RNA–Protein interactions for RNA: ENSMUST00000047835.7

Scaf11-201, Transcript of SR-related CTD-associated factor 11, mousemouse

TSL 5 BASIC

Gene Scaf11, Length 5,766 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf11-201ENSMUST00000047835 Ccl24Q9JKC0 119 aa14.56□□□□□ -0.08
Scaf11-201ENSMUST00000047835 Bud31Q6PGH1 103 aa14.56□□□□□ -0.08
Scaf11-201ENSMUST00000047835 PmvkQ9D1G2 192 aa14.56□□□□□ -0.08
Scaf11-201ENSMUST00000047835 Plekhb2Q9QZC7 221 aa14.56□□□□□ -0.08
Scaf11-201ENSMUST00000047835 Igkv3-2A0A075B5P0 119 aa14.56□□□□□ -0.08
Scaf11-201ENSMUST00000047835 Gm904Q3V2L5 102 aa14.56□□□□□ -0.08
Scaf11-201ENSMUST00000047835 TectaO08523 2155 aa14.56□□□□□ -0.08
Scaf11-201ENSMUST00000047835 Ighv1-74A0A0G2JGK2 117 aa14.56□□□□□ -0.08
Scaf11-201ENSMUST00000047835 P01786 117 aa14.56□□□□□ -0.08
Scaf11-201ENSMUST00000047835 Nckap5E9QAE1 1909 aa14.55□□□□□ -0.08
Scaf11-201ENSMUST00000047835 Trav3n-3A0A0G2JEM0 114 aa14.55□□□□□ -0.08
Scaf11-201ENSMUST00000047835 Pgpep1Q9ESW8 209 aa14.55□□□□□ -0.08
Scaf11-201ENSMUST00000047835 Nit2Q9JHW2 276 aa14.55□□□□□ -0.08
Scaf11-201ENSMUST00000047835 Gm28038F7BCN9 126 aa14.55□□□□□ -0.08
Scaf11-201ENSMUST00000047835 Gm20708H3BKF4 155 aa14.55□□□□□ -0.08
Scaf11-201ENSMUST00000047835 Vamp8O70404 101 aa14.55□□□□□ -0.08
Scaf11-201ENSMUST00000047835 Igfbpl1Q80W15 270 aa14.55□□□□□ -0.08
Scaf11-201ENSMUST00000047835 Ncor2Q9WU42 2472 aaKnown RBP14.55□□□□□ -0.08
Scaf11-201ENSMUST00000047835 Phpt1Q9DAK9 124 aa14.55□□□□□ -0.08
Scaf11-201ENSMUST00000047835 Id3P41133 119 aa14.54□□□□□ -0.08
Scaf11-201ENSMUST00000047835 8030423J24RikQ9CX45 142 aa14.54□□□□□ -0.08
Scaf11-201ENSMUST00000047835 Synj2bpQ9D6K5 145 aa14.54□□□□□ -0.08
Scaf11-201ENSMUST00000047835 Ighv1-19A0A0A6YWX0 117 aa14.54□□□□□ -0.08
Scaf11-201ENSMUST00000047835 Gm5089A1L3C8 106 aa14.54□□□□□ -0.08
Scaf11-201ENSMUST00000047835 Rs1Q9Z1L4 224 aa14.54□□□□□ -0.08
Scaf11-201ENSMUST00000047835 Abca1P41233 2261 aa14.54□□□□□ -0.08
Scaf11-201ENSMUST00000047835 9930022D16RikQ8BG27 128 aa14.54□□□□□ -0.08
Scaf11-201ENSMUST00000047835 Col5a3Q9JLI2 1739 aa14.54□□□□□ -0.08
Scaf11-201ENSMUST00000047835 DdtO35215 118 aa14.54□□□□□ -0.08
Scaf11-201ENSMUST00000047835 Pygo2Q80V76 405 aa14.54□□□□□ -0.08
Scaf11-201ENSMUST00000047835 Plxnb3Q9QY40 1902 aa14.54□□□□□ -0.08
Scaf11-201ENSMUST00000047835 Slamf6Q9ET39 351 aa14.53□□□□□ -0.08
Scaf11-201ENSMUST00000047835 Gm45717A0A1B0GT68 152 aa14.53□□□□□ -0.08
Scaf11-201ENSMUST00000047835 Gm815Q3UWS2 115 aa14.53□□□□□ -0.08
Scaf11-201ENSMUST00000047835 ColqO35348 457 aa14.53□□□□□ -0.08
Scaf11-201ENSMUST00000047835 P01643 108 aa14.53□□□□□ -0.08
Scaf11-201ENSMUST00000047835 Tex26Q0VB26 296 aa14.53□□□□□ -0.08
Scaf11-201ENSMUST00000047835 Igkv3-1A0A075B5P1 119 aa14.53□□□□□ -0.08
Scaf11-201ENSMUST00000047835 Gm12169F2Z474 250 aa14.53□□□□□ -0.08
Scaf11-201ENSMUST00000047835 Pfn1P62962 140 aa14.53□□□□□ -0.08
Scaf11-201ENSMUST00000047835 Spata25Q9DA57 226 aa14.52□□□□□ -0.08
Scaf11-201ENSMUST00000047835 RhohQ9D3G9 191 aa14.52□□□□□ -0.08
Scaf11-201ENSMUST00000047835 Col24a1Q30D77 1733 aa14.52□□□□□ -0.08
Scaf11-201ENSMUST00000047835 Ep300B2RWS6 2412 aa14.52□□□□□ -0.09
Scaf11-201ENSMUST00000047835 Trbv3A0A0A6YYE2 117 aa14.52□□□□□ -0.09
Scaf11-201ENSMUST00000047835 P01811 117 aa14.52□□□□□ -0.09
Scaf11-201ENSMUST00000047835 Gtsf1Q9DAN6 167 aa14.52□□□□□ -0.09
Scaf11-201ENSMUST00000047835 AtrxQ61687 2476 aaKnown RBP14.51□□□□□ -0.09
Scaf11-201ENSMUST00000047835 Gm33815A0A087WNV3 176 aa14.51□□□□□ -0.09
Scaf11-201ENSMUST00000047835 SonQ9QX47 2444 aaKnown RBP14.51□□□□□ -0.09
Scaf11-201ENSMUST00000047835 Chac1Q8R3J5 223 aa14.51□□□□□ -0.09
Scaf11-201ENSMUST00000047835 Zic4Q61467 341 aa14.51□□□□□ -0.09
Scaf11-201ENSMUST00000047835 Col13a1Q9R1N9 751 aa14.51□□□□□ -0.09
Scaf11-201ENSMUST00000047835 Dad1P61804 113 aa14.51□□□□□ -0.09
Scaf11-201ENSMUST00000047835 Col6a4A2AX52 2309 aa14.51□□□□□ -0.09
Scaf11-201ENSMUST00000047835 Igkv8-24A0A140T8P5 121 aa14.51□□□□□ -0.09
Scaf11-201ENSMUST00000047835 Gm10553J3QPF1 123 aa14.5□□□□□ -0.09
Scaf11-201ENSMUST00000047835 Tac4Q99N14 128 aa14.5□□□□□ -0.09
Scaf11-201ENSMUST00000047835 Nsun4C4P6S0 806 aaKnown RBP14.5□□□□□ -0.09
Scaf11-201ENSMUST00000047835 Ssbp1Q9CYR0 152 aaKnown RBP14.5□□□□□ -0.09
Scaf11-201ENSMUST00000047835 Tspan13Q9D8C2 204 aa14.5□□□□□ -0.09
Scaf11-201ENSMUST00000047835 Ighv5-9-1A0A0A6YVS4 126 aa14.5□□□□□ -0.09
Scaf11-201ENSMUST00000047835 P01738 130 aa14.5□□□□□ -0.09
Scaf11-201ENSMUST00000047835 SeboxP70368 190 aa14.5□□□□□ -0.09
Scaf11-201ENSMUST00000047835 5730522E02RikQ5SP45 163 aa14.5□□□□□ -0.09
Scaf11-201ENSMUST00000047835 Tm4sf20Q9CQY8 226 aa14.5□□□□□ -0.09
Scaf11-201ENSMUST00000047835 P01630 113 aa14.5□□□□□ -0.09
Scaf11-201ENSMUST00000047835 Zfp36l1P23950 338 aa14.5□□□□□ -0.09
Scaf11-201ENSMUST00000047835 P04940 107 aa14.49□□□□□ -0.09
Scaf11-201ENSMUST00000047835 P04941 107 aa14.49□□□□□ -0.09
Scaf11-201ENSMUST00000047835 Map6d1Q14BB9 191 aa14.49□□□□□ -0.09
Scaf11-201ENSMUST00000047835 Plac1Q9JI83 173 aa14.49□□□□□ -0.09
Scaf11-201ENSMUST00000047835 Nxph4G3X9N5 304 aa14.49□□□□□ -0.09
Scaf11-201ENSMUST00000047835 Gpx1P11352 201 aa14.49□□□□□ -0.09
Scaf11-201ENSMUST00000047835 Gm26938S4R185 226 aa14.49□□□□□ -0.09
Scaf11-201ENSMUST00000047835 Hint1P70349 126 aaKnown RBP14.49□□□□□ -0.09
Scaf11-201ENSMUST00000047835 P03985 172 aa14.49□□□□□ -0.09
Scaf11-201ENSMUST00000047835 Tmem86bQ497J1 226 aa14.49□□□□□ -0.09
Scaf11-201ENSMUST00000047835 Spag11Q8K4N2 71 aa14.49□□□□□ -0.09
Scaf11-201ENSMUST00000047835 Olfr1367Q8VFG2 316 aa14.49□□□□□ -0.09
Scaf11-201ENSMUST00000047835 Tnfrsf13bQ9ET35 249 aa14.49□□□□□ -0.09
Scaf11-201ENSMUST00000047835 Cd69P37217 199 aa14.48□□□□□ -0.09
Scaf11-201ENSMUST00000047835 Nup210Q9QY81 1886 aaKnown RBP14.48□□□□□ -0.09
Scaf11-201ENSMUST00000047835 Ccl17F6R5P4 103 aa14.48□□□□□ -0.09
Scaf11-201ENSMUST00000047835 Igkv4-81A0A0G2JEY5 119 aa14.48□□□□□ -0.09
Scaf11-201ENSMUST00000047835 BlcapP62951 87 aa14.48□□□□□ -0.09
Scaf11-201ENSMUST00000047835 Dmrt3Q80WT2 476 aa14.48□□□□□ -0.09
Scaf11-201ENSMUST00000047835 Gm21370Q3T9V6 190 aa14.47□□□□□ -0.09
Scaf11-201ENSMUST00000047835 Tmem238A9JSM3 176 aa14.47□□□□□ -0.09
Scaf11-201ENSMUST00000047835 Atp6v0bQ91V37 205 aa14.47□□□□□ -0.09
Scaf11-201ENSMUST00000047835 Lce6aD3YV94 81 aa14.47□□□□□ -0.09
Scaf11-201ENSMUST00000047835 Pom121l2Q5SW25 972 aa14.47□□□□□ -0.09
Scaf11-201ENSMUST00000047835 Ankrd39Q9D2X0 183 aa14.47□□□□□ -0.09
Scaf11-201ENSMUST00000047835 Lhfpl1Q80SV1 220 aa14.46□□□□□ -0.09
Scaf11-201ENSMUST00000047835 Prop1P97458 223 aa14.46□□□□□ -0.09
Scaf11-201ENSMUST00000047835 Rnf183Q8QZS5 190 aa14.46□□□□□ -0.09
Scaf11-201ENSMUST00000047835 Samd10Q7TST3 202 aa14.46□□□□□ -0.1
Scaf11-201ENSMUST00000047835 Arhgap21Q6DFV3 1944 aa14.46□□□□□ -0.1
Scaf11-201ENSMUST00000047835 Ighv1-64A0A075B5X3 117 aa14.45□□□□□ -0.1
Scaf11-201ENSMUST00000047835 Ube2cQ9D1C1 179 aa14.45□□□□□ -0.1
Retrieved 100 of 22,080 RNA–protein pairs in 146.7 ms