RNA–Protein interactions for RNA: ENSMUST00000043767.8

Upf3a-201, Transcript of MCG3697, isoform CRA_c, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3a, Length 2,057 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3a-201ENSMUST00000043767 Ighv5-16A0A0B4J1P4 117 aa17.54■□□□□ 0.4
Upf3a-201ENSMUST00000043767 Gm17654F7AXR3 209 aa17.54■□□□□ 0.4
Upf3a-201ENSMUST00000043767 CrygbP04344 175 aa17.54■□□□□ 0.4
Upf3a-201ENSMUST00000043767 AsipQ03288 131 aa17.54■□□□□ 0.4
Upf3a-201ENSMUST00000043767 Olfr477Q8VGI6 310 aa17.54■□□□□ 0.4
Upf3a-201ENSMUST00000043767 Arl3Q9WUL7 182 aa17.54■□□□□ 0.4
Upf3a-201ENSMUST00000043767 Tenm4Q3UHK6 2771 aa17.53■□□□□ 0.4
Upf3a-201ENSMUST00000043767 Scgb1b11A0A087WQJ0 93 aa17.53■□□□□ 0.4
Upf3a-201ENSMUST00000043767 Igkv4-71A0A0G2JEH0 117 aa17.53■□□□□ 0.4
Upf3a-201ENSMUST00000043767 IgipA0A1B0GR74 53 aa17.53■□□□□ 0.4
Upf3a-201ENSMUST00000043767 1810011H11RikE9PVZ2 95 aa17.53■□□□□ 0.4
Upf3a-201ENSMUST00000043767 Tcte2E9PY37 120 aa17.53■□□□□ 0.4
Upf3a-201ENSMUST00000043767 PgpQ8CHP8 321 aa17.53■□□□□ 0.4
Upf3a-201ENSMUST00000043767 Ms4a12A0A087WSB9 263 aa17.52■□□□□ 0.4
Upf3a-201ENSMUST00000043767 Gm4565A0A140LJ87 301 aa17.52■□□□□ 0.4
Upf3a-201ENSMUST00000043767 Gm6176J3QK59 301 aa17.52■□□□□ 0.4
Upf3a-201ENSMUST00000043767 Gm4567Q3UTA8 301 aa17.52■□□□□ 0.4
Upf3a-201ENSMUST00000043767 Q9DAA3 117 aa17.52■□□□□ 0.4
Upf3a-201ENSMUST00000043767 Obox7Q4KL20 218 aa17.52■□□□□ 0.39
Upf3a-201ENSMUST00000043767 PpbpQ9EQI5 113 aa17.52■□□□□ 0.39
Upf3a-201ENSMUST00000043767 Olfr745Q7TRL9 328 aa17.51■□□□□ 0.39
Upf3a-201ENSMUST00000043767 Klk10Q99M20 278 aa17.51■□□□□ 0.39
Upf3a-201ENSMUST00000043767 Atp6v0cP63082 155 aa17.51■□□□□ 0.39
Upf3a-201ENSMUST00000043767 Fbn1Q61554 2873 aaKnown RBP17.5■□□□□ 0.39
Upf3a-201ENSMUST00000043767 Trav7-5A0A0G2JFX6 112 aa17.5■□□□□ 0.39
Upf3a-201ENSMUST00000043767 Socs3O35718 225 aa17.5■□□□□ 0.39
Upf3a-201ENSMUST00000043767 Q9CR34 168 aa17.5■□□□□ 0.39
Upf3a-201ENSMUST00000043767 MsmbO08540 113 aa17.49■□□□□ 0.39
Upf3a-201ENSMUST00000043767 Rpp30O88796 268 aaKnown RBP17.49■□□□□ 0.39
Upf3a-201ENSMUST00000043767 MgpP19788 104 aa17.49■□□□□ 0.39
Upf3a-201ENSMUST00000043767 Znf580Q9DB38 172 aa17.49■□□□□ 0.39
Upf3a-201ENSMUST00000043767 Ighv7-4A0A0A6YXL5 121 aa17.49■□□□□ 0.39
Upf3a-201ENSMUST00000043767 Trav7-1A0A0G2JEV5 112 aa17.49■□□□□ 0.39
Upf3a-201ENSMUST00000043767 Scgb1b19F6WYW0 93 aa17.49■□□□□ 0.39
Upf3a-201ENSMUST00000043767 Gm6871L7N248 545 aa17.49■□□□□ 0.39
Upf3a-201ENSMUST00000043767 Gm26965M0QWH4 86 aa17.49■□□□□ 0.39
Upf3a-201ENSMUST00000043767 Srsf2Q62093 221 aaKnown RBP17.49■□□□□ 0.39
Upf3a-201ENSMUST00000043767 Wfdc15bQ9JHY4 80 aa17.49■□□□□ 0.39
Upf3a-201ENSMUST00000043767 Shisal1Q0VBP7 198 aa17.48■□□□□ 0.39
Upf3a-201ENSMUST00000043767 Leprotl1Q9CQ74 131 aa17.48■□□□□ 0.39
Upf3a-201ENSMUST00000043767 CicQ924A2 2510 aa17.48■□□□□ 0.39
Upf3a-201ENSMUST00000043767 SbsponQ3UPR9 264 aa17.48■□□□□ 0.39
Upf3a-201ENSMUST00000043767 Tmem177Q8BPE4 311 aa17.48■□□□□ 0.39
Upf3a-201ENSMUST00000043767 Olfr1402Q8VET1 320 aa17.48■□□□□ 0.39
Upf3a-201ENSMUST00000043767 Olfr810Q8VFH9 312 aa17.48■□□□□ 0.39
Upf3a-201ENSMUST00000043767 Atp6v0bQ91V37 205 aa17.48■□□□□ 0.39
Upf3a-201ENSMUST00000043767 SNORCQ9CXL7 121 aa17.48■□□□□ 0.39
Upf3a-201ENSMUST00000043767 AY761184Q9D848 116 aa17.48■□□□□ 0.39
Upf3a-201ENSMUST00000043767 Olfr869E9PX82 323 aa17.47■□□□□ 0.39
Upf3a-201ENSMUST00000043767 Them7Q9DCP4 223 aa17.47■□□□□ 0.39
Upf3a-201ENSMUST00000043767 Gm13030A2APQ6 143 aa17.46■□□□□ 0.39
Upf3a-201ENSMUST00000043767 Gm5150Q1AN92 299 aa17.46■□□□□ 0.39
Upf3a-201ENSMUST00000043767 Ndfip1Q8R0W6 221 aa17.46■□□□□ 0.39
Upf3a-201ENSMUST00000043767 Cend1Q9JKC6 149 aa17.46■□□□□ 0.39
Upf3a-201ENSMUST00000043767 P01812 117 aa17.46■□□□□ 0.39
Upf3a-201ENSMUST00000043767 Dazap1Q9JII5 406 aaKnown RBP17.46■□□□□ 0.39
Upf3a-201ENSMUST00000043767 Gm3072F6SKY8 209 aa17.45■□□□□ 0.38
Upf3a-201ENSMUST00000043767 Mapk1ip1lQ8BH93 242 aa17.45■□□□□ 0.38
Upf3a-201ENSMUST00000043767 Lamtor2Q9JHS3 125 aa17.45■□□□□ 0.38
Upf3a-201ENSMUST00000043767 Wnk1P83741 2377 aa17.45■□□□□ 0.38
Upf3a-201ENSMUST00000043767 Trav14-3A0A075B607 120 aa17.44■□□□□ 0.38
Upf3a-201ENSMUST00000043767 Golt1bQ9CR60 138 aa17.44■□□□□ 0.38
Upf3a-201ENSMUST00000043767 Gm20458E9PXJ7 78 aa17.44■□□□□ 0.38
Upf3a-201ENSMUST00000043767 Bri3P28662 125 aa17.44■□□□□ 0.38
Upf3a-201ENSMUST00000043767 Rchy1Q9CR50 261 aa17.44■□□□□ 0.38
Upf3a-201ENSMUST00000043767 KprpB2RUR4 657 aa17.43■□□□□ 0.38
Upf3a-201ENSMUST00000043767 Gm6096D3YTY6 151 aa17.43■□□□□ 0.38
Upf3a-201ENSMUST00000043767 Bub3Q9WVA3 326 aa17.43■□□□□ 0.38
Upf3a-201ENSMUST00000043767 Cd99Q8VCN6 175 aa17.43■□□□□ 0.38
Upf3a-201ENSMUST00000043767 Psmb2Q9R1P3 201 aa17.43■□□□□ 0.38
Upf3a-201ENSMUST00000043767 Trav6-4A0A075B6B4 115 aa17.42■□□□□ 0.38
Upf3a-201ENSMUST00000043767 Gm3233E9Q2H5 230 aa17.42■□□□□ 0.38
Upf3a-201ENSMUST00000043767 Hoxd3P09027 433 aa17.42■□□□□ 0.38
Upf3a-201ENSMUST00000043767 Olfr975Q8VG91 310 aa17.42■□□□□ 0.38
Upf3a-201ENSMUST00000043767 Hcfc2Q9D968 241 aa17.42■□□□□ 0.38
Upf3a-201ENSMUST00000043767 P01736 120 aa17.41■□□□□ 0.38
Upf3a-201ENSMUST00000043767 Cphx2Q8BX39 182 aa17.41■□□□□ 0.38
Upf3a-201ENSMUST00000043767 Ube2e2Q91W82 201 aa17.41■□□□□ 0.38
Upf3a-201ENSMUST00000043767 Ube2v1Q9CZY3 147 aa17.41■□□□□ 0.38
Upf3a-201ENSMUST00000043767 Gm8439G3UWA7 96 aa17.4■□□□□ 0.38
Upf3a-201ENSMUST00000043767 Igll1P20764 209 aa17.4■□□□□ 0.38
Upf3a-201ENSMUST00000043767 Gm5464Q3UY29 175 aa17.4■□□□□ 0.38
Upf3a-201ENSMUST00000043767 Fam213bQ9DB60 201 aa17.4■□□□□ 0.38
Upf3a-201ENSMUST00000043767 Zfp983E9PUT0 460 aa17.4■□□□□ 0.38
Upf3a-201ENSMUST00000043767 Gm10553J3QPF1 123 aa17.4■□□□□ 0.38
Upf3a-201ENSMUST00000043767 Saa4P31532 130 aa17.4■□□□□ 0.38
Upf3a-201ENSMUST00000043767 4930474N05RikQ8BVR5 218 aa17.4■□□□□ 0.38
Upf3a-201ENSMUST00000043767 Gm9767G3X930 207 aa17.39■□□□□ 0.37
Upf3a-201ENSMUST00000043767 Mrpl33Q9CQP0 65 aa17.39■□□□□ 0.37
Upf3a-201ENSMUST00000043767 Tomm40Q9QYA2 361 aa17.39■□□□□ 0.37
Upf3a-201ENSMUST00000043767 Igkv4-59A0A0B4J1I8 117 aa17.38■□□□□ 0.37
Upf3a-201ENSMUST00000043767 Olfr150Q60895 312 aa17.38■□□□□ 0.37
Upf3a-201ENSMUST00000043767 Vmn1r216Q8R257 298 aa17.38■□□□□ 0.37
Upf3a-201ENSMUST00000043767 NpyP57774 97 aa17.38■□□□□ 0.37
Upf3a-201ENSMUST00000043767 Olfr16Q62007 309 aa17.38■□□□□ 0.37
Upf3a-201ENSMUST00000043767 Chchd5Q9CQP3 110 aa17.38■□□□□ 0.37
Upf3a-201ENSMUST00000043767 Trav6-6A0A075B603 114 aa17.37■□□□□ 0.37
Upf3a-201ENSMUST00000043767 Tmem262D3Z338 116 aa17.37■□□□□ 0.37
Upf3a-201ENSMUST00000043767 Nat8f4G5E8L3 226 aa17.37■□□□□ 0.37
Upf3a-201ENSMUST00000043767 Fam222aQ6PGH4 453 aa17.37■□□□□ 0.37
Retrieved 100 of 22,080 RNA–protein pairs in 74.3 ms