RNA–Protein interactions for RNA: YDR339C

FCF1, Transcript of Putative PINc domain nuclease, yeast

Gene FCF1, Length 570 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
FCF1	YDR339C	PCK1	P10963	549 aa		4.19	□□□□□ -1.74
FCF1	YDR339C	SEC15	P22224	910 aa		4.19	□□□□□ -1.74
FCF1	YDR339C	KIN82	P25341	720 aa		4.19	□□□□□ -1.74
FCF1	YDR339C	YHR033W	P38690	423 aa		4.19	□□□□□ -1.74
FCF1	YDR339C	STT3	P39007	718 aa	Known RBP	4.19	□□□□□ -1.74
FCF1	YDR339C	BDH2	P39713	417 aa		4.19	□□□□□ -1.74
FCF1	YDR339C	PUG1	P40100	303 aa		4.19	□□□□□ -1.74
FCF1	YDR339C	ESL1	P40456	1118 aa		4.19	□□□□□ -1.74
FCF1	YDR339C	MNT2	P53059	558 aa		4.19	□□□□□ -1.74
FCF1	YDR339C	MDR1	P53258	950 aa		4.19	□□□□□ -1.74
FCF1	YDR339C	ARC35	P53731	342 aa	Known RBP	4.19	□□□□□ -1.74
FCF1	YDR339C	MOT3	P54785	490 aa	Known RBP	4.19	□□□□□ -1.74
FCF1	YDR339C	DIA2	Q08496	732 aa	Predicted RBP	4.19	□□□□□ -1.74
FCF1	YDR339C	ENT1	Q12518	454 aa		4.19	□□□□□ -1.74
FCF1	YDR339C	HRP1	Q99383	534 aa	Known RBP	4.19	□□□□□ -1.74
FCF1	YDR339C	ESC1	Q03661	1658 aa	Known RBP	4.19	□□□□□ -1.74
FCF1	YDR339C	FOB1	O13329	566 aa		4.18	□□□□□ -1.74
FCF1	YDR339C	RPN13	O13563	156 aa		4.18	□□□□□ -1.74
FCF1	YDR339C	HOM2	P13663	365 aa	Known RBP	4.18	□□□□□ -1.74
FCF1	YDR339C	POL3	P15436	1097 aa		4.18	□□□□□ -1.74
FCF1	YDR339C	CLB4	P24871	460 aa		4.18	□□□□□ -1.74
FCF1	YDR339C	ORC2	P32833	620 aa		4.18	□□□□□ -1.74
FCF1	YDR339C	BLI1	P35727	113 aa		4.18	□□□□□ -1.74
FCF1	YDR339C	PRM2	P40534	656 aa		4.18	□□□□□ -1.74
FCF1	YDR339C	IMA5	P40884	581 aa		4.18	□□□□□ -1.74
FCF1	YDR339C	MAD2	P40958	196 aa		4.18	□□□□□ -1.74
FCF1	YDR339C	CTF18	P49956	741 aa		4.18	□□□□□ -1.74
FCF1	YDR339C	ATG4	P53867	494 aa		4.18	□□□□□ -1.74
FCF1	YDR339C	LEE1	Q02799	301 aa	Known RBP	4.18	□□□□□ -1.74
FCF1	YDR339C	HMO1	Q03973	246 aa	Known RBP	4.18	□□□□□ -1.74
FCF1	YDR339C	VID22	Q05934	901 aa		4.18	□□□□□ -1.74
FCF1	YDR339C	AAD4	Q07747	329 aa		4.18	□□□□□ -1.74
FCF1	YDR339C	AIM41	Q12032	185 aa		4.18	□□□□□ -1.74
FCF1	YDR339C	NBP2	Q12163	236 aa		4.18	□□□□□ -1.74
FCF1	YDR339C	DBP10	Q12389	995 aa	Known RBP	4.18	□□□□□ -1.74
FCF1	YDR339C	GDB1	Q06625	1536 aa		4.17	□□□□□ -1.74
FCF1	YDR339C	SEM1	O94742	89 aa		4.17	□□□□□ -1.74
FCF1	YDR339C	PCT1	P13259	424 aa		4.17	□□□□□ -1.74
FCF1	YDR339C	SWC3	P31376	625 aa		4.17	□□□□□ -1.74
FCF1	YDR339C	PAH1	P32567	862 aa		4.17	□□□□□ -1.74
FCF1	YDR339C	TEF4	P36008	412 aa	Known RBP	4.17	□□□□□ -1.74
FCF1	YDR339C	ESL2	P36168	1195 aa		4.17	□□□□□ -1.74
FCF1	YDR339C	NOP4	P37838	685 aa	Known RBP	4.17	□□□□□ -1.74
FCF1	YDR339C	FSH1	P38777	243 aa	Known RBP	4.17	□□□□□ -1.74
FCF1	YDR339C	VPS8	P39702	1274 aa		4.17	□□□□□ -1.74
FCF1	YDR339C	IMA1	P53051	589 aa		4.17	□□□□□ -1.74
FCF1	YDR339C	COX18	P53239	316 aa		4.17	□□□□□ -1.74
FCF1	YDR339C	YNR071C	P53757	342 aa		4.17	□□□□□ -1.74
FCF1	YDR339C	YDL144C	Q07589	356 aa		4.17	□□□□□ -1.74
FCF1	YDR339C	SDH5	Q08230	162 aa		4.17	□□□□□ -1.74
FCF1	YDR339C	OSW1	Q08692	278 aa		4.17	□□□□□ -1.74
FCF1	YDR339C	RTK1	Q12100	620 aa	Predicted RBP	4.17	□□□□□ -1.74
FCF1	YDR339C	USV1	Q12132	391 aa		4.17	□□□□□ -1.74
FCF1	YDR339C	RPS9B	P05755	195 aa	Known RBP	4.16	□□□□□ -1.74
FCF1	YDR339C	FUM1	P08417	488 aa	Known RBP	4.16	□□□□□ -1.74
FCF1	YDR339C	SEC12	P11655	471 aa		4.16	□□□□□ -1.74
FCF1	YDR339C	IME1	P21190	360 aa		4.16	□□□□□ -1.74
FCF1	YDR339C	VPS34	P22543	875 aa		4.16	□□□□□ -1.74
FCF1	YDR339C	TFC3	P34111	1160 aa		4.16	□□□□□ -1.74
FCF1	YDR339C	PAC2	P39937	518 aa		4.16	□□□□□ -1.74
FCF1	YDR339C	CAB2	P40506	365 aa		4.16	□□□□□ -1.74
FCF1	YDR339C	BUD8	P41698	603 aa		4.16	□□□□□ -1.74
FCF1	YDR339C	BIT61	P47041	543 aa		4.16	□□□□□ -1.74
FCF1	YDR339C	SEC5	P89102	971 aa		4.16	□□□□□ -1.74
FCF1	YDR339C	RIM13	Q03792	727 aa		4.16	□□□□□ -1.74
FCF1	YDR339C	YCG1	Q06680	1035 aa		4.16	□□□□□ -1.74
FCF1	YDR339C	IMH1	Q06704	911 aa	Known RBP	4.16	□□□□□ -1.74
FCF1	YDR339C	DIN7	Q12086	430 aa		4.16	□□□□□ -1.74
FCF1	YDR339C	SCM3	Q12334	223 aa		4.16	□□□□□ -1.74
FCF1	YDR339C	ZRT2	Q12436	422 aa		4.16	□□□□□ -1.74
FCF1	YDR339C	POM34	Q12445	299 aa		4.16	□□□□□ -1.74
FCF1	YDR339C	NOP58	Q12499	511 aa	Known RBP	4.16	□□□□□ -1.74
FCF1	YDR339C	RTC1	Q08281	1341 aa		4.16	□□□□□ -1.74
FCF1	YDR339C	TY1B-DR3	Q99231	1755 aa		4.15	□□□□□ -1.74
FCF1	YDR339C	SNF1	P06782	633 aa	Known RBP	4.15	□□□□□ -1.75
FCF1	YDR339C	BIK1	P11709	440 aa		4.15	□□□□□ -1.75
FCF1	YDR339C	HMG2	P12684	1045 aa		4.15	□□□□□ -1.75
FCF1	YDR339C	THR1	P17423	357 aa	Known RBP	4.15	□□□□□ -1.75
FCF1	YDR339C	MSP1	P28737	362 aa		4.15	□□□□□ -1.75
FCF1	YDR339C	NFU1	P32860	256 aa		4.15	□□□□□ -1.75
FCF1	YDR339C	CNS1	P33313	385 aa		4.15	□□□□□ -1.75
FCF1	YDR339C	SET3	P36124	751 aa		4.15	□□□□□ -1.75
FCF1	YDR339C	YER010C	P40011	234 aa		4.15	□□□□□ -1.75
FCF1	YDR339C	GET2	P40056	285 aa		4.15	□□□□□ -1.75
FCF1	YDR339C	KHA1	P40309	873 aa		4.15	□□□□□ -1.75
FCF1	YDR339C	RIC1	P40395	1056 aa		4.15	□□□□□ -1.75
FCF1	YDR339C	BUD27	P43573	796 aa	Known RBP RIP-Chip data	4.15	□□□□□ -1.75	not detected
FCF1	YDR339C	VTC2	P43585	828 aa		4.15	□□□□□ -1.75
FCF1	YDR339C	SGM1	P47166	707 aa		4.15	□□□□□ -1.75
FCF1	YDR339C	CBK1	P53894	756 aa		4.15	□□□□□ -1.75
FCF1	YDR339C	ATG21	Q02887	496 aa		4.15	□□□□□ -1.75
FCF1	YDR339C	FCP1	Q03254	732 aa		4.15	□□□□□ -1.75
FCF1	YDR339C	LSP1	Q12230	341 aa	Known RBP	4.15	□□□□□ -1.75
FCF1	YDR339C	EDE1	P34216	1381 aa		4.14	□□□□□ -1.75
FCF1	YDR339C	ARO1	P08566	1588 aa	Known RBP	4.14	□□□□□ -1.75
FCF1	YDR339C	IQG1	Q12280	1495 aa		4.14	□□□□□ -1.75
FCF1	YDR339C	CTT1	P06115	562 aa		4.14	□□□□□ -1.75
FCF1	YDR339C	NCP1	P16603	691 aa	Known RBP	4.14	□□□□□ -1.75
FCF1	YDR339C	BET2	P20133	325 aa		4.14	□□□□□ -1.75
FCF1	YDR339C	RNR1	P21524	888 aa	Known RBP	4.14	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 15.5 ms