RNA–Protein interactions for RNA: YBR074W

PFF1, Transcript of Multi-spanning vacuolar membrane protease, yeastyeast

Gene PFF1, Length 2,931 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PFF1YBR074W UBA1P22515 1024 aaKnown RBP2.84□□□□□ -1.96
PFF1YBR074W ADP1P25371 1049 aa2.84□□□□□ -1.96
PFF1YBR074W EFT1P32324 842 aaKnown RBP2.84□□□□□ -1.96
PFF1YBR074W SIP2P34164 415 aaKnown RBP2.84□□□□□ -1.96
PFF1YBR074W YPK3P38070 525 aa2.84□□□□□ -1.96
PFF1YBR074W YRO2P38079 344 aa2.84□□□□□ -1.96
PFF1YBR074W YBR241CP38142 488 aa2.84□□□□□ -1.96
PFF1YBR074W FAA3P39002 694 aa2.84□□□□□ -1.96
PFF1YBR074W CCT6P39079 546 aa2.84□□□□□ -1.96
PFF1YBR074W LCP5P40079 357 aaPredicted RBP2.84□□□□□ -1.96
PFF1YBR074W GCD14P46959 383 aaPredicted RBP2.84□□□□□ -1.96
PFF1YBR074W LIA1P47120 325 aaKnown RBP2.84□□□□□ -1.96
PFF1YBR074W RFX1P48743 811 aa2.84□□□□□ -1.96
PFF1YBR074W YPT32P51996 222 aaKnown RBP2.84□□□□□ -1.96
PFF1YBR074W OYE2Q03558 400 aaKnown RBP2.84□□□□□ -1.96
PFF1YBR074W ATG16Q03818 150 aa2.84□□□□□ -1.96
PFF1YBR074W YDL121CQ07541 149 aa2.84□□□□□ -1.96
PFF1YBR074W YLR031WQ07978 186 aa2.84□□□□□ -1.96
PFF1YBR074W YOL019WQ08157 551 aa2.84□□□□□ -1.96
PFF1YBR074W CFT2Q12102 859 aaPredicted RBP2.84□□□□□ -1.96
PFF1YBR074W RRP36Q12481 300 aaPredicted RBP2.84□□□□□ -1.96
PFF1YBR074W DED1P06634 604 aaKnown RBP2.83□□□□□ -1.96
PFF1YBR074W CMD1P06787 147 aaKnown RBP2.83□□□□□ -1.96
PFF1YBR074W GCN3P14741 305 aa2.83□□□□□ -1.96
PFF1YBR074W MAK31P23059 88 aa2.83□□□□□ -1.96
PFF1YBR074W SRO9P25567 434 aaKnown RBP2.83□□□□□ -1.96
PFF1YBR074W MSH2P25847 964 aa2.83□□□□□ -1.96
PFF1YBR074W VMA6P32366 345 aaKnown RBP2.83□□□□□ -1.96
PFF1YBR074W HCS1P34243 683 aa2.83□□□□□ -1.96
PFF1YBR074W MRX3P38172 270 aa2.83□□□□□ -1.96
PFF1YBR074W YBR225WP38321 900 aa2.83□□□□□ -1.96
PFF1YBR074W YBR259WP38338 688 aa2.83□□□□□ -1.96
PFF1YBR074W MET18P40469 1032 aa2.83□□□□□ -1.96
PFF1YBR074W IRC8P47046 822 aa2.83□□□□□ -1.96
PFF1YBR074W ALT1P52893 592 aa2.83□□□□□ -1.96
PFF1YBR074W PAN2P53010 1115 aaPredicted RBP2.83□□□□□ -1.96
PFF1YBR074W MCM6P53091 1017 aaKnown RBP2.83□□□□□ -1.96
PFF1YBR074W PUS2P53167 370 aa2.83□□□□□ -1.96
PFF1YBR074W RNH1Q04740 348 aa2.83□□□□□ -1.96
PFF1YBR074W BRE4Q07660 1125 aa2.83□□□□□ -1.96
PFF1YBR074W CWC2Q12046 339 aaPredicted RBP2.83□□□□□ -1.96
PFF1YBR074W FAP7Q12055 197 aaPredicted RBP2.83□□□□□ -1.96
PFF1YBR074W RRI2Q12348 645 aa2.83□□□□□ -1.96
PFF1YBR074W TRM11Q12463 433 aa2.83□□□□□ -1.96
PFF1YBR074W NBL1Q3E7Y6 73 aa2.83□□□□□ -1.96
PFF1YBR074W GCR1P07261 785 aa2.83□□□□□ -1.96
PFF1YBR074W COQ1P18900 473 aa2.83□□□□□ -1.96
PFF1YBR074W RAD14P28519 371 aa2.83□□□□□ -1.96
PFF1YBR074W UGA4P32837 571 aa2.83□□□□□ -1.96
PFF1YBR074W KDX1P36005 433 aa2.83□□□□□ -1.96
PFF1YBR074W CUE2P36075 443 aaKnown RBP2.83□□□□□ -1.96
PFF1YBR074W NTR2P36118 322 aaPredicted RBP2.83□□□□□ -1.96
PFF1YBR074W YKR073CP36153 106 aa2.83□□□□□ -1.96
PFF1YBR074W SEC31P38968 1273 aaKnown RBP2.83□□□□□ -1.96
PFF1YBR074W SAH1P39954 449 aaKnown RBP2.83□□□□□ -1.96
PFF1YBR074W PDS1P40316 373 aaPredicted RBP2.83□□□□□ -1.96
PFF1YBR074W AGP3P43548 558 aa2.83□□□□□ -1.96
PFF1YBR074W ARC1P46672 376 aaKnown RBP2.83□□□□□ -1.96
PFF1YBR074W DAS1P47005 663 aa2.83□□□□□ -1.96
PFF1YBR074W COS5P47187 383 aa2.83□□□□□ -1.96
PFF1YBR074W YTP1P53584 459 aa2.83□□□□□ -1.96
PFF1YBR074W NPL3Q01560 414 aaKnown RBP RIP-Chip data2.83□□□□□ -1.96not detected
PFF1YBR074W DIG1Q03063 452 aaKnown RBP2.83□□□□□ -1.96
PFF1YBR074W ATG13Q06628 738 aa2.83□□□□□ -1.96
PFF1YBR074W MRL1Q06815 381 aa2.83□□□□□ -1.96
PFF1YBR074W ALE1Q08548 619 aa2.83□□□□□ -1.96
PFF1YBR074W PUS7Q08647 676 aaKnown RBP2.83□□□□□ -1.96
PFF1YBR074W TRE1Q08919 783 aa2.83□□□□□ -1.96
PFF1YBR074W UIP4Q08926 304 aa2.83□□□□□ -1.96
PFF1YBR074W YOR289WQ12012 251 aaPredicted RBP2.83□□□□□ -1.96
PFF1YBR074W HER1Q12276 1246 aa2.83□□□□□ -1.96
PFF1YBR074W HRT3Q12347 344 aa2.83□□□□□ -1.96
PFF1YBR074W ZRT2Q12436 422 aa2.83□□□□□ -1.96
PFF1YBR074W SPE4Q12455 300 aa2.83□□□□□ -1.96
PFF1YBR074W YLR462WO13556 202 aa2.82□□□□□ -1.96
PFF1YBR074W THR1P17423 357 aaKnown RBP2.82□□□□□ -1.96
PFF1YBR074W VPS3P23643 1011 aa2.82□□□□□ -1.96
PFF1YBR074W RPC19P28000 142 aaKnown RBP2.82□□□□□ -1.96
PFF1YBR074W YJU2P28320 278 aaPredicted RBP2.82□□□□□ -1.96
PFF1YBR074W SAC6P32599 642 aaKnown RBP2.82□□□□□ -1.96
PFF1YBR074W ANP1P32629 500 aa2.82□□□□□ -1.96
PFF1YBR074W ETR1P38071 380 aa2.82□□□□□ -1.96
PFF1YBR074W STP2P38704 541 aa2.82□□□□□ -1.96
PFF1YBR074W YHL049CP38722 271 aa2.82□□□□□ -1.96
PFF1YBR074W RPH1P39956 796 aa2.82□□□□□ -1.96
PFF1YBR074W YEL075CP39972 122 aa2.82□□□□□ -1.96
PFF1YBR074W YER189WP40104 122 aa2.82□□□□□ -1.96
PFF1YBR074W YFL064CP43540 174 aa2.82□□□□□ -1.96
PFF1YBR074W UBP6P43593 499 aaKnown RBP2.82□□□□□ -1.96
PFF1YBR074W YJR107WP47145 328 aa2.82□□□□□ -1.96
PFF1YBR074W ENT3P47160 408 aa2.82□□□□□ -1.96
PFF1YBR074W NUP84P52891 726 aa2.82□□□□□ -1.96
PFF1YBR074W YGR125WP53273 1036 aa2.82□□□□□ -1.96
PFF1YBR074W COG6P53959 839 aa2.82□□□□□ -1.96
PFF1YBR074W UTP6Q02354 440 aaKnown RBP2.82□□□□□ -1.96
PFF1YBR074W YPR196WQ06595 470 aa2.82□□□□□ -1.96
PFF1YBR074W YLR413WQ06689 675 aa2.82□□□□□ -1.96
PFF1YBR074W FAL1Q12099 399 aaKnown RBP2.82□□□□□ -1.96
PFF1YBR074W YRM1Q12340 786 aa2.82□□□□□ -1.96
PFF1YBR074W YBL111CQ3E7Y5 667 aa2.82□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 12.4 ms