Protein–RNA interactions for Protein: O08859

Tnfaip6, Tumor necrosis factor-inducible gene 6 protein, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfaip6O08859 Gm25239-201ENSMUST00000174915 86 ntBASIC30.17■■■□□ 2.42
Tnfaip6O08859 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
Tnfaip6O08859 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
Tnfaip6O08859 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
Tnfaip6O08859 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Tnfaip6O08859 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC27.06■■□□□ 1.92
Tnfaip6O08859 Gm15042-201ENSMUST00000120212 883 ntBASIC26.78■■□□□ 1.88
Tnfaip6O08859 Gm15045-201ENSMUST00000117359 883 ntBASIC26.22■■□□□ 1.79
Tnfaip6O08859 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Tnfaip6O08859 Psd-208ENSMUST00000224556 2034 ntBASIC25.94■■□□□ 1.74
Tnfaip6O08859 Gm24109-201ENSMUST00000175489 103 ntBASIC25.93■■□□□ 1.74
Tnfaip6O08859 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Tnfaip6O08859 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC25.64■■□□□ 1.7
Tnfaip6O08859 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC25.61■■□□□ 1.69
Tnfaip6O08859 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Tnfaip6O08859 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC25.44■■□□□ 1.66
Tnfaip6O08859 Gm23366-201ENSMUST00000175022 89 ntBASIC25.29■■□□□ 1.64
Tnfaip6O08859 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
Tnfaip6O08859 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.63
Tnfaip6O08859 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Tnfaip6O08859 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
Tnfaip6O08859 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Tnfaip6O08859 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
Tnfaip6O08859 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
Tnfaip6O08859 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC25.05■■□□□ 1.6
Tnfaip6O08859 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Tnfaip6O08859 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC24.96■■□□□ 1.59
Tnfaip6O08859 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Tnfaip6O08859 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Tnfaip6O08859 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Tnfaip6O08859 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC24.7■■□□□ 1.55
Tnfaip6O08859 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Tnfaip6O08859 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC24.66■■□□□ 1.54
Tnfaip6O08859 AC153911.1-202ENSMUST00000218534 1034 ntBASIC24.6■■□□□ 1.53
Tnfaip6O08859 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
Tnfaip6O08859 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Tnfaip6O08859 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
Tnfaip6O08859 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Tnfaip6O08859 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC24.29■■□□□ 1.48
Tnfaip6O08859 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
Tnfaip6O08859 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Tnfaip6O08859 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
Tnfaip6O08859 Gm10524-201ENSMUST00000181931 1893 ntBASIC23.98■■□□□ 1.43
Tnfaip6O08859 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC23.98■■□□□ 1.43
Tnfaip6O08859 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Tnfaip6O08859 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC23.96■■□□□ 1.43
Tnfaip6O08859 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Tnfaip6O08859 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Tnfaip6O08859 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Tnfaip6O08859 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Tnfaip6O08859 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Tnfaip6O08859 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC23.76■■□□□ 1.39
Tnfaip6O08859 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Tnfaip6O08859 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Tnfaip6O08859 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Tnfaip6O08859 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Tnfaip6O08859 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC23.66■■□□□ 1.38
Tnfaip6O08859 Gm25238-201ENSMUST00000174914 89 ntBASIC23.66■■□□□ 1.38
Tnfaip6O08859 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Tnfaip6O08859 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
Tnfaip6O08859 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC23.55■■□□□ 1.36
Tnfaip6O08859 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Tnfaip6O08859 Gm27325-201ENSMUST00000175467 74 ntBASIC23.53■■□□□ 1.36
Tnfaip6O08859 CT025624.2-201ENSMUST00000223609 1909 ntBASIC23.52■■□□□ 1.36
Tnfaip6O08859 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Tnfaip6O08859 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC23.5■■□□□ 1.35
Tnfaip6O08859 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC23.49■■□□□ 1.35
Tnfaip6O08859 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC23.49■■□□□ 1.35
Tnfaip6O08859 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC23.46■■□□□ 1.35
Tnfaip6O08859 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC23.4■■□□□ 1.34
Tnfaip6O08859 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC23.38■■□□□ 1.33
Tnfaip6O08859 Gm42596-201ENSMUST00000196305 1958 ntBASIC23.38■■□□□ 1.33
Tnfaip6O08859 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Tnfaip6O08859 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC23.26■■□□□ 1.31
Tnfaip6O08859 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Tnfaip6O08859 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Tnfaip6O08859 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Tnfaip6O08859 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC23.11■■□□□ 1.29
Tnfaip6O08859 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC23.09■■□□□ 1.29
Tnfaip6O08859 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC23.05■■□□□ 1.28
Tnfaip6O08859 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Tnfaip6O08859 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Tnfaip6O08859 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Tnfaip6O08859 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Tnfaip6O08859 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Tnfaip6O08859 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC23■■□□□ 1.27
Tnfaip6O08859 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Tnfaip6O08859 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Tnfaip6O08859 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Tnfaip6O08859 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC22.91■■□□□ 1.26
Tnfaip6O08859 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Tnfaip6O08859 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC22.87■■□□□ 1.25
Tnfaip6O08859 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Tnfaip6O08859 Rab21-202ENSMUST00000218831 843 ntBASIC22.85■■□□□ 1.25
Tnfaip6O08859 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Tnfaip6O08859 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC22.83■■□□□ 1.24
Tnfaip6O08859 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Tnfaip6O08859 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC22.81■■□□□ 1.24
Tnfaip6O08859 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Tnfaip6O08859 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC22.75■■□□□ 1.23
Retrieved 100 of 76,532 protein–RNA pairs in 13.9 ms