Protein–RNA interactions for Protein: A0A140LJ87

Gm4565, Predicted gene 4513, mousemouse

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm4565A0A140LJ87 Gm25239-201ENSMUST00000174915 86 ntBASIC26.49■■□□□ 1.83
Gm4565A0A140LJ87 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Gm4565A0A140LJ87 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Gm4565A0A140LJ87 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC25.1■■□□□ 1.61
Gm4565A0A140LJ87 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Gm4565A0A140LJ87 Psd-208ENSMUST00000224556 2034 ntBASIC24.5■■□□□ 1.51
Gm4565A0A140LJ87 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Gm4565A0A140LJ87 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Gm4565A0A140LJ87 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Gm4565A0A140LJ87 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Gm4565A0A140LJ87 Gm15042-201ENSMUST00000120212 883 ntBASIC23.85■■□□□ 1.41
Gm4565A0A140LJ87 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
Gm4565A0A140LJ87 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Gm4565A0A140LJ87 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Gm4565A0A140LJ87 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC23.36■■□□□ 1.33
Gm4565A0A140LJ87 Gm15045-201ENSMUST00000117359 883 ntBASIC23.35■■□□□ 1.33
Gm4565A0A140LJ87 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Gm4565A0A140LJ87 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Gm4565A0A140LJ87 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Gm4565A0A140LJ87 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Gm4565A0A140LJ87 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
Gm4565A0A140LJ87 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
Gm4565A0A140LJ87 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Gm4565A0A140LJ87 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Gm4565A0A140LJ87 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Gm4565A0A140LJ87 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC22.76■■□□□ 1.23
Gm4565A0A140LJ87 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
Gm4565A0A140LJ87 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
Gm4565A0A140LJ87 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC22.72■■□□□ 1.23
Gm4565A0A140LJ87 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC22.71■■□□□ 1.23
Gm4565A0A140LJ87 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Gm4565A0A140LJ87 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
Gm4565A0A140LJ87 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
Gm4565A0A140LJ87 Gm24109-201ENSMUST00000175489 103 ntBASIC22.61■■□□□ 1.21
Gm4565A0A140LJ87 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC22.59■■□□□ 1.21
Gm4565A0A140LJ87 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Gm4565A0A140LJ87 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Gm4565A0A140LJ87 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Gm4565A0A140LJ87 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Gm4565A0A140LJ87 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Gm4565A0A140LJ87 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Gm4565A0A140LJ87 Gm23366-201ENSMUST00000175022 89 ntBASIC22.31■■□□□ 1.16
Gm4565A0A140LJ87 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Gm4565A0A140LJ87 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC22.29■■□□□ 1.16
Gm4565A0A140LJ87 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC22.26■■□□□ 1.15
Gm4565A0A140LJ87 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Gm4565A0A140LJ87 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Gm4565A0A140LJ87 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC22.2■■□□□ 1.14
Gm4565A0A140LJ87 Gm10524-201ENSMUST00000181931 1893 ntBASIC22.2■■□□□ 1.14
Gm4565A0A140LJ87 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Gm4565A0A140LJ87 Gm42596-201ENSMUST00000196305 1958 ntBASIC22.17■■□□□ 1.14
Gm4565A0A140LJ87 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Gm4565A0A140LJ87 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Gm4565A0A140LJ87 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Gm4565A0A140LJ87 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Gm4565A0A140LJ87 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Gm4565A0A140LJ87 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Gm4565A0A140LJ87 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Gm4565A0A140LJ87 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Gm4565A0A140LJ87 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Gm4565A0A140LJ87 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
Gm4565A0A140LJ87 AC153911.1-202ENSMUST00000218534 1034 ntBASIC21.86■■□□□ 1.09
Gm4565A0A140LJ87 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Gm4565A0A140LJ87 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Gm4565A0A140LJ87 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Gm4565A0A140LJ87 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Gm4565A0A140LJ87 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Gm4565A0A140LJ87 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC21.7■■□□□ 1.07
Gm4565A0A140LJ87 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Gm4565A0A140LJ87 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Gm4565A0A140LJ87 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Gm4565A0A140LJ87 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Gm4565A0A140LJ87 CT025624.2-201ENSMUST00000223609 1909 ntBASIC21.57■■□□□ 1.04
Gm4565A0A140LJ87 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Gm4565A0A140LJ87 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Gm4565A0A140LJ87 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Gm4565A0A140LJ87 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Gm4565A0A140LJ87 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
Gm4565A0A140LJ87 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Gm4565A0A140LJ87 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Gm4565A0A140LJ87 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC21.29■■□□□ 1
Gm4565A0A140LJ87 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Gm4565A0A140LJ87 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Gm4565A0A140LJ87 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Gm4565A0A140LJ87 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Gm4565A0A140LJ87 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Gm4565A0A140LJ87 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Gm4565A0A140LJ87 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Gm4565A0A140LJ87 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Gm4565A0A140LJ87 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Gm4565A0A140LJ87 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Gm4565A0A140LJ87 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC21.12■□□□□ 0.97
Gm4565A0A140LJ87 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Gm4565A0A140LJ87 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21.11■□□□□ 0.97
Gm4565A0A140LJ87 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Gm4565A0A140LJ87 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Gm4565A0A140LJ87 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Gm4565A0A140LJ87 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Gm4565A0A140LJ87 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Gm4565A0A140LJ87 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC21.01■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 246.8 ms