RNA–Protein interactions for RNA: ENSMUST00000005749.5

Ctr9-201, Transcript of RNA polymerase-associated protein CTR9 homolog, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctr9, Length 4,300 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9-201ENSMUST00000005749 Tnrc6aQ3UHK8 1896 aaKnown RBP9.4□□□□□ -0.91
Ctr9-201ENSMUST00000005749 Bles03Q8VD62 251 aa9.4□□□□□ -0.91
Ctr9-201ENSMUST00000005749 PtprbB2RU80 1998 aa9.39□□□□□ -0.91
Ctr9-201ENSMUST00000005749 Tns1E9Q0S6 1888 aaKnown RBP9.39□□□□□ -0.91
Ctr9-201ENSMUST00000005749 Ang4Q3TMQ6 144 aa9.39□□□□□ -0.91
Ctr9-201ENSMUST00000005749 Lyzl4Q9D925 145 aa9.39□□□□□ -0.91
Ctr9-201ENSMUST00000005749 Bhlha15Q9QYC3 197 aa9.39□□□□□ -0.91
Ctr9-201ENSMUST00000005749 Dkk2Q9QYZ8 259 aa9.39□□□□□ -0.91
Ctr9-201ENSMUST00000005749 Tmem141A2AJB2 108 aa9.39□□□□□ -0.91
Ctr9-201ENSMUST00000005749 Saa3P04918 122 aa9.39□□□□□ -0.91
Ctr9-201ENSMUST00000005749 Crip1P63254 77 aa9.39□□□□□ -0.91
Ctr9-201ENSMUST00000005749 Il22ra2Q80XF5 230 aa9.39□□□□□ -0.91
Ctr9-201ENSMUST00000005749 Ifitm10Q8BR26 201 aa9.39□□□□□ -0.91
Ctr9-201ENSMUST00000005749 Q8R092 253 aa9.39□□□□□ -0.91
Ctr9-201ENSMUST00000005749 Olfr1402Q8VET1 320 aa9.39□□□□□ -0.91
Ctr9-201ENSMUST00000005749 Gm35549A0A0N4SUS7 141 aa9.39□□□□□ -0.91
Ctr9-201ENSMUST00000005749 P01793 123 aa9.39□□□□□ -0.91
Ctr9-201ENSMUST00000005749 Tcl1b4P56844 120 aa9.39□□□□□ -0.91
Ctr9-201ENSMUST00000005749 Gm815Q3UWS2 115 aa9.39□□□□□ -0.91
Ctr9-201ENSMUST00000005749 Lsm4Q9QXA5 137 aaKnown RBP9.39□□□□□ -0.91
Ctr9-201ENSMUST00000005749 P01786 117 aa9.38□□□□□ -0.91
Ctr9-201ENSMUST00000005749 Tex26Q0VB26 296 aa9.38□□□□□ -0.91
Ctr9-201ENSMUST00000005749 Gm9944Q8C559 102 aa9.38□□□□□ -0.91
Ctr9-201ENSMUST00000005749 Rpl36-ps4A0A140T8U4 117 aa9.38□□□□□ -0.91
Ctr9-201ENSMUST00000005749 Gm5294J3QP53 216 aa9.38□□□□□ -0.91
Ctr9-201ENSMUST00000005749 P04943 107 aa9.38□□□□□ -0.91
Ctr9-201ENSMUST00000005749 Hoxa5P09021 270 aa9.38□□□□□ -0.91
Ctr9-201ENSMUST00000005749 Cd24P24807 76 aa9.38□□□□□ -0.91
Ctr9-201ENSMUST00000005749 Foxi1Q922I5 372 aa9.38□□□□□ -0.91
Ctr9-201ENSMUST00000005749 Fam162bQ9CX19 157 aa9.38□□□□□ -0.91
Ctr9-201ENSMUST00000005749 Brca2P97929 3329 aa9.38□□□□□ -0.91
Ctr9-201ENSMUST00000005749 Smim13E9Q942 88 aa9.38□□□□□ -0.91
Ctr9-201ENSMUST00000005749 Q8C708 225 aa9.38□□□□□ -0.91
Ctr9-201ENSMUST00000005749 PmvkQ9D1G2 192 aa9.38□□□□□ -0.91
Ctr9-201ENSMUST00000005749 Olfr745Q7TRL9 328 aa9.37□□□□□ -0.91
Ctr9-201ENSMUST00000005749 Olfr982Q8VGB3 321 aa9.37□□□□□ -0.91
Ctr9-201ENSMUST00000005749 Synj2bpQ9D6K5 145 aa9.37□□□□□ -0.91
Ctr9-201ENSMUST00000005749 Rnf114Q9ET26 229 aa9.37□□□□□ -0.91
Ctr9-201ENSMUST00000005749 Bex1Q9R224 128 aa9.37□□□□□ -0.91
Ctr9-201ENSMUST00000005749 Gcn1E9PVA8 2671 aaKnown RBP9.37□□□□□ -0.91
Ctr9-201ENSMUST00000005749 Trav16d-dv11A0A075B617 117 aa9.37□□□□□ -0.91
Ctr9-201ENSMUST00000005749 Fbln7Q501P1 440 aa9.37□□□□□ -0.91
Ctr9-201ENSMUST00000005749 Plpp2Q9DAX2 276 aa9.37□□□□□ -0.91
Ctr9-201ENSMUST00000005749 Wfdc15bQ9JHY4 80 aa9.37□□□□□ -0.91
Ctr9-201ENSMUST00000005749 Srsf1Q6PDM2 248 aaKnown RBP9.37□□□□□ -0.91
Ctr9-201ENSMUST00000005749 Znf575Q3TXZ1 239 aa9.37□□□□□ -0.91
Ctr9-201ENSMUST00000005749 Gm7489Q3UT34 171 aa9.37□□□□□ -0.91
Ctr9-201ENSMUST00000005749 Tspo2Q9CRZ8 162 aa9.37□□□□□ -0.91
Ctr9-201ENSMUST00000005749 Esp24A8R0V6 68 aa9.36□□□□□ -0.91
Ctr9-201ENSMUST00000005749 Prp2P05143 317 aa9.36□□□□□ -0.91
Ctr9-201ENSMUST00000005749 Rpl36aP83882 106 aaKnown RBP9.36□□□□□ -0.91
Ctr9-201ENSMUST00000005749 Defa20Q45VN2 95 aa9.36□□□□□ -0.91
Ctr9-201ENSMUST00000005749 Gm9958Q8C9U4 106 aa9.36□□□□□ -0.91
Ctr9-201ENSMUST00000005749 Hist1h2bfP10853 126 aa9.36□□□□□ -0.91
Ctr9-201ENSMUST00000005749 Hist1h2bbQ64475 126 aa9.36□□□□□ -0.91
Ctr9-201ENSMUST00000005749 Hist1h2bkQ8CGP1 126 aaKnown RBP9.36□□□□□ -0.91
Ctr9-201ENSMUST00000005749 Hist1h2bpQ8CGP2 126 aaKnown RBP9.36□□□□□ -0.91
Ctr9-201ENSMUST00000005749 Q9DAA3 117 aa9.36□□□□□ -0.91
Ctr9-201ENSMUST00000005749 Gm10130F6ZHM5 101 aa9.36□□□□□ -0.91
Ctr9-201ENSMUST00000005749 Pfn1P62962 140 aa9.36□□□□□ -0.91
Ctr9-201ENSMUST00000005749 Zfand3Q497H0 227 aa9.36□□□□□ -0.91
Ctr9-201ENSMUST00000005749 Ubr5Q80TP3 2792 aa9.36□□□□□ -0.91
Ctr9-201ENSMUST00000005749 Ighv1-64A0A075B5X3 117 aa9.35□□□□□ -0.91
Ctr9-201ENSMUST00000005749 Trav14n-3A0A075B645 120 aa9.35□□□□□ -0.91
Ctr9-201ENSMUST00000005749 Gng7Q61016 68 aa9.35□□□□□ -0.91
Ctr9-201ENSMUST00000005749 Igkv4-57-1A0A075B5M4 119 aa9.35□□□□□ -0.91
Ctr9-201ENSMUST00000005749 Gm11020F6ZGD5 61 aa9.35□□□□□ -0.91
Ctr9-201ENSMUST00000005749 TtrP07309 147 aa9.35□□□□□ -0.91
Ctr9-201ENSMUST00000005749 Gm10842Q3U587 122 aa9.35□□□□□ -0.91
Ctr9-201ENSMUST00000005749 Gm5148Q8BGG2 154 aa9.35□□□□□ -0.91
Ctr9-201ENSMUST00000005749 Gtf2h5Q8K2X8 71 aa9.35□□□□□ -0.91
Ctr9-201ENSMUST00000005749 Dmrtc1c1Q9D410 238 aa9.35□□□□□ -0.91
Ctr9-201ENSMUST00000005749 BptfA2A654 3036 aaKnown RBP9.35□□□□□ -0.91
Ctr9-201ENSMUST00000005749 Ankrd17Q99NH0 2603 aaKnown RBP9.35□□□□□ -0.91
Ctr9-201ENSMUST00000005749 Ighv1-12A0A0A6YXJ9 117 aa9.35□□□□□ -0.91
Ctr9-201ENSMUST00000005749 8030423J24RikQ9CX45 142 aa9.35□□□□□ -0.91
Ctr9-201ENSMUST00000005749 Dnal4Q9DCM4 105 aa9.35□□□□□ -0.91
Ctr9-201ENSMUST00000005749 FlnaQ8BTM8 2647 aaKnown RBP9.35□□□□□ -0.91
Ctr9-201ENSMUST00000005749 Ighv1-52A0A0A6YXC3 117 aa9.35□□□□□ -0.91
Ctr9-201ENSMUST00000005749 P01738 130 aa9.35□□□□□ -0.91
Ctr9-201ENSMUST00000005749 Gm5150Q1AN92 299 aa9.35□□□□□ -0.91
Ctr9-201ENSMUST00000005749 GalmQ8K157 342 aa9.35□□□□□ -0.91
Ctr9-201ENSMUST00000005749 Erg28Q9ERY9 140 aa9.35□□□□□ -0.91
Ctr9-201ENSMUST00000005749 Gm10203F6QJ09 66 aa9.34□□□□□ -0.91
Ctr9-201ENSMUST00000005749 Gm5129F6YHA9 99 aa9.34□□□□□ -0.91
Ctr9-201ENSMUST00000005749 CtsgP28293 261 aa9.34□□□□□ -0.91
Ctr9-201ENSMUST00000005749 Pygo2Q80V76 405 aa9.34□□□□□ -0.91
Ctr9-201ENSMUST00000005749 Psmg3Q9CZH3 122 aa9.34□□□□□ -0.91
Ctr9-201ENSMUST00000005749 Mrpl53Q9D1H8 118 aaKnown RBP9.34□□□□□ -0.91
Ctr9-201ENSMUST00000005749 Higd1aQ9JLR9 95 aa9.34□□□□□ -0.91
Ctr9-201ENSMUST00000005749 Gm10638F6QEG2 257 aa9.34□□□□□ -0.91
Ctr9-201ENSMUST00000005749 Tcrg-V4A0A0B4J1J8 138 aa9.34□□□□□ -0.91
Ctr9-201ENSMUST00000005749 Shisal2aA2A9G7 189 aa9.34□□□□□ -0.91
Ctr9-201ENSMUST00000005749 Igkv1-99F6XWB2 120 aa9.34□□□□□ -0.91
Ctr9-201ENSMUST00000005749 Defa37K9J724 93 aa9.34□□□□□ -0.91
Ctr9-201ENSMUST00000005749 MsmbO08540 113 aa9.34□□□□□ -0.91
Ctr9-201ENSMUST00000005749 Defa5P28312 93 aa9.34□□□□□ -0.91
Ctr9-201ENSMUST00000005749 Mc5rP41149 325 aa9.34□□□□□ -0.91
Ctr9-201ENSMUST00000005749 CirbpP60824 172 aaKnown RBP9.34□□□□□ -0.91
Ctr9-201ENSMUST00000005749 Atp6v0bQ91V37 205 aa9.34□□□□□ -0.91
Retrieved 100 of 22,080 RNA–protein pairs in 36.1 ms