RNA–Protein interactions for RNA: YHR040W

BCD1, Essential protein required for the accumulation of box C/D snoRNA, yeastyeast

Gene BCD1, Length 1,101 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BCD1YHR040W OCT1P35999 772 aa3.64□□□□□ -1.83
BCD1YHR040W YBR238CP38330 731 aaKnown RBP3.64□□□□□ -1.83
BCD1YHR040W ERG7P38604 731 aa3.64□□□□□ -1.83
BCD1YHR040W ETP1P38748 585 aaKnown RBP3.64□□□□□ -1.83
BCD1YHR040W SAK1P38990 1142 aa3.64□□□□□ -1.83
BCD1YHR040W NDE1P40215 560 aa3.64□□□□□ -1.83
BCD1YHR040W SEC9P40357 651 aa3.64□□□□□ -1.83
BCD1YHR040W ESL1P40456 1118 aa3.64□□□□□ -1.83
BCD1YHR040W TMA108P40462 946 aa3.64□□□□□ -1.83
BCD1YHR040W QRI7P43122 407 aa3.64□□□□□ -1.83
BCD1YHR040W YFL054CP43549 646 aa3.64□□□□□ -1.83
BCD1YHR040W RET2P43621 546 aa3.64□□□□□ -1.83
BCD1YHR040W RPC17P47076 161 aa3.64□□□□□ -1.83
BCD1YHR040W HFM1P51979 1187 aa3.64□□□□□ -1.83
BCD1YHR040W VPS4P52917 437 aa3.64□□□□□ -1.83
BCD1YHR040W MTC3P53077 123 aa3.64□□□□□ -1.83
BCD1YHR040W NPY1P53164 384 aa3.64□□□□□ -1.83
BCD1YHR040W YGR117CP53270 476 aa3.64□□□□□ -1.83
BCD1YHR040W CWC22P53333 577 aaKnown RBP3.64□□□□□ -1.83
BCD1YHR040W JJJ1P53863 590 aa3.64□□□□□ -1.83
BCD1YHR040W SQS1P53866 767 aaKnown RBP3.64□□□□□ -1.83
BCD1YHR040W ESBP6P53918 673 aa3.64□□□□□ -1.83
BCD1YHR040W BOP3P53958 396 aa3.64□□□□□ -1.83
BCD1YHR040W ORC3P54790 616 aa3.64□□□□□ -1.83
BCD1YHR040W ECM9Q02202 377 aa3.64□□□□□ -1.83
BCD1YHR040W VTC3Q02725 835 aa3.64□□□□□ -1.83
BCD1YHR040W SKY1Q03656 742 aa3.64□□□□□ -1.83
BCD1YHR040W TRS130Q03660 1102 aa3.64□□□□□ -1.83
BCD1YHR040W YMR018WQ04364 514 aa3.64□□□□□ -1.83
BCD1YHR040W NOP6Q07623 225 aaKnown RBP3.64□□□□□ -1.83
BCD1YHR040W SMC5Q08204 1093 aa3.64□□□□□ -1.83
BCD1YHR040W MET7Q08645 548 aa3.64□□□□□ -1.83
BCD1YHR040W YOR352WQ08816 343 aa3.64□□□□□ -1.83
BCD1YHR040W ACM1Q08981 209 aa3.64□□□□□ -1.83
BCD1YHR040W YPL277CQ08989 487 aa3.64□□□□□ -1.83
BCD1YHR040W LPX1Q12405 387 aaKnown RBP3.64□□□□□ -1.83
BCD1YHR040W APM4Q99186 491 aa3.64□□□□□ -1.83
BCD1YHR040W DFG16Q99234 619 aa3.64□□□□□ -1.83
BCD1YHR040W YMR084WA2P2R3 262 aa3.63□□□□□ -1.83
BCD1YHR040W TUB2P02557 457 aaKnown RBP3.63□□□□□ -1.83
BCD1YHR040W RPB2P08518 1224 aaKnown RBP3.63□□□□□ -1.83
BCD1YHR040W HPR1P17629 752 aaKnown RBP3.63□□□□□ -1.83
BCD1YHR040W RAD57P25301 460 aa3.63□□□□□ -1.83
BCD1YHR040W DEP1P31385 405 aa3.63□□□□□ -1.83
BCD1YHR040W XRS2P33301 854 aa3.63□□□□□ -1.83
BCD1YHR040W TFC3P34111 1160 aa3.63□□□□□ -1.83
BCD1YHR040W RPC25P35718 212 aa3.63□□□□□ -1.83
BCD1YHR040W MUD2P36084 527 aaKnown RBP3.63□□□□□ -1.83
BCD1YHR040W RPC37P36121 282 aa3.63□□□□□ -1.83
BCD1YHR040W PHO88P38264 188 aaPredicted RBP3.63□□□□□ -1.83
BCD1YHR040W ECL1P48235 211 aa3.63□□□□□ -1.83
BCD1YHR040W NIT3P49954 291 aa3.63□□□□□ -1.83
BCD1YHR040W SHE10P53075 577 aa3.63□□□□□ -1.83
BCD1YHR040W MDR1P53258 950 aa3.63□□□□□ -1.83
BCD1YHR040W BTN2P53286 410 aa3.63□□□□□ -1.83
BCD1YHR040W RPL22BP56628 122 aaKnown RBP3.63□□□□□ -1.83
BCD1YHR040W MRS2Q01926 470 aa3.63□□□□□ -1.83
BCD1YHR040W NGL3Q03210 505 aa3.63□□□□□ -1.83
BCD1YHR040W RRB1Q04225 511 aaKnown RBP3.63□□□□□ -1.83
BCD1YHR040W VTI1Q04338 217 aa3.63□□□□□ -1.83
BCD1YHR040W YDR514CQ04408 483 aa3.63□□□□□ -1.83
BCD1YHR040W SOV1Q04748 898 aa3.63□□□□□ -1.83
BCD1YHR040W DON1Q05610 365 aa3.63□□□□□ -1.83
BCD1YHR040W YLR297WQ05899 129 aa3.63□□□□□ -1.83
BCD1YHR040W ENV7Q12003 364 aa3.63□□□□□ -1.83
BCD1YHR040W CWC2Q12046 339 aaPredicted RBP3.63□□□□□ -1.83
BCD1YHR040W SVS1Q12254 260 aa3.63□□□□□ -1.83
BCD1YHR040W ARP6Q12509 438 aa3.63□□□□□ -1.83
BCD1YHR040W FLO11P08640 1367 aa3.63□□□□□ -1.83
BCD1YHR040W CBP1P07252 654 aa3.62□□□□□ -1.83
BCD1YHR040W PRP22P24384 1145 aaKnown RBP3.62□□□□□ -1.83
BCD1YHR040W DBP2P24783 546 aaKnown RBP3.62□□□□□ -1.83
BCD1YHR040W CLB1P24868 471 aa3.62□□□□□ -1.83
BCD1YHR040W NPP1P25353 742 aa3.62□□□□□ -1.83
BCD1YHR040W YSC83P32792 385 aa3.62□□□□□ -1.83
BCD1YHR040W LRG1P35688 1017 aa3.62□□□□□ -1.83
BCD1YHR040W YKR078WP36158 585 aaKnown RBP3.62□□□□□ -1.83
BCD1YHR040W SPP381P38282 291 aaPredicted RBP3.62□□□□□ -1.83
BCD1YHR040W PIH1P38768 344 aa3.62□□□□□ -1.83
BCD1YHR040W SMF1P38925 575 aa3.62□□□□□ -1.83
BCD1YHR040W FIS1P40515 155 aa3.62□□□□□ -1.83
BCD1YHR040W GPD2P41911 440 aaKnown RBP3.62□□□□□ -1.83
BCD1YHR040W AVT1P47082 602 aa3.62□□□□□ -1.83
BCD1YHR040W YJR039WP47107 1121 aa3.62□□□□□ -1.83
BCD1YHR040W NBP1P52919 319 aaPredicted RBP3.62□□□□□ -1.83
BCD1YHR040W KAP114P53067 1004 aa3.62□□□□□ -1.83
BCD1YHR040W AIM14P53109 570 aa3.62□□□□□ -1.83
BCD1YHR040W RRT6P53117 311 aaPredicted RBP3.62□□□□□ -1.83
BCD1YHR040W NCS2P53923 493 aaPredicted RBP3.62□□□□□ -1.83
BCD1YHR040W ORC4P54791 529 aa3.62□□□□□ -1.83
BCD1YHR040W GTR1Q00582 310 aa3.62□□□□□ -1.83
BCD1YHR040W YML037CQ03703 340 aa3.62□□□□□ -1.83
BCD1YHR040W RSM24Q03976 319 aa3.62□□□□□ -1.83
BCD1YHR040W NHX1Q04121 633 aa3.62□□□□□ -1.83
BCD1YHR040W YMR114CQ04471 368 aaKnown RBP3.62□□□□□ -1.83
BCD1YHR040W YDR338CQ05497 695 aa3.62□□□□□ -1.83
BCD1YHR040W STE23Q06010 1027 aa3.62□□□□□ -1.83
BCD1YHR040W MLH2Q07980 695 aa3.62□□□□□ -1.83
BCD1YHR040W YDR056CQ12025 205 aa3.62□□□□□ -1.83
BCD1YHR040W YPR027CQ12079 277 aa3.62□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 38.6 ms