RNA–Protein interactions for RNA: YGR006W

PRP18, Transcript of Splicing factor and component of snRNP U5, yeastyeast

Gene PRP18, Length 756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP18YGR006W ICL2Q12031 575 aa4.36□□□□□ -1.71
PRP18YGR006W RPL7BQ12213 244 aaKnown RBP4.36□□□□□ -1.71
PRP18YGR006W YER175W-AQ8TGU4 54 aa4.36□□□□□ -1.71
PRP18YGR006W KGD2P19262 463 aaPredicted RBP4.35□□□□□ -1.71
PRP18YGR006W PDE1P22434 369 aa4.35□□□□□ -1.71
PRP18YGR006W SWI4P25302 1093 aaKnown RBP4.35□□□□□ -1.71
PRP18YGR006W ARP2P32381 391 aaKnown RBP4.35□□□□□ -1.71
PRP18YGR006W PPZ2P33329 710 aa4.35□□□□□ -1.71
PRP18YGR006W PSF2P40359 213 aa4.35□□□□□ -1.71
PRP18YGR006W WAR1Q03631 944 aa4.35□□□□□ -1.71
PRP18YGR006W ARG7Q04728 441 aa4.35□□□□□ -1.71
PRP18YGR006W ULA1Q12059 462 aa4.35□□□□□ -1.71
PRP18YGR006W YBR255C-AQ3E776 120 aa4.35□□□□□ -1.71
PRP18YGR006W SSM4P40318 1319 aa4.35□□□□□ -1.71
PRP18YGR006W CHO2P05374 869 aaKnown RBP4.34□□□□□ -1.71
PRP18YGR006W NUC1P08466 329 aa4.34□□□□□ -1.71
PRP18YGR006W PET122P10355 254 aa4.34□□□□□ -1.71
PRP18YGR006W MTF2P10849 440 aa4.34□□□□□ -1.71
PRP18YGR006W NCP1P16603 691 aaKnown RBP4.34□□□□□ -1.71
PRP18YGR006W YMC1P32331 307 aa4.34□□□□□ -1.71
PRP18YGR006W GCD7P32502 381 aaPredicted RBP4.34□□□□□ -1.71
PRP18YGR006W YBR138CP38277 524 aa4.34□□□□□ -1.71
PRP18YGR006W SMK1P41808 388 aa4.34□□□□□ -1.71
PRP18YGR006W ERR3P42222 437 aa4.34□□□□□ -1.71
PRP18YGR006W SKP2P42843 763 aa4.34□□□□□ -1.71
PRP18YGR006W BST1P43571 1029 aa4.34□□□□□ -1.71
PRP18YGR006W ARC35P53731 342 aaKnown RBP4.34□□□□□ -1.71
PRP18YGR006W MRN1Q08925 612 aaKnown RBP RIP-Chip data4.34□□□□□ -1.71not detected
PRP18YGR006W LEU2P04173 364 aaPredicted RBP4.33□□□□□ -1.72
PRP18YGR006W TUB1P09733 447 aaKnown RBP4.33□□□□□ -1.72
PRP18YGR006W HEM1P09950 548 aaPredicted RBP4.33□□□□□ -1.72
PRP18YGR006W AAD3P25612 363 aa4.33□□□□□ -1.72
PRP18YGR006W PSY4P38193 441 aa4.33□□□□□ -1.72
PRP18YGR006W ARO9P38840 513 aaPredicted RBP4.33□□□□□ -1.72
PRP18YGR006W MTG2P38860 518 aa4.33□□□□□ -1.72
PRP18YGR006W YFL015CP43578 164 aa4.33□□□□□ -1.72
PRP18YGR006W COG2P53271 262 aa4.33□□□□□ -1.72
PRP18YGR006W YNL092WP53934 400 aa4.33□□□□□ -1.72
PRP18YGR006W ARO10Q06408 635 aa4.33□□□□□ -1.72
PRP18YGR006W UBC1P21734 215 aaKnown RBP4.32□□□□□ -1.72
PRP18YGR006W RPC34P32910 317 aa4.32□□□□□ -1.72
PRP18YGR006W IML2P47031 731 aa4.32□□□□□ -1.72
PRP18YGR006W UBP16Q02863 499 aa4.32□□□□□ -1.72
PRP18YGR006W FMP30Q02883 468 aa4.32□□□□□ -1.72
PRP18YGR006W SUL2Q12325 893 aa4.32□□□□□ -1.72
PRP18YGR006W AHA1Q12449 350 aaKnown RBP4.32□□□□□ -1.72
PRP18YGR006W AMD2P22580 549 aa4.31□□□□□ -1.72
PRP18YGR006W RAD16P31244 790 aa4.31□□□□□ -1.72
PRP18YGR006W SIP1P32578 815 aa4.31□□□□□ -1.72
PRP18YGR006W GDA1P32621 518 aa4.31□□□□□ -1.72
PRP18YGR006W NUP120P35729 1037 aa4.31□□□□□ -1.72
PRP18YGR006W RPF2P36160 344 aaKnown RBP4.31□□□□□ -1.72
PRP18YGR006W EXO84P38261 753 aa4.31□□□□□ -1.72
PRP18YGR006W RIX1P38883 763 aaPredicted RBP4.31□□□□□ -1.72
PRP18YGR006W TDA10P42938 290 aa4.31□□□□□ -1.72
PRP18YGR006W ZAP1P47043 880 aa4.31□□□□□ -1.72
PRP18YGR006W YNL058CP53947 316 aa4.31□□□□□ -1.72
PRP18YGR006W GTR1Q00582 310 aa4.31□□□□□ -1.72
PRP18YGR006W AAT1Q01802 451 aa4.31□□□□□ -1.72
PRP18YGR006W MTG1Q03151 367 aaPredicted RBP4.31□□□□□ -1.72
PRP18YGR006W ECM16Q04217 1267 aaKnown RBP4.31□□□□□ -1.72
PRP18YGR006W CSR1Q06705 408 aaKnown RBP4.31□□□□□ -1.72
PRP18YGR006W YDL242WQ07746 117 aa4.31□□□□□ -1.72
PRP18YGR006W PCL8Q08966 492 aa4.31□□□□□ -1.72
PRP18YGR006W LCB4Q12246 624 aa4.31□□□□□ -1.72
PRP18YGR006W RVB2Q12464 471 aaKnown RBP4.31□□□□□ -1.72
PRP18YGR006W BEM3P32873 1128 aa4.3□□□□□ -1.72
PRP18YGR006W UME6P39001 836 aa4.3□□□□□ -1.72
PRP18YGR006W YML119WQ03208 357 aa4.3□□□□□ -1.72
PRP18YGR006W RAD33Q04231 177 aa4.3□□□□□ -1.72
PRP18YGR006W GTB1Q04924 702 aa4.3□□□□□ -1.72
PRP18YGR006W TPK1P06244 397 aa4.29□□□□□ -1.72
PRP18YGR006W PFK2P16862 959 aaKnown RBP RIP-Chip data4.29□□□□□ -1.72not detected
PRP18YGR006W URK1P27515 501 aa4.29□□□□□ -1.72
PRP18YGR006W RPT3P33298 428 aaKnown RBP4.29□□□□□ -1.72
PRP18YGR006W APD1P38281 316 aa4.29□□□□□ -1.72
PRP18YGR006W VPS8P39702 1274 aa4.29□□□□□ -1.72
PRP18YGR006W FUN12P39730 1002 aaKnown RBP4.29□□□□□ -1.72
PRP18YGR006W EXO1P39875 702 aa4.29□□□□□ -1.72
PRP18YGR006W CIR1P42940 261 aa4.29□□□□□ -1.72
PRP18YGR006W CTF18P49956 741 aa4.29□□□□□ -1.72
PRP18YGR006W TAM41P53230 385 aa4.29□□□□□ -1.72
PRP18YGR006W YML131WQ03102 365 aa4.29□□□□□ -1.72
PRP18YGR006W PLM2Q04383 521 aa4.29□□□□□ -1.72
PRP18YGR006W MRI1Q06489 411 aaKnown RBP4.29□□□□□ -1.72
PRP18YGR006W ATG23Q06671 453 aa4.29□□□□□ -1.72
PRP18YGR006W VAM6Q07468 1049 aa4.29□□□□□ -1.72
PRP18YGR006W YPL191CQ08930 360 aa4.29□□□□□ -1.72
PRP18YGR006W PNO1Q99216 274 aaKnown RBP4.29□□□□□ -1.72
PRP18YGR006W TAD3Q9URQ3 322 aa4.29□□□□□ -1.72
PRP18YGR006W BNR1P40450 1375 aa4.28□□□□□ -1.72
PRP18YGR006W SPO16P17122 198 aa4.28□□□□□ -1.72
PRP18YGR006W YJU2P28320 278 aaPredicted RBP4.28□□□□□ -1.72
PRP18YGR006W SSH4P32343 579 aa4.28□□□□□ -1.72
PRP18YGR006W KAP123P40069 1113 aaKnown RBP4.28□□□□□ -1.72
PRP18YGR006W YJL043WP47053 257 aa4.28□□□□□ -1.72
PRP18YGR006W YML053CQ04978 212 aa4.28□□□□□ -1.72
PRP18YGR006W AI5_ALPHAQ9ZZX1 630 aa4.28□□□□□ -1.72
PRP18YGR006W SEC3P33332 1336 aaKnown RBP4.27□□□□□ -1.73
PRP18YGR006W RRP43P25359 394 aaPredicted RBP4.27□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 65.3 ms