□□□□□ -0.58not detected
SIM1YIL123W APE1P14904 514 aa11.41□□□□□ -0.58
SIM1YIL123W MSH2P25847 964 aa11.41□□□□□ -0.58
SIM1YIL123W HEM3P28789 327 aa11.41□□□□□ -0.58
SIM1YIL123W RRP14P36080 434 aaKnown RBP11.41□□□□□ -0.58
SIM1YIL123W ECM13P38195 257 aa11.41□□□□□ -0.58
SIM1YIL123W RFC3P38629 340 aa11.41□□□□□ -0.58
SIM1YIL123W ERP5P38819 212 aa11.41□□□□□ -0.58
SIM1YIL123W FAR3P46671 204 aa11.41□□□□□ -0.58
SIM1YIL123W DLD2P46681 530 aaKnown RBP11.41□□□□□ -0.58
SIM1YIL123W GND2P53319 492 aa11.41□□□□□ -0.58
SIM1YIL123W YMR209CQ03648 457 aa11.41□□□□□ -0.58
SIM1YIL123W TAF11Q04226 346 aa11.41□□□□□ -0.58
SIM1YIL123W AMD2P22580 549 aa11.4□□□□□ -0.58
SIM1YIL123W PGS1P25578 521 aa11.4□□□□□ -0.58
SIM1YIL123W TOA1P32773 286 aa11.4□□□□□ -0.58
SIM1YIL123W CDC27P38042 758 aa11.4□□□□□ -0.58
SIM1YIL123W SRP68P38687 599 aaKnown RBP11.4□□□□□ -0.58
SIM1YIL123W ELO3P40319 345 aa11.4□□□□□ -0.58
SIM1YIL123W ARC1P46672 376 aaKnown RBP11.4□□□□□ -0.58
SIM1YIL123W BUD32P53323 261 aa11.4□□□□□ -0.58
SIM1YIL123W SIW14P53965 281 aa11.4□□□□□ -0.58
SIM1YIL123W GCN5Q03330 439 aa11.4□□□□□ -0.58
SIM1YIL123W HER2Q03557 464 aa11.4□□□□□ -0.58
SIM1YIL123W FMN1Q03778 218 aa11.4□□□□□ -0.58
SIM1YIL123W NHX1Q04121 633 aa11.4□□□□□ -0.58
SIM1YIL123W ADY3Q07732 790 aa11.4□□□□□ -0.58
SIM1YIL123W AFI1Q99222 893 aa11.4□□□□□ -0.58
SIM1YIL123W COX5AP00424 153 aa11.39□□□□□ -0.59
SIM1YIL123W ENO2P00925 437 aaKnown RBP11.39□□□□□ -0.59
SIM1YIL123W MIS1P09440 975 aaKnown RBP11.39□□□□□ -0.59
SIM1YIL123W MAS1P10507 462 aa11.39□□□□□ -0.59
SIM1YIL123W ATP12P22135 325 aa11.39□□□□□ -0.59
SIM1YIL123W RAD27P26793 382 aa11.39□□□□□ -0.59
SIM1YIL123W GDA1P32621 518 aa11.39□□□□□ -0.59
SIM1YIL123W YSC84P32793 468 aa11.39□□□□□ -0.59
SIM1YIL123W MRS6P32864 603 aaKnown RBP11.39□□□□□ -0.59
SIM1YIL123W PIR3Q03180 325 aa11.39□□□□□ -0.59
SIM1YIL123W EXO70P19658 623 aa11.38□□□□□ -0.59
SIM1YIL123W SEC14P24280 304 aaKnown RBP11.38□□□□□ -0.59
SIM1YIL123W PHA2P32452 334 aa11.38□□□□□ -0.59
SIM1YIL123W STE13P33894 931 aa11.38□□□□□ -0.59
Retrieved 100 of 5,963 RNA–protein pairs in 14 ms