RNA–Protein interactions for RNA: ENSMUST00000020911.13

Sdc1-201, Transcript of Syndecan-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdc1, Length 3,157 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1-201ENSMUST00000020911 Gm10135F6TEE5 83 aa8.96□□□□□ -0.97
Sdc1-201ENSMUST00000020911 PlnP61014 52 aa8.96□□□□□ -0.97
Sdc1-201ENSMUST00000020911 Gm6040Q4QY32 63 aa8.96□□□□□ -0.97
Sdc1-201ENSMUST00000020911 Trav7d-3Q5R1I1 112 aa8.96□□□□□ -0.97
Sdc1-201ENSMUST00000020911 Gm1553Q66VB7 94 aa8.96□□□□□ -0.97
Sdc1-201ENSMUST00000020911 Psmb8P28063 276 aa8.96□□□□□ -0.98
Sdc1-201ENSMUST00000020911 Defb47Q30KN1 79 aa8.96□□□□□ -0.98
Sdc1-201ENSMUST00000020911 Srsf2Q62093 221 aaKnown RBP8.96□□□□□ -0.98
Sdc1-201ENSMUST00000020911 Pradc1Q9D9N8 188 aa8.96□□□□□ -0.98
Sdc1-201ENSMUST00000020911 OtorQ9JIE3 128 aa8.96□□□□□ -0.98
Sdc1-201ENSMUST00000020911 Cmya5Q70KF4 3739 aa8.96□□□□□ -0.98
Sdc1-201ENSMUST00000020911 Gm5294J3QP53 216 aa8.96□□□□□ -0.98
Sdc1-201ENSMUST00000020911 4930432M17RikQ3V0W9 174 aa8.96□□□□□ -0.98
Sdc1-201ENSMUST00000020911 Defb45Q3V490 66 aa8.96□□□□□ -0.98
Sdc1-201ENSMUST00000020911 Gtsf1lQ9CWD0 151 aa8.96□□□□□ -0.98
Sdc1-201ENSMUST00000020911 Lyg1Q9D7Q0 197 aa8.96□□□□□ -0.98
Sdc1-201ENSMUST00000020911 Col6a4A2AX52 2309 aa8.95□□□□□ -0.98
Sdc1-201ENSMUST00000020911 Map6d1Q14BB9 191 aa8.95□□□□□ -0.98
Sdc1-201ENSMUST00000020911 Dand5Q76LW6 185 aa8.95□□□□□ -0.98
Sdc1-201ENSMUST00000020911 4933414I15RikQ9D4D5 133 aa8.95□□□□□ -0.98
Sdc1-201ENSMUST00000020911 Plac1Q9JI83 173 aa8.95□□□□□ -0.98
Sdc1-201ENSMUST00000020911 Trav9-1A0A075B601 112 aa8.95□□□□□ -0.98
Sdc1-201ENSMUST00000020911 Trav6d-3A0A075B6B3 112 aa8.95□□□□□ -0.98
Sdc1-201ENSMUST00000020911 Gm42674D3YUT9 64 aa8.95□□□□□ -0.98
Sdc1-201ENSMUST00000020911 CrygbP04344 175 aa8.95□□□□□ -0.98
Sdc1-201ENSMUST00000020911 Trav6-3Q5R1E6 112 aa8.95□□□□□ -0.98
Sdc1-201ENSMUST00000020911 Rasl11bQ922H7 247 aa8.95□□□□□ -0.98
Sdc1-201ENSMUST00000020911 Mustn1Q99JI1 82 aa8.95□□□□□ -0.98
Sdc1-201ENSMUST00000020911 Immp1lQ9CQU8 166 aa8.95□□□□□ -0.98
Sdc1-201ENSMUST00000020911 Zc2hc1bQ9D534 172 aa8.95□□□□□ -0.98
Sdc1-201ENSMUST00000020911 Arpc1aQ9R0Q6 370 aa8.95□□□□□ -0.98
Sdc1-201ENSMUST00000020911 NbasE9Q411 2356 aa8.94□□□□□ -0.98
Sdc1-201ENSMUST00000020911 P18526 117 aa8.94□□□□□ -0.98
Sdc1-201ENSMUST00000020911 Crip1P63254 77 aa8.94□□□□□ -0.98
Sdc1-201ENSMUST00000020911 Cdx4Q07424 282 aa8.94□□□□□ -0.98
Sdc1-201ENSMUST00000020911 Olfr311Q5NC59 308 aa8.94□□□□□ -0.98
Sdc1-201ENSMUST00000020911 Prima1Q810F0 153 aa8.94□□□□□ -0.98
Sdc1-201ENSMUST00000020911 Gm4763Q8CFJ5 196 aa8.94□□□□□ -0.98
Sdc1-201ENSMUST00000020911 Parm1Q923D3 296 aa8.94□□□□□ -0.98
Sdc1-201ENSMUST00000020911 Mrpl52Q9D0Y8 121 aa8.94□□□□□ -0.98
Sdc1-201ENSMUST00000020911 Timm23Q9WTQ8 209 aa8.94□□□□□ -0.98
Sdc1-201ENSMUST00000020911 AdipoqQ60994 247 aa8.94□□□□□ -0.98
Sdc1-201ENSMUST00000020911 Klk15Q8CGR4 254 aa8.94□□□□□ -0.98
Sdc1-201ENSMUST00000020911 Cspg4Q8VHY0 2327 aa8.94□□□□□ -0.98
Sdc1-201ENSMUST00000020911 Tnfaip6O08859 275 aa8.94□□□□□ -0.98
Sdc1-201ENSMUST00000020911 Ccl2P10148 148 aa8.94□□□□□ -0.98
Sdc1-201ENSMUST00000020911 Ube2d1P61080 147 aaKnown RBP8.94□□□□□ -0.98
Sdc1-201ENSMUST00000020911 Prss58Q8BW11 241 aa8.94□□□□□ -0.98
Sdc1-201ENSMUST00000020911 Dpm2Q9Z324 84 aa8.94□□□□□ -0.98
Sdc1-201ENSMUST00000020911 Ncor2Q9WU42 2472 aaKnown RBP8.93□□□□□ -0.98
Sdc1-201ENSMUST00000020911 Chd8Q09XV5 2582 aaKnown RBP8.93□□□□□ -0.98
Sdc1-201ENSMUST00000020911 Lce6aD3YV94 81 aa8.93□□□□□ -0.98
Sdc1-201ENSMUST00000020911 Hoxb4P10284 250 aa8.93□□□□□ -0.98
Sdc1-201ENSMUST00000020911 Ang4Q3TMQ6 144 aa8.93□□□□□ -0.98
Sdc1-201ENSMUST00000020911 SNORCQ9CXL7 121 aa8.93□□□□□ -0.98
Sdc1-201ENSMUST00000020911 Mettl26Q9DCS2 204 aa8.93□□□□□ -0.98
Sdc1-201ENSMUST00000020911 Ighv7-4A0A0A6YXL5 121 aa8.93□□□□□ -0.98
Sdc1-201ENSMUST00000020911 Trbv19A0A0B4J1H4 117 aa8.93□□□□□ -0.98
Sdc1-201ENSMUST00000020911 Olfr1454Q8VFW2 307 aa8.93□□□□□ -0.98
Sdc1-201ENSMUST00000020911 Gemin7Q9CWY4 129 aa8.93□□□□□ -0.98
Sdc1-201ENSMUST00000020911 Med13lQ6JPI3 2207 aa8.93□□□□□ -0.98
Sdc1-201ENSMUST00000020911 P04940 107 aa8.92□□□□□ -0.98
Sdc1-201ENSMUST00000020911 P04942 107 aa8.92□□□□□ -0.98
Sdc1-201ENSMUST00000020911 Shisa9Q9CZN4 424 aa8.92□□□□□ -0.98
Sdc1-201ENSMUST00000020911 Trav7-1A0A0G2JEV5 112 aa8.92□□□□□ -0.98
Sdc1-201ENSMUST00000020911 Gm15091B1AZM2 449 aa8.92□□□□□ -0.98
Sdc1-201ENSMUST00000020911 Fam240aJ3QNP9 97 aa8.92□□□□□ -0.98
Sdc1-201ENSMUST00000020911 Ins1P01325 108 aa8.92□□□□□ -0.98
Sdc1-201ENSMUST00000020911 Csn3P06796 181 aa8.92□□□□□ -0.98
Sdc1-201ENSMUST00000020911 OtoglF7A4A7 2325 aa8.92□□□□□ -0.98
Sdc1-201ENSMUST00000020911 Gm21983D6RFS9 131 aa8.91□□□□□ -0.98
Sdc1-201ENSMUST00000020911 Esp3J3QN49 87 aa8.91□□□□□ -0.98
Sdc1-201ENSMUST00000020911 Armcx4E9PWM3 2356 aa8.91□□□□□ -0.98
Sdc1-201ENSMUST00000020911 Igkv14-130A0A0G2JF45 117 aa8.91□□□□□ -0.98
Sdc1-201ENSMUST00000020911 Gm12689Q8BQU9 117 aa8.91□□□□□ -0.98
Sdc1-201ENSMUST00000020911 Nav2E9Q842 2432 aa8.91□□□□□ -0.98
Sdc1-201ENSMUST00000020911 Trav9d-1A0A075B699 112 aa8.91□□□□□ -0.98
Sdc1-201ENSMUST00000020911 KprpB2RUR4 657 aa8.91□□□□□ -0.98
Sdc1-201ENSMUST00000020911 Gm28044L7N1X0 119 aa8.91□□□□□ -0.98
Sdc1-201ENSMUST00000020911 Rnase4Q9JJH1 148 aa8.91□□□□□ -0.98
Sdc1-201ENSMUST00000020911 Ccl8Q9Z121 97 aa8.91□□□□□ -0.98
Sdc1-201ENSMUST00000020911 Umad1E0CX23 159 aa8.9□□□□□ -0.98
Sdc1-201ENSMUST00000020911 Gm10767Q3TQP0 103 aa8.9□□□□□ -0.98
Sdc1-201ENSMUST00000020911 Gm9922Q8C3P1 144 aa8.9□□□□□ -0.98
Sdc1-201ENSMUST00000020911 Ighv9-3A0A0B4J1J5 117 aa8.9□□□□□ -0.98
Sdc1-201ENSMUST00000020911 Casp6O08738 276 aa8.9□□□□□ -0.98
Sdc1-201ENSMUST00000020911 CampP51437 172 aa8.9□□□□□ -0.98
Sdc1-201ENSMUST00000020911 Cxcl14Q9WUQ5 99 aa8.9□□□□□ -0.98
Sdc1-201ENSMUST00000020911 Trav7-6A0A075B640 112 aa8.89□□□□□ -0.99
Sdc1-201ENSMUST00000020911 AmelxP63277 210 aa8.89□□□□□ -0.99
Sdc1-201ENSMUST00000020911 Slc25a39Q9D8K8 359 aa8.89□□□□□ -0.99
Sdc1-201ENSMUST00000020911 Trav4-4-dv10A0A075B651 110 aa8.89□□□□□ -0.99
Sdc1-201ENSMUST00000020911 SrarpQ3ULG3 163 aa8.89□□□□□ -0.99
Sdc1-201ENSMUST00000020911 Zfp951A0A087WRH0 451 aa8.89□□□□□ -0.99
Sdc1-201ENSMUST00000020911 NpwA0A1L1STR8 176 aa8.89□□□□□ -0.99
Sdc1-201ENSMUST00000020911 TtrP07309 147 aa8.89□□□□□ -0.99
Sdc1-201ENSMUST00000020911 Rnf182Q8C432 247 aa8.89□□□□□ -0.99
Sdc1-201ENSMUST00000020911 Triap1Q9D8Z2 76 aa8.89□□□□□ -0.99
Sdc1-201ENSMUST00000020911 Prrc2aQ7TSC1 2158 aaKnown RBP8.89□□□□□ -0.99
Sdc1-201ENSMUST00000020911 Ighv5-12-4A0A0A6YWG4 117 aa8.88□□□□□ -0.99
Retrieved 100 of 22,080 RNA–protein pairs in 53 ms