Protein–RNA interactions for Protein: Q9BYQ8

KRTAP4-9, Keratin-associated protein 4-9, humanhuman

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-9Q9BYQ8 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
KRTAP4-9Q9BYQ8 AC079416.2-201ENST00000625035 1193 ntBASIC12.32□□□□□ -0.44
KRTAP4-9Q9BYQ8 AC092473.1-201ENST00000441098 221 ntBASIC12.06□□□□□ -0.48
KRTAP4-9Q9BYQ8 AP001002.2-201ENST00000625137 386 ntBASIC12.03□□□□□ -0.48
KRTAP4-9Q9BYQ8 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC12.01□□□□□ -0.49
KRTAP4-9Q9BYQ8 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC11.9□□□□□ -0.5
KRTAP4-9Q9BYQ8 AC109587.1-201ENST00000482368 962 ntTSL 3 BASIC11.87□□□□□ -0.51
KRTAP4-9Q9BYQ8 DCD-201ENST00000293371 645 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
KRTAP4-9Q9BYQ8 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC11.77□□□□□ -0.53
KRTAP4-9Q9BYQ8 BNIP3P41-202ENST00000616656 861 ntBASIC11.65□□□□□ -0.54
KRTAP4-9Q9BYQ8 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
KRTAP4-9Q9BYQ8 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
KRTAP4-9Q9BYQ8 Metazoa_SRP.67-201ENST00000617099 296 ntBASIC11.54□□□□□ -0.56
KRTAP4-9Q9BYQ8 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC11.52□□□□□ -0.57
KRTAP4-9Q9BYQ8 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC11.52□□□□□ -0.57
KRTAP4-9Q9BYQ8 Metazoa_SRP.96-201ENST00000621315 318 ntBASIC11.46□□□□□ -0.57
KRTAP4-9Q9BYQ8 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
KRTAP4-9Q9BYQ8 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
KRTAP4-9Q9BYQ8 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
KRTAP4-9Q9BYQ8 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
KRTAP4-9Q9BYQ8 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
KRTAP4-9Q9BYQ8 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC11.31□□□□□ -0.6
KRTAP4-9Q9BYQ8 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
KRTAP4-9Q9BYQ8 TMEM14EP-202ENST00000639378 1296 ntBASIC11.26□□□□□ -0.61
KRTAP4-9Q9BYQ8 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
KRTAP4-9Q9BYQ8 UBE2Q2P6-202ENST00000617217 443 ntTSL 5 BASIC11.25□□□□□ -0.61
KRTAP4-9Q9BYQ8 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
KRTAP4-9Q9BYQ8 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
KRTAP4-9Q9BYQ8 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC11.24□□□□□ -0.61
KRTAP4-9Q9BYQ8 AC108359.1-201ENST00000616451 1211 ntBASIC11.22□□□□□ -0.61
KRTAP4-9Q9BYQ8 Z99916.3-201ENST00000623422 1080 ntBASIC11.22□□□□□ -0.61
KRTAP4-9Q9BYQ8 AL390728.6-201ENST00000566446 1246 ntBASIC11.21□□□□□ -0.61
KRTAP4-9Q9BYQ8 IFNA2-201ENST00000380206 1135 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
KRTAP4-9Q9BYQ8 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC11.17□□□□□ -0.62
KRTAP4-9Q9BYQ8 AC009446.1-201ENST00000519840 808 ntTSL 2 BASIC11.14□□□□□ -0.63
KRTAP4-9Q9BYQ8 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC11.1□□□□□ -0.63
KRTAP4-9Q9BYQ8 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC11.1□□□□□ -0.63
KRTAP4-9Q9BYQ8 AL365223.1-201ENST00000574864 1297 ntBASIC11.09□□□□□ -0.63
KRTAP4-9Q9BYQ8 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
KRTAP4-9Q9BYQ8 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
KRTAP4-9Q9BYQ8 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC11.06□□□□□ -0.64
KRTAP4-9Q9BYQ8 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
KRTAP4-9Q9BYQ8 KRTAP4-4-201ENST00000390661 1081 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
KRTAP4-9Q9BYQ8 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC11.04□□□□□ -0.64
KRTAP4-9Q9BYQ8 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
KRTAP4-9Q9BYQ8 AC006213.4-201ENST00000616184 634 ntBASIC11.02□□□□□ -0.65
KRTAP4-9Q9BYQ8 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC10.99□□□□□ -0.65
KRTAP4-9Q9BYQ8 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
KRTAP4-9Q9BYQ8 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
KRTAP4-9Q9BYQ8 AC008686.1-203ENST00000591826 463 ntTSL 2 BASIC10.98□□□□□ -0.65
KRTAP4-9Q9BYQ8 AC009948.4-201ENST00000604692 675 ntBASIC10.98□□□□□ -0.65
KRTAP4-9Q9BYQ8 IFNA4-201ENST00000421715 978 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
KRTAP4-9Q9BYQ8 LINC00437-201ENST00000414161 791 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
KRTAP4-9Q9BYQ8 AL355338.1-201ENST00000612598 913 ntTSL 2 BASIC10.95□□□□□ -0.66
KRTAP4-9Q9BYQ8 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC10.94□□□□□ -0.66
KRTAP4-9Q9BYQ8 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
KRTAP4-9Q9BYQ8 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC10.93□□□□□ -0.66
KRTAP4-9Q9BYQ8 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC10.93□□□□□ -0.66
KRTAP4-9Q9BYQ8 MIR583HG-201ENST00000507997 704 ntTSL 2 BASIC10.93□□□□□ -0.66
KRTAP4-9Q9BYQ8 AC013391.2-201ENST00000559041 501 ntTSL 5 BASIC10.92□□□□□ -0.66
KRTAP4-9Q9BYQ8 AKR1B10P2-201ENST00000577332 927 ntBASIC10.9□□□□□ -0.66
KRTAP4-9Q9BYQ8 RN7SL718P-201ENST00000581254 303 ntBASIC10.9□□□□□ -0.66
KRTAP4-9Q9BYQ8 AL078595.1-201ENST00000404458 226 ntBASIC10.89□□□□□ -0.67
KRTAP4-9Q9BYQ8 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
KRTAP4-9Q9BYQ8 CAMTA1-205ENST00000467404 546 ntTSL 3 BASIC10.87□□□□□ -0.67
KRTAP4-9Q9BYQ8 NIFKP4-201ENST00000567275 1192 ntBASIC10.85□□□□□ -0.67
KRTAP4-9Q9BYQ8 AC092068.1-201ENST00000592525 454 ntTSL 2 BASIC10.85□□□□□ -0.67
KRTAP4-9Q9BYQ8 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC10.84□□□□□ -0.67
KRTAP4-9Q9BYQ8 AC016180.1-201ENST00000567945 403 ntBASIC10.84□□□□□ -0.67
KRTAP4-9Q9BYQ8 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC10.83□□□□□ -0.68
KRTAP4-9Q9BYQ8 KATNBL1P2-201ENST00000433311 835 ntBASIC10.83□□□□□ -0.68
KRTAP4-9Q9BYQ8 ATP6V1G1-201ENST00000374050 1080 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
KRTAP4-9Q9BYQ8 ZNRF2P1-201ENST00000441407 443 ntBASIC10.82□□□□□ -0.68
KRTAP4-9Q9BYQ8 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC10.81□□□□□ -0.68
KRTAP4-9Q9BYQ8 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
KRTAP4-9Q9BYQ8 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
KRTAP4-9Q9BYQ8 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
KRTAP4-9Q9BYQ8 AC137695.1-201ENST00000604126 489 ntBASIC10.79□□□□□ -0.68
KRTAP4-9Q9BYQ8 AC020910.4-201ENST00000612269 540 ntBASIC10.79□□□□□ -0.68
KRTAP4-9Q9BYQ8 MTND4LP12-201ENST00000448237 295 ntBASIC10.78□□□□□ -0.68
KRTAP4-9Q9BYQ8 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
KRTAP4-9Q9BYQ8 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC10.76□□□□□ -0.69
KRTAP4-9Q9BYQ8 AC022079.1-201ENST00000621546 602 ntBASIC10.76□□□□□ -0.69
KRTAP4-9Q9BYQ8 SEPT7P7-201ENST00000420492 1301 ntBASIC10.76□□□□□ -0.69
KRTAP4-9Q9BYQ8 AL353729.2-201ENST00000605859 1249 ntBASIC10.75□□□□□ -0.69
KRTAP4-9Q9BYQ8 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC10.74□□□□□ -0.69
KRTAP4-9Q9BYQ8 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC10.74□□□□□ -0.69
KRTAP4-9Q9BYQ8 AC009712.1-201ENST00000564938 316 ntBASIC10.73□□□□□ -0.69
KRTAP4-9Q9BYQ8 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
KRTAP4-9Q9BYQ8 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
KRTAP4-9Q9BYQ8 AC098799.1-201ENST00000504752 800 ntBASIC10.72□□□□□ -0.69
KRTAP4-9Q9BYQ8 AC006077.2-201ENST00000623591 457 ntBASIC10.72□□□□□ -0.69
KRTAP4-9Q9BYQ8 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
KRTAP4-9Q9BYQ8 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC10.68□□□□□ -0.7
KRTAP4-9Q9BYQ8 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
KRTAP4-9Q9BYQ8 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC10.67□□□□□ -0.7
KRTAP4-9Q9BYQ8 AC022726.2-201ENST00000634673 547 ntBASIC10.67□□□□□ -0.7
KRTAP4-9Q9BYQ8 INO80B-203ENST00000409917 796 ntTSL 2 BASIC10.66□□□□□ -0.7
KRTAP4-9Q9BYQ8 AL355478.1-201ENST00000431686 821 ntTSL 5 BASIC10.65□□□□□ -0.7
KRTAP4-9Q9BYQ8 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC10.65□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms