RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 LRP2P98164 4655 aa5.29□□□□□ -1.56
PRPF38A-202ENST00000474048 CYSTM1Q9H1C7 97 aa5.28□□□□□ -1.56
PRPF38A-202ENST00000474048 ACYP2P14621 99 aa5.27□□□□□ -1.57
PRPF38A-202ENST00000474048 CHKB-CPT1BH3BT56 60 aa5.25□□□□□ -1.57
PRPF38A-202ENST00000474048 DMAC1Q96GE9 116 aa5.24□□□□□ -1.57
PRPF38A-202ENST00000474048 KRTAP19-1Q8IUB9 90 aa5.22□□□□□ -1.57
PRPF38A-202ENST00000474048 KRTAP4-1Q9BYQ7 146 aa5.22□□□□□ -1.57
PRPF38A-202ENST00000474048 H1FX-AS1Q4G0G2 97 aa5.21□□□□□ -1.58
PRPF38A-202ENST00000474048 SPTSSBQ8NFR3 76 aa5.19□□□□□ -1.58
PRPF38A-202ENST00000474048 MPLKIPQ8TAP9 179 aa5.19□□□□□ -1.58
PRPF38A-202ENST00000474048 S4R3F8 94 aa5.18□□□□□ -1.58
PRPF38A-202ENST00000474048 KRTAP9-9Q9BYP9 154 aa5.17□□□□□ -1.58
PRPF38A-202ENST00000474048 KRTAP9-4Q9BYQ2 154 aa5.17□□□□□ -1.58
PRPF38A-202ENST00000474048 MUC17Q685J3 4493 aa5.17□□□□□ -1.58
PRPF38A-202ENST00000474048 COA5Q86WW8 74 aa5.16□□□□□ -1.58
PRPF38A-202ENST00000474048 SERP1Q9Y6X1 66 aa5.15□□□□□ -1.59
PRPF38A-202ENST00000474048 KRTAP3-1Q9BYR8 98 aa5.12□□□□□ -1.59
PRPF38A-202ENST00000474048 KRTAP4-8A0A0G2JLE6 195 aa5.1□□□□□ -1.59
PRPF38A-202ENST00000474048 M0R2T5 61 aa5.09□□□□□ -1.59
PRPF38A-202ENST00000474048 LCA10Q71F78 164 aa5.08□□□□□ -1.6
PRPF38A-202ENST00000474048 CSAG1Q6PB30 78 aa5.07□□□□□ -1.6
PRPF38A-202ENST00000474048 UBR4Q5T4S7 5183 aa5.05□□□□□ -1.6
PRPF38A-202ENST00000474048 SEC61GP60059 68 aa5.03□□□□□ -1.6
PRPF38A-202ENST00000474048 RPS28P62857 69 aaKnown RBP5.03□□□□□ -1.6
PRPF38A-202ENST00000474048 KRTAP19-2Q3LHN2 52 aa5.01□□□□□ -1.61
PRPF38A-202ENST00000474048 SMIM26A0A096LP01 95 aa5□□□□□ -1.61
PRPF38A-202ENST00000474048 V9GYY9 64 aa5□□□□□ -1.61
PRPF38A-202ENST00000474048 KRTAP23-1A1A580 65 aa4.99□□□□□ -1.61
PRPF38A-202ENST00000474048 PRR15LQ9BU68 103 aa4.99□□□□□ -1.61
PRPF38A-202ENST00000474048 RNF213Q63HN8 5207 aa4.98□□□□□ -1.61
PRPF38A-202ENST00000474048 MUC2Q02817 5179 aa4.96□□□□□ -1.61
PRPF38A-202ENST00000474048 MT1HP80294 61 aa4.96□□□□□ -1.62
PRPF38A-202ENST00000474048 LCE1DQ5T752 114 aa4.96□□□□□ -1.62
PRPF38A-202ENST00000474048 A0A1B0GU69 56 aa4.95□□□□□ -1.62
PRPF38A-202ENST00000474048 KRTAP4-7Q9BYR0 210 aa4.92□□□□□ -1.62
PRPF38A-202ENST00000474048 KRTAP19-4Q3LI73 84 aa4.91□□□□□ -1.62
PRPF38A-202ENST00000474048 ADM2Q7Z4H4 148 aa4.9□□□□□ -1.63
PRPF38A-202ENST00000474048 LINC01558Q9Y6Z2 57 aa4.9□□□□□ -1.63
PRPF38A-202ENST00000474048 H0YAA0 97 aa4.89□□□□□ -1.63
PRPF38A-202ENST00000474048 Q1T7F1 81 aa4.89□□□□□ -1.63
PRPF38A-202ENST00000474048 PSPHP1O15172 72 aa4.84□□□□□ -1.63
PRPF38A-202ENST00000474048 FAT4Q6V0I7 4981 aa4.84□□□□□ -1.63
PRPF38A-202ENST00000474048 FLGP20930 4061 aaPredicted RBP4.82□□□□□ -1.64
PRPF38A-202ENST00000474048 KRTAP10-6P60371 365 aaPredicted RBP4.81□□□□□ -1.64
PRPF38A-202ENST00000474048 KRTAP4-9Q9BYQ8 210 aa4.81□□□□□ -1.64
PRPF38A-202ENST00000474048 A0A1B0GU33 70 aa4.8□□□□□ -1.64
PRPF38A-202ENST00000474048 KRTAP10-10P60014 251 aa4.8□□□□□ -1.64
PRPF38A-202ENST00000474048 R4GN34 69 aa4.8□□□□□ -1.64
PRPF38A-202ENST00000474048 P0C880 135 aa4.78□□□□□ -1.64
PRPF38A-202ENST00000474048 CRIPTQ9P021 101 aa4.78□□□□□ -1.64
PRPF38A-202ENST00000474048 UQCR11O14957 56 aa4.77□□□□□ -1.65
PRPF38A-202ENST00000474048 LCE4AQ5TA78 99 aa4.77□□□□□ -1.65
PRPF38A-202ENST00000474048 A6NED7 52 aa4.76□□□□□ -1.65
PRPF38A-202ENST00000474048 M0QZ58 72 aa4.76□□□□□ -1.65
PRPF38A-202ENST00000474048 MT2AP02795 61 aa4.74□□□□□ -1.65
PRPF38A-202ENST00000474048 Q5VV11 94 aa4.74□□□□□ -1.65
PRPF38A-202ENST00000474048 KRTAP9-8Q9BYQ0 159 aa4.71□□□□□ -1.66
PRPF38A-202ENST00000474048 KRTAP4-2Q9BYR5 136 aa4.71□□□□□ -1.66
PRPF38A-202ENST00000474048 MT1FP04733 61 aa4.69□□□□□ -1.66
PRPF38A-202ENST00000474048 MIR22HGQ0VDD5 57 aa4.69□□□□□ -1.66
PRPF38A-202ENST00000474048 LINC01554Q52M75 96 aa4.69□□□□□ -1.66
PRPF38A-202ENST00000474048 SPATA8Q6RVD6 105 aa4.67□□□□□ -1.66
PRPF38A-202ENST00000474048 KRTAP9-7A8MTY7 169 aa4.66□□□□□ -1.66
PRPF38A-202ENST00000474048 A0A0D9SG42 100 aa4.65□□□□□ -1.67
PRPF38A-202ENST00000474048 K7ERS5 55 aa4.64□□□□□ -1.67
PRPF38A-202ENST00000474048 KRTAP4-11Q9BYQ6 195 aa4.64□□□□□ -1.67
PRPF38A-202ENST00000474048 KRTAP13-4Q3LI77 160 aa4.6□□□□□ -1.67
PRPF38A-202ENST00000474048 BRK1Q8WUW1 75 aa4.6□□□□□ -1.67
PRPF38A-202ENST00000474048 SPRR2GQ9BYE4 73 aa4.6□□□□□ -1.67
PRPF38A-202ENST00000474048 CDC42SE1Q9NRR8 79 aa4.6□□□□□ -1.67
PRPF38A-202ENST00000474048 SPINT4Q6UDR6 99 aa4.58□□□□□ -1.68
PRPF38A-202ENST00000474048 A0A0A0MQY5 61 aa4.57□□□□□ -1.68
PRPF38A-202ENST00000474048 A8MU10 97 aa4.57□□□□□ -1.68
PRPF38A-202ENST00000474048 LCE5AQ5TCM9 118 aa4.57□□□□□ -1.68
PRPF38A-202ENST00000474048 PLAC4Q8WY50 150 aa4.57□□□□□ -1.68
PRPF38A-202ENST00000474048 KRTAP9-3Q9BYQ3 159 aa4.55□□□□□ -1.68
PRPF38A-202ENST00000474048 A6NN06 94 aa4.54□□□□□ -1.68
PRPF38A-202ENST00000474048 CAMK2N1Q7Z7J9 78 aa4.51□□□□□ -1.69
PRPF38A-202ENST00000474048 KRTAP19-8Q3LI54 63 aa4.48□□□□□ -1.69
PRPF38A-202ENST00000474048 KRTAP12-1P59990 96 aa4.47□□□□□ -1.69
PRPF38A-202ENST00000474048 KRTAP12-2P59991 146 aa4.45□□□□□ -1.7
PRPF38A-202ENST00000474048 PRO2289Q9P1D8 64 aa4.41□□□□□ -1.7
PRPF38A-202ENST00000474048 MT1BP07438 61 aa4.4□□□□□ -1.71
PRPF38A-202ENST00000474048 PRO0628Q9UI54 55 aa4.4□□□□□ -1.71
PRPF38A-202ENST00000474048 KRTAP15-1Q3LI76 137 aa4.36□□□□□ -1.71
PRPF38A-202ENST00000474048 PMAIP1Q13794 54 aa4.35□□□□□ -1.71
PRPF38A-202ENST00000474048 ROMO1P60602 79 aa4.29□□□□□ -1.72
PRPF38A-202ENST00000474048 KRTAP10-5P60370 271 aa4.25□□□□□ -1.73
PRPF38A-202ENST00000474048 TNP1P09430 55 aa4.24□□□□□ -1.73
PRPF38A-202ENST00000474048 MT1XP80297 61 aa4.24□□□□□ -1.73
PRPF38A-202ENST00000474048 KRTAP19-6Q3LI70 58 aa4.24□□□□□ -1.73
PRPF38A-202ENST00000474048 C10orf95Q9H7T3 257 aa4.21□□□□□ -1.74
PRPF38A-202ENST00000474048 CRCT1Q9UGL9 99 aa4.21□□□□□ -1.74
PRPF38A-202ENST00000474048 KRTAP25-1Q3LHN0 102 aa4.2□□□□□ -1.74
PRPF38A-202ENST00000474048 USH2AO75445 5202 aa4.2□□□□□ -1.74
PRPF38A-202ENST00000474048 KRTAP5-3Q6L8H2 238 aa4.19□□□□□ -1.74
PRPF38A-202ENST00000474048 FSIP2Q5CZC0 6907 aa4.14□□□□□ -1.75
PRPF38A-202ENST00000474048 SSPOA2VEC9 5147 aa4.12□□□□□ -1.75
PRPF38A-202ENST00000474048 KTN1-AS1Q86SY8 53 aa4.11□□□□□ -1.75
PRPF38A-202ENST00000474048 KRTAP10-12P60413 245 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms