RNA–Protein interactions for RNA: ENSMUST00000028767.8

Rtf1-201, Transcript of RNA polymerase-associated protein RTF1 homolog, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rtf1, Length 4,664 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rtf1-201ENSMUST00000028767 Smim13E9Q942 88 aa11.63□□□□□ -0.55
Rtf1-201ENSMUST00000028767 P01724 129 aa11.63□□□□□ -0.55
Rtf1-201ENSMUST00000028767 P01727 129 aa11.63□□□□□ -0.55
Rtf1-201ENSMUST00000028767 Thap8E9Q695 213 aa11.63□□□□□ -0.55
Rtf1-201ENSMUST00000028767 Mob4Q6PEB6 225 aa11.63□□□□□ -0.55
Rtf1-201ENSMUST00000028767 9230109A22RikQ8BHE6 111 aa11.63□□□□□ -0.55
Rtf1-201ENSMUST00000028767 Fam24aQ8CF27 98 aa11.63□□□□□ -0.55
Rtf1-201ENSMUST00000028767 Josd1Q9DBJ6 202 aa11.63□□□□□ -0.55
Rtf1-201ENSMUST00000028767 Col4a2P08122 1707 aa11.63□□□□□ -0.55
Rtf1-201ENSMUST00000028767 Gm6040Q4QY32 63 aa11.63□□□□□ -0.55
Rtf1-201ENSMUST00000028767 Igfbpl1Q80W15 270 aa11.63□□□□□ -0.55
Rtf1-201ENSMUST00000028767 DscamQ9ERC8 2013 aa11.63□□□□□ -0.55
Rtf1-201ENSMUST00000028767 Scgb1b11A0A087WQJ0 93 aa11.63□□□□□ -0.55
Rtf1-201ENSMUST00000028767 KprpB2RUR4 657 aa11.63□□□□□ -0.55
Rtf1-201ENSMUST00000028767 Muc15Q8C6Z1 331 aa11.63□□□□□ -0.55
Rtf1-201ENSMUST00000028767 CompQ9R0G6 755 aa11.63□□□□□ -0.55
Rtf1-201ENSMUST00000028767 Ighv8-6A0A0A6YXA3 118 aa11.62□□□□□ -0.55
Rtf1-201ENSMUST00000028767 Ssbp1Q9CYR0 152 aaKnown RBP11.62□□□□□ -0.55
Rtf1-201ENSMUST00000028767 Lyzl1Q9CPX3 148 aa11.62□□□□□ -0.55
Rtf1-201ENSMUST00000028767 Trav19A0A0B4J1K4 119 aa11.62□□□□□ -0.55
Rtf1-201ENSMUST00000028767 Klf12O35738 402 aa11.62□□□□□ -0.55
Rtf1-201ENSMUST00000028767 PdpnQ62011 172 aa11.62□□□□□ -0.55
Rtf1-201ENSMUST00000028767 PpbpQ9EQI5 113 aa11.62□□□□□ -0.55
Rtf1-201ENSMUST00000028767 Ube2e1P52482 193 aa11.62□□□□□ -0.55
Rtf1-201ENSMUST00000028767 Prr3Q811B5 190 aaKnown RBP11.62□□□□□ -0.55
Rtf1-201ENSMUST00000028767 Zfp119aQ9JIC0 545 aa11.62□□□□□ -0.55
Rtf1-201ENSMUST00000028767 Ighv5-8A0A075B676 92 aa11.61□□□□□ -0.55
Rtf1-201ENSMUST00000028767 Nsun4C4P6S0 806 aaKnown RBP11.61□□□□□ -0.55
Rtf1-201ENSMUST00000028767 Ang4Q3TMQ6 144 aa11.61□□□□□ -0.55
Rtf1-201ENSMUST00000028767 Hcfc2Q9D968 241 aa11.61□□□□□ -0.55
Rtf1-201ENSMUST00000028767 Trav3n-3A0A0G2JEM0 114 aa11.61□□□□□ -0.55
Rtf1-201ENSMUST00000028767 Trdv2-1A0A0G2JGB9 116 aa11.61□□□□□ -0.55
Rtf1-201ENSMUST00000028767 Uqcc3Q8K2T4 89 aa11.61□□□□□ -0.55
Rtf1-201ENSMUST00000028767 Olfr1402Q8VET1 320 aa11.61□□□□□ -0.55
Rtf1-201ENSMUST00000028767 Olfr1195Q8VG21 308 aa11.61□□□□□ -0.55
Rtf1-201ENSMUST00000028767 Cby1Q9D1C2 127 aa11.61□□□□□ -0.55
Rtf1-201ENSMUST00000028767 Trav6d-7A0A075B6B0 112 aa11.6□□□□□ -0.55
Rtf1-201ENSMUST00000028767 Rpl13aP19253 203 aaKnown RBP11.6□□□□□ -0.55
Rtf1-201ENSMUST00000028767 Lypd1Q8BLC3 141 aa11.6□□□□□ -0.55
Rtf1-201ENSMUST00000028767 Lama1P19137 3084 aa11.6□□□□□ -0.55
Rtf1-201ENSMUST00000028767 Gm10521E9PZK0 135 aa11.6□□□□□ -0.55
Rtf1-201ENSMUST00000028767 Q3UNZ8 350 aa11.6□□□□□ -0.55
Rtf1-201ENSMUST00000028767 ApomQ9Z1R3 190 aa11.6□□□□□ -0.55
Rtf1-201ENSMUST00000028767 Gm16442D3YZG3 307 aa11.6□□□□□ -0.55
Rtf1-201ENSMUST00000028767 Tmem89Q9DA04 169 aa11.6□□□□□ -0.55
Rtf1-201ENSMUST00000028767 Gm26920S4R2A5 56 aa11.6□□□□□ -0.55
Rtf1-201ENSMUST00000028767 Pkd1l2Q7TN88 2461 aa11.6□□□□□ -0.55
Rtf1-201ENSMUST00000028767 Ighv1-22A0A075B5U7 117 aa11.6□□□□□ -0.55
Rtf1-201ENSMUST00000028767 Tmem136Q3TYE7 245 aa11.6□□□□□ -0.55
Rtf1-201ENSMUST00000028767 Rpl24Q8BP67 157 aaKnown RBP11.6□□□□□ -0.55
Rtf1-201ENSMUST00000028767 AamdcQ8R0P4 122 aa11.6□□□□□ -0.55
Rtf1-201ENSMUST00000028767 MgaA2AWL7 3003 aaKnown RBP11.6□□□□□ -0.55
Rtf1-201ENSMUST00000028767 SeleQ00690 612 aa11.59□□□□□ -0.55
Rtf1-201ENSMUST00000028767 Ammecr1lQ8JZZ6 310 aa11.59□□□□□ -0.55
Rtf1-201ENSMUST00000028767 Mrpl53Q9D1H8 118 aaKnown RBP11.59□□□□□ -0.55
Rtf1-201ENSMUST00000028767 Tmem52Q9D702 196 aa11.59□□□□□ -0.55
Rtf1-201ENSMUST00000028767 Pde6hP61249 83 aa11.59□□□□□ -0.55
Rtf1-201ENSMUST00000028767 Col13a1Q9R1N9 751 aa11.59□□□□□ -0.55
Rtf1-201ENSMUST00000028767 Ighv5-6A0A075B5Q0 117 aa11.59□□□□□ -0.55
Rtf1-201ENSMUST00000028767 Slc35d2Q762D5 326 aa11.59□□□□□ -0.55
Rtf1-201ENSMUST00000028767 Gm9958Q8C9U4 106 aa11.59□□□□□ -0.55
Rtf1-201ENSMUST00000028767 Ighv3-4A0A0A6YXF1 117 aa11.59□□□□□ -0.55
Rtf1-201ENSMUST00000028767 TcraP01849 138 aa11.59□□□□□ -0.55
Rtf1-201ENSMUST00000028767 Ang6Q5GAN0 147 aa11.59□□□□□ -0.55
Rtf1-201ENSMUST00000028767 Minos1Q7TNS2 76 aa11.59□□□□□ -0.55
Rtf1-201ENSMUST00000028767 Gm11733Q8BQP1 125 aa11.59□□□□□ -0.55
Rtf1-201ENSMUST00000028767 Mrpl36Q99N90 102 aa11.59□□□□□ -0.55
Rtf1-201ENSMUST00000028767 CklfQ9DAS1 152 aa11.59□□□□□ -0.55
Rtf1-201ENSMUST00000028767 Gm20481G3UXK4 153 aa11.58□□□□□ -0.56
Rtf1-201ENSMUST00000028767 P01791 123 aa11.58□□□□□ -0.56
Rtf1-201ENSMUST00000028767 Psg25Q497W1 475 aa11.58□□□□□ -0.56
Rtf1-201ENSMUST00000028767 Fbxl15Q91W61 300 aa11.58□□□□□ -0.56
Rtf1-201ENSMUST00000028767 Dkk2Q9QYZ8 259 aa11.58□□□□□ -0.56
Rtf1-201ENSMUST00000028767 IgipA0A1B0GR74 53 aa11.58□□□□□ -0.56
Rtf1-201ENSMUST00000028767 Cox7a2lQ61387 111 aa11.58□□□□□ -0.56
Rtf1-201ENSMUST00000028767 Ighv1-62-3P01754 117 aa11.58□□□□□ -0.56
Rtf1-201ENSMUST00000028767 P06334 169 aa11.58□□□□□ -0.56
Rtf1-201ENSMUST00000028767 3110018I06RikQ9CXS0 120 aa11.58□□□□□ -0.56
Rtf1-201ENSMUST00000028767 Them7Q9DCP4 223 aa11.57□□□□□ -0.56
Rtf1-201ENSMUST00000028767 Hist1h1tQ07133 208 aa11.57□□□□□ -0.56
Rtf1-201ENSMUST00000028767 Slc16a4Q8R0M8 500 aa11.57□□□□□ -0.56
Rtf1-201ENSMUST00000028767 Tomm40Q9QYA2 361 aa11.57□□□□□ -0.56
Rtf1-201ENSMUST00000028767 Col5a1O88207 1838 aa11.57□□□□□ -0.56
Rtf1-201ENSMUST00000028767 E030018B13RikJ3QMS9 113 aa11.57□□□□□ -0.56
Rtf1-201ENSMUST00000028767 NrgnP60761 78 aa11.57□□□□□ -0.56
Rtf1-201ENSMUST00000028767 9130213A22RikQ3V3T2 120 aa11.57□□□□□ -0.56
Rtf1-201ENSMUST00000028767 Fxyd7P59648 80 aa11.57□□□□□ -0.56
Rtf1-201ENSMUST00000028767 Olfr317Q5NCD6 327 aa11.57□□□□□ -0.56
Rtf1-201ENSMUST00000028767 CrygcQ61597 174 aa11.57□□□□□ -0.56
Rtf1-201ENSMUST00000028767 NpbQ8K4P1 119 aa11.57□□□□□ -0.56
Rtf1-201ENSMUST00000028767 Plekhb2Q9QZC7 221 aa11.57□□□□□ -0.56
Rtf1-201ENSMUST00000028767 Gkn1Q9CR36 201 aa11.56□□□□□ -0.56
Rtf1-201ENSMUST00000028767 Ighv1-80A0A075B5Y3 117 aa11.56□□□□□ -0.56
Rtf1-201ENSMUST00000028767 Trav6-4A0A075B6B4 115 aa11.56□□□□□ -0.56
Rtf1-201ENSMUST00000028767 Gm9242J3QNY1 357 aa11.56□□□□□ -0.56
Rtf1-201ENSMUST00000028767 NdpP48744 131 aa11.56□□□□□ -0.56
Rtf1-201ENSMUST00000028767 Rbfox3Q8BIF2 374 aa11.56□□□□□ -0.56
Rtf1-201ENSMUST00000028767 Gm29666A0A087WQ99 126 aa11.56□□□□□ -0.56
Rtf1-201ENSMUST00000028767 Snrpd3P62320 126 aaKnown RBP11.56□□□□□ -0.56
Rtf1-201ENSMUST00000028767 Olfr761Q7TRJ0 323 aa11.56□□□□□ -0.56
Retrieved 100 of 22,080 RNA–protein pairs in 298.6 ms