RNA–Protein interactions for RNA: ENSMUST00000026740.5

Col7a1-201, Transcript of Collagen alpha-1(VII) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col7a1, Length 9,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1-201ENSMUST00000026740 Atp5g1Q9CR84 136 aa11.6□□□□□ -0.55
Col7a1-201ENSMUST00000026740 Gm12169F2Z474 250 aa11.6□□□□□ -0.55
Col7a1-201ENSMUST00000026740 Pde6gP09174 87 aa11.6□□□□□ -0.55
Col7a1-201ENSMUST00000026740 Ube2bP63147 152 aa11.6□□□□□ -0.55
Col7a1-201ENSMUST00000026740 Ndufa12Q7TMF3 145 aaKnown RBP11.6□□□□□ -0.55
Col7a1-201ENSMUST00000026740 Rspo4Q8BJ73 228 aa11.6□□□□□ -0.55
Col7a1-201ENSMUST00000026740 4930447F04RikA2AFR2 126 aa11.6□□□□□ -0.55
Col7a1-201ENSMUST00000026740 Pate4Q09098 99 aa11.6□□□□□ -0.55
Col7a1-201ENSMUST00000026740 Ighv1-55A0A075B5W6 117 aa11.6□□□□□ -0.55
Col7a1-201ENSMUST00000026740 Znf740Q6NZQ6 180 aa11.6□□□□□ -0.55
Col7a1-201ENSMUST00000026740 4930546C10RikE9Q4Y3 121 aa11.6□□□□□ -0.55
Col7a1-201ENSMUST00000026740 Zfp36l1P23950 338 aa11.6□□□□□ -0.55
Col7a1-201ENSMUST00000026740 MlanaQ2TA50 113 aa11.6□□□□□ -0.55
Col7a1-201ENSMUST00000026740 Klk11Q9QYN3 276 aa11.6□□□□□ -0.55
Col7a1-201ENSMUST00000026740 Slc25a29Q8BL03 306 aa11.59□□□□□ -0.55
Col7a1-201ENSMUST00000026740 Gm4861Q8C5A4 106 aa11.59□□□□□ -0.55
Col7a1-201ENSMUST00000026740 Lypd8Q9D7S0 255 aa11.59□□□□□ -0.55
Col7a1-201ENSMUST00000026740 Gm27027S4R1M6 97 aa11.59□□□□□ -0.55
Col7a1-201ENSMUST00000026740 NrtnP97463 195 aa11.59□□□□□ -0.55
Col7a1-201ENSMUST00000026740 P01649 108 aa11.59□□□□□ -0.55
Col7a1-201ENSMUST00000026740 Glrp1E9Q9S8 174 aa11.59□□□□□ -0.55
Col7a1-201ENSMUST00000026740 P01786 117 aa11.58□□□□□ -0.56
Col7a1-201ENSMUST00000026740 P01660 111 aa11.58□□□□□ -0.56
Col7a1-201ENSMUST00000026740 Gata3P23772 443 aa11.58□□□□□ -0.56
Col7a1-201ENSMUST00000026740 Edn3P48299 214 aa11.58□□□□□ -0.56
Col7a1-201ENSMUST00000026740 Olfr313Q5NC55 308 aa11.58□□□□□ -0.56
Col7a1-201ENSMUST00000026740 Atp6v0e1Q9CQD8 81 aa11.58□□□□□ -0.56
Col7a1-201ENSMUST00000026740 Tmem190Q9D2E9 166 aa11.58□□□□□ -0.56
Col7a1-201ENSMUST00000026740 Lrrk2Q5S006 2527 aa11.58□□□□□ -0.56
Col7a1-201ENSMUST00000026740 Il22ra2Q80XF5 230 aa11.58□□□□□ -0.56
Col7a1-201ENSMUST00000026740 Stpg1Q9D2F5 341 aa11.58□□□□□ -0.56
Col7a1-201ENSMUST00000026740 Klk13Q8CGR6 276 aa11.58□□□□□ -0.56
Col7a1-201ENSMUST00000026740 Sdhaf1Q3U276 118 aa11.58□□□□□ -0.56
Col7a1-201ENSMUST00000026740 Colca2F8VPY8 239 aa11.57□□□□□ -0.56
Col7a1-201ENSMUST00000026740 Fgf4P11403 202 aa11.57□□□□□ -0.56
Col7a1-201ENSMUST00000026740 Igkv6-13A0A0G2JGY3 119 aa11.57□□□□□ -0.56
Col7a1-201ENSMUST00000026740 Foxh1O88621 401 aa11.57□□□□□ -0.56
Col7a1-201ENSMUST00000026740 Synj2bpQ9D6K5 145 aa11.57□□□□□ -0.56
Col7a1-201ENSMUST00000026740 1700084M14RikB1AT01 78 aa11.57□□□□□ -0.56
Col7a1-201ENSMUST00000026740 Acyp1P56376 99 aa11.57□□□□□ -0.56
Col7a1-201ENSMUST00000026740 Gm10192Q3V0S1 108 aa11.56□□□□□ -0.56
Col7a1-201ENSMUST00000026740 Rhno1Q8K3A4 235 aa11.56□□□□□ -0.56
Col7a1-201ENSMUST00000026740 Mtatp8P03930 67 aa11.56□□□□□ -0.56
Col7a1-201ENSMUST00000026740 Lmo1Q924W9 156 aa11.56□□□□□ -0.56
Col7a1-201ENSMUST00000026740 Trav14-3A0A075B607 120 aa11.56□□□□□ -0.56
Col7a1-201ENSMUST00000026740 Gm28778A0A087WSK7 233 aa11.56□□□□□ -0.56
Col7a1-201ENSMUST00000026740 Rbmy1bQ60990 380 aa11.56□□□□□ -0.56
Col7a1-201ENSMUST00000026740 Tomm6Q9CQN3 74 aa11.56□□□□□ -0.56
Col7a1-201ENSMUST00000026740 Igkv8-18A0A0B4J1J3 123 aa11.56□□□□□ -0.56
Col7a1-201ENSMUST00000026740 Q91WE4 72 aa11.56□□□□□ -0.56
Col7a1-201ENSMUST00000026740 Olfr312Q7TRZ9 308 aa11.56□□□□□ -0.56
Col7a1-201ENSMUST00000026740 Trav9-1A0A075B601 112 aa11.56□□□□□ -0.56
Col7a1-201ENSMUST00000026740 IappP12968 93 aa11.56□□□□□ -0.56
Col7a1-201ENSMUST00000026740 Ccl6P27784 116 aa11.56□□□□□ -0.56
Col7a1-201ENSMUST00000026740 Smim10l1A0A087WNQ7 89 aa11.55□□□□□ -0.56
Col7a1-201ENSMUST00000026740 Egr2P08152 470 aa11.55□□□□□ -0.56
Col7a1-201ENSMUST00000026740 A930003A15RikQ3U552 87 aa11.55□□□□□ -0.56
Col7a1-201ENSMUST00000026740 Zmat4Q8BZ94 229 aa11.55□□□□□ -0.56
Col7a1-201ENSMUST00000026740 Lrp4Q8VI56 1905 aa11.55□□□□□ -0.56
Col7a1-201ENSMUST00000026740 9430069I07RikQ9CX21 111 aa11.55□□□□□ -0.56
Col7a1-201ENSMUST00000026740 Trav9d-4A0A0G2JG37 103 aa11.55□□□□□ -0.56
Col7a1-201ENSMUST00000026740 Prss22Q9ER10 306 aa11.54□□□□□ -0.56
Col7a1-201ENSMUST00000026740 Ighv8-2A0A0A6YW58 119 aa11.54□□□□□ -0.56
Col7a1-201ENSMUST00000026740 Ccl21aP84444 133 aa11.54□□□□□ -0.56
Col7a1-201ENSMUST00000026740 Ccl21bP86792 133 aa11.54□□□□□ -0.56
Col7a1-201ENSMUST00000026740 Ccl21cP86793 133 aa11.54□□□□□ -0.56
Col7a1-201ENSMUST00000026740 Fxyd1Q9Z239 92 aa11.54□□□□□ -0.56
Col7a1-201ENSMUST00000026740 A0A1Y7VLU2 103 aa11.54□□□□□ -0.56
Col7a1-201ENSMUST00000026740 Zcchc24B2RVL6 241 aaKnown RBP11.54□□□□□ -0.56
Col7a1-201ENSMUST00000026740 Ang2Q64438 145 aa11.54□□□□□ -0.56
Col7a1-201ENSMUST00000026740 Prdm6Q3UZD5 596 aa11.53□□□□□ -0.56
Col7a1-201ENSMUST00000026740 C730034F03RikQ8BGL5 111 aa11.53□□□□□ -0.56
Col7a1-201ENSMUST00000026740 Spaca3Q9D9X8 221 aa11.53□□□□□ -0.56
Col7a1-201ENSMUST00000026740 Foxf1Q61080 378 aa11.53□□□□□ -0.56
Col7a1-201ENSMUST00000026740 Trav6-6A0A075B603 114 aa11.53□□□□□ -0.56
Col7a1-201ENSMUST00000026740 Trav9d-1A0A075B699 112 aa11.53□□□□□ -0.56
Col7a1-201ENSMUST00000026740 6430628N08RikA0A0U1RQ45 177 aa11.53□□□□□ -0.56
Col7a1-201ENSMUST00000026740 Zfp951A0A087WRH0 451 aa11.53□□□□□ -0.56
Col7a1-201ENSMUST00000026740 Ighv1-62-2A0A0A6YXZ4 119 aa11.53□□□□□ -0.56
Col7a1-201ENSMUST00000026740 Ighv1-58A0A075B5W9 117 aa11.53□□□□□ -0.56
Col7a1-201ENSMUST00000026740 Ccdc179J3QM76 67 aa11.53□□□□□ -0.56
Col7a1-201ENSMUST00000026740 Nbl1Q61477 178 aa11.52□□□□□ -0.56
Col7a1-201ENSMUST00000026740 Lect2O88803 151 aa11.52□□□□□ -0.56
Col7a1-201ENSMUST00000026740 Igll1P20764 209 aa11.52□□□□□ -0.56
Col7a1-201ENSMUST00000026740 Fam222aQ6PGH4 453 aa11.52□□□□□ -0.56
Col7a1-201ENSMUST00000026740 Tm2d3Q8BJ83 261 aa11.52□□□□□ -0.56
Col7a1-201ENSMUST00000026740 Col5a3Q9JLI2 1739 aa11.52□□□□□ -0.57
Col7a1-201ENSMUST00000026740 Ighv5-8A0A075B676 92 aa11.52□□□□□ -0.57
Col7a1-201ENSMUST00000026740 Ighv1-19A0A0A6YWX0 117 aa11.52□□□□□ -0.57
Col7a1-201ENSMUST00000026740 Cox7b2Q9D2H1 82 aa11.52□□□□□ -0.57
Col7a1-201ENSMUST00000026740 A0A1L1SR50 188 aa11.52□□□□□ -0.57
Col7a1-201ENSMUST00000026740 D930007J09RikQ9D2K6 131 aa11.52□□□□□ -0.57
Col7a1-201ENSMUST00000026740 P03980 138 aa11.52□□□□□ -0.57
Col7a1-201ENSMUST00000026740 F930015N05RikQ8C3A3 210 aa11.51□□□□□ -0.57
Col7a1-201ENSMUST00000026740 Fam216bQ8CC14 138 aa11.51□□□□□ -0.57
Col7a1-201ENSMUST00000026740 Defb26Q30KN7 186 aa11.51□□□□□ -0.57
Col7a1-201ENSMUST00000026740 Sptbn4E9PX29 2561 aa11.51□□□□□ -0.57
Col7a1-201ENSMUST00000026740 B9d2Q3UK10 175 aa11.51□□□□□ -0.57
Col7a1-201ENSMUST00000026740 Gm44973A0A140LJJ1 189 aa11.51□□□□□ -0.57
Col7a1-201ENSMUST00000026740 9930022D16RikQ8BG27 128 aa11.51□□□□□ -0.57
Retrieved 100 of 22,080 RNA–protein pairs in 65.3 ms