RNA–Protein interactions for RNA: ENST00000516965.1

SNORA48.10-201, Transcript of small nucleolar RNA, H/ACA box 48, humanhuman

BASIC

Gene SNORA48, Length 160 nt, Biotype snoRNA, Subcellular localisation Exosome, Nucleolus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA48.10-201ENST00000516965 H1FX-AS1Q4G0G2 97 aa0.67□□□□□ -2.3
SNORA48.10-201ENST00000516965 SMIM5Q71RC9 77 aa0.67□□□□□ -2.3
SNORA48.10-201ENST00000516965 UBL5Q9BZL1 73 aa0.67□□□□□ -2.3
SNORA48.10-201ENST00000516965 BCORQ6W2J9 1755 aa0.67□□□□□ -2.3
SNORA48.10-201ENST00000516965 NWD1Q149M9 1564 aa0.66□□□□□ -2.3
SNORA48.10-201ENST00000516965 CELSR2Q9HCU4 2923 aa0.66□□□□□ -2.3
SNORA48.10-201ENST00000516965 WIZO95785 1651 aa0.66□□□□□ -2.3
SNORA48.10-201ENST00000516965 PLCH1Q4KWH8 1693 aa0.66□□□□□ -2.3
SNORA48.10-201ENST00000516965 NDUFA3O95167 84 aa0.66□□□□□ -2.3
SNORA48.10-201ENST00000516965 LELP1Q5T871 98 aa0.66□□□□□ -2.3
SNORA48.10-201ENST00000516965 SPINK6Q6UWN8 80 aa0.66□□□□□ -2.3
SNORA48.10-201ENST00000516965 RALGAPBQ86X10 1494 aa0.66□□□□□ -2.3
SNORA48.10-201ENST00000516965 ZFYVE26Q68DK2 2539 aa0.66□□□□□ -2.3
SNORA48.10-201ENST00000516965 PREX1Q8TCU6 1659 aa0.65□□□□□ -2.3
SNORA48.10-201ENST00000516965 CCDC180Q9P1Z9 1646 aa0.65□□□□□ -2.31
SNORA48.10-201ENST00000516965 EIF2AK4Q9P2K8 1649 aaKnown RBP0.65□□□□□ -2.31
SNORA48.10-201ENST00000516965 CSMD3Q7Z407 3707 aa0.65□□□□□ -2.31
SNORA48.10-201ENST00000516965 PKDREJQ9NTG1 2253 aa0.65□□□□□ -2.31
SNORA48.10-201ENST00000516965 CDKN2A-AS1Q9UH64 79 aa0.65□□□□□ -2.31
SNORA48.10-201ENST00000516965 TSC2P49815 1807 aa0.65□□□□□ -2.31
SNORA48.10-201ENST00000516965 FRAS1Q86XX4 4008 aa0.65□□□□□ -2.31
SNORA48.10-201ENST00000516965 ATRQ13535 2644 aa0.65□□□□□ -2.31
SNORA48.10-201ENST00000516965 CHD6Q8TD26 2715 aa0.65□□□□□ -2.31
SNORA48.10-201ENST00000516965 DEFB109BQ30KR1 87 aa0.64□□□□□ -2.31
SNORA48.10-201ENST00000516965 IGF2RP11717 2491 aa0.64□□□□□ -2.31
SNORA48.10-201ENST00000516965 NRAPQ86VF7 1730 aa0.64□□□□□ -2.31
SNORA48.10-201ENST00000516965 PARP4Q9UKK3 1724 aaKnown RBP0.64□□□□□ -2.31
SNORA48.10-201ENST00000516965 CICQ96RK0 1608 aaPredicted RBP0.64□□□□□ -2.31
SNORA48.10-201ENST00000516965 NHSQ6T4R5 1651 aa0.63□□□□□ -2.31
SNORA48.10-201ENST00000516965 PRH1P02810 166 aa0.63□□□□□ -2.31
SNORA48.10-201ENST00000516965 SPTA1P02549 2419 aa0.63□□□□□ -2.31
SNORA48.10-201ENST00000516965 TNRC6CQ9HCJ0 1690 aaKnown RBP0.62□□□□□ -2.31
SNORA48.10-201ENST00000516965 SPINK4O60575 86 aa0.62□□□□□ -2.31
SNORA48.10-201ENST00000516965 MRPL33O75394 65 aaKnown RBP0.62□□□□□ -2.31
SNORA48.10-201ENST00000516965 FCER1GP30273 86 aa0.62□□□□□ -2.31
SNORA48.10-201ENST00000516965 COX6B2Q6YFQ2 88 aa0.62□□□□□ -2.31
SNORA48.10-201ENST00000516965 WFDC13Q8IUB5 93 aa0.62□□□□□ -2.31
SNORA48.10-201ENST00000516965 PRO3102Q9H379 93 aa0.62□□□□□ -2.31
SNORA48.10-201ENST00000516965 NESP48681 1621 aa0.62□□□□□ -2.31
SNORA48.10-201ENST00000516965 REV3LO60673 3130 aa0.62□□□□□ -2.31
SNORA48.10-201ENST00000516965 HMCN1Q96RW7 5635 aa0.61□□□□□ -2.31
SNORA48.10-201ENST00000516965 ETDCA0A1B0GVM5 59 aa0.61□□□□□ -2.31
SNORA48.10-201ENST00000516965 LINC00158P58513 81 aa0.61□□□□□ -2.31
SNORA48.10-201ENST00000516965 SMR3AQ99954 134 aa0.61□□□□□ -2.31
SNORA48.10-201ENST00000516965 KCNQ1DNQ9H478 68 aa0.61□□□□□ -2.31
SNORA48.10-201ENST00000516965 UNC79Q9P2D8 2635 aa0.61□□□□□ -2.31
SNORA48.10-201ENST00000516965 DDX60LQ5H9U9 1706 aaKnown RBP0.61□□□□□ -2.31
SNORA48.10-201ENST00000516965 KNL1Q8NG31 2342 aa0.6□□□□□ -2.31
SNORA48.10-201ENST00000516965 TRANK1O15050 2925 aa0.6□□□□□ -2.31
SNORA48.10-201ENST00000516965 SPINK1P00995 79 aa0.6□□□□□ -2.31
SNORA48.10-201ENST00000516965 TIAM1Q13009 1591 aa0.6□□□□□ -2.31
SNORA48.10-201ENST00000516965 ABCA6Q8N139 1617 aa0.6□□□□□ -2.31
SNORA48.10-201ENST00000516965 EEA1Q15075 1411 aa0.59□□□□□ -2.31
SNORA48.10-201ENST00000516965 DEFB131BA0A096LNP1 70 aa0.59□□□□□ -2.31
SNORA48.10-201ENST00000516965 CRIP1P50238 77 aa0.59□□□□□ -2.31
SNORA48.10-201ENST00000516965 K7EMI3 77 aa0.58□□□□□ -2.32
SNORA48.10-201ENST00000516965 KRTAP2-3P0C7H8 128 aa0.58□□□□□ -2.32
SNORA48.10-201ENST00000516965 KRTAP2-4Q9BYR9 128 aa0.58□□□□□ -2.32
SNORA48.10-201ENST00000516965 KRTAP2-1Q9BYU5 128 aa0.58□□□□□ -2.32
SNORA48.10-201ENST00000516965 PRXQ9BXM0 1461 aa0.58□□□□□ -2.32
SNORA48.10-201ENST00000516965 CPS1P31327 1500 aa0.58□□□□□ -2.32
SNORA48.10-201ENST00000516965 TJP1Q07157 1748 aa0.58□□□□□ -2.32
SNORA48.10-201ENST00000516965 M0R1W7 72 aa0.57□□□□□ -2.32
SNORA48.10-201ENST00000516965 TENM3Q9P273 2699 aa0.57□□□□□ -2.32
SNORA48.10-201ENST00000516965 GLI2P10070 1586 aa0.57□□□□□ -2.32
SNORA48.10-201ENST00000516965 WNK2Q9Y3S1 2297 aa0.57□□□□□ -2.32
SNORA48.10-201ENST00000516965 USP24Q9UPU5 2620 aa0.56□□□□□ -2.32
SNORA48.10-201ENST00000516965 ABCA2Q9BZC7 2435 aa0.56□□□□□ -2.32
SNORA48.10-201ENST00000516965 TENM4Q6N022 2769 aa0.56□□□□□ -2.32
SNORA48.10-201ENST00000516965 LOC730098B7Z3J9 87 aa0.56□□□□□ -2.32
SNORA48.10-201ENST00000516965 H0YAA0 97 aa0.56□□□□□ -2.32
SNORA48.10-201ENST00000516965 KRTAP21-1Q3LI58 79 aa0.56□□□□□ -2.32
SNORA48.10-201ENST00000516965 NCBP2-AS2Q69YL0 99 aa0.56□□□□□ -2.32
SNORA48.10-201ENST00000516965 VWFP04275 2813 aa0.56□□□□□ -2.32
SNORA48.10-201ENST00000516965 CHD8Q9HCK8 2581 aa0.56□□□□□ -2.32
SNORA48.10-201ENST00000516965 PDE4DIPQ5VU43 2346 aa0.56□□□□□ -2.32
SNORA48.10-201ENST00000516965 PLXNC1O60486 1568 aa0.56□□□□□ -2.32
SNORA48.10-201ENST00000516965 PTPN13Q12923 2485 aa0.56□□□□□ -2.32
SNORA48.10-201ENST00000516965 NAV2Q8IVL1 2488 aa0.56□□□□□ -2.32
SNORA48.10-201ENST00000516965 C4AP0C0L4 1744 aa0.55□□□□□ -2.32
SNORA48.10-201ENST00000516965 C4BP0C0L5 1744 aa0.55□□□□□ -2.32
SNORA48.10-201ENST00000516965 CSPG4Q6UVK1 2322 aa0.55□□□□□ -2.32
SNORA48.10-201ENST00000516965 NCOR1O75376 2440 aa0.55□□□□□ -2.32
SNORA48.10-201ENST00000516965 ABCC6O95255 1503 aa0.55□□□□□ -2.32
SNORA48.10-201ENST00000516965 ABCA10Q8WWZ4 1543 aa0.55□□□□□ -2.32
SNORA48.10-201ENST00000516965 DEFB114Q30KQ6 69 aa0.55□□□□□ -2.32
SNORA48.10-201ENST00000516965 NMES1Q9C002 83 aa0.55□□□□□ -2.32
SNORA48.10-201ENST00000516965 SYNE1Q8NF91 8797 aaKnown RBP0.55□□□□□ -2.32
SNORA48.10-201ENST00000516965 DSPP15924 2871 aaKnown RBP0.55□□□□□ -2.32
SNORA48.10-201ENST00000516965 THOC2Q8NI27 1593 aaKnown RBP0.54□□□□□ -2.32
SNORA48.10-201ENST00000516965 UGGT1Q9NYU2 1555 aa0.54□□□□□ -2.32
SNORA48.10-201ENST00000516965 UBR5O95071 2799 aaPredicted RBP0.54□□□□□ -2.32
SNORA48.10-201ENST00000516965 ALS2Q96Q42 1657 aa0.54□□□□□ -2.32
SNORA48.10-201ENST00000516965 U3KQA8 63 aa0.54□□□□□ -2.32
SNORA48.10-201ENST00000516965 OTOGQ6ZRI0 2925 aa0.54□□□□□ -2.32
SNORA48.10-201ENST00000516965 HECTD1Q9ULT8 2610 aa0.53□□□□□ -2.32
SNORA48.10-201ENST00000516965 BPTFQ12830 3046 aa0.53□□□□□ -2.32
SNORA48.10-201ENST00000516965 IAPPP10997 89 aa0.53□□□□□ -2.32
SNORA48.10-201ENST00000516965 SERF2P84101 59 aa0.53□□□□□ -2.32
SNORA48.10-201ENST00000516965 PREX2Q70Z35 1606 aa0.53□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms