RNA–Protein interactions for RNA: ENSMUST00000070797.6

Pcdha1-201, Transcript of Protocadherin alpha 1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Pcdha1, Length 5,248 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1-201ENSMUST00000070797 P01896 185 aa11.94□□□□□ -0.5
Pcdha1-201ENSMUST00000070797 Mrpl16Q99N93 251 aa11.94□□□□□ -0.5
Pcdha1-201ENSMUST00000070797 VsirQ9D659 308 aa11.94□□□□□ -0.5
Pcdha1-201ENSMUST00000070797 Trav14n-2A0A0G2JDF5 121 aa11.94□□□□□ -0.5
Pcdha1-201ENSMUST00000070797 Gm12845A0A0N4SUM5 588 aa11.94□□□□□ -0.5
Pcdha1-201ENSMUST00000070797 Znf691Q3TDE8 283 aa11.94□□□□□ -0.5
Pcdha1-201ENSMUST00000070797 F930015N05RikQ8C3A3 210 aa11.94□□□□□ -0.5
Pcdha1-201ENSMUST00000070797 Ighv1-26A0A075B5V0 117 aa11.94□□□□□ -0.5
Pcdha1-201ENSMUST00000070797 Trav12d-3A0A075B6A4 115 aa11.94□□□□□ -0.5
Pcdha1-201ENSMUST00000070797 Rpl32-psP17932 135 aa11.94□□□□□ -0.5
Pcdha1-201ENSMUST00000070797 Zg16Q8K0C5 167 aa11.94□□□□□ -0.5
Pcdha1-201ENSMUST00000070797 Prss28Q924N9 274 aa11.94□□□□□ -0.5
Pcdha1-201ENSMUST00000070797 StrcQ8VIM6 1809 aa11.94□□□□□ -0.5
Pcdha1-201ENSMUST00000070797 Gm17727E9Q4V7 109 aa11.94□□□□□ -0.5
Pcdha1-201ENSMUST00000070797 Pde6hP61249 83 aa11.94□□□□□ -0.5
Pcdha1-201ENSMUST00000070797 Spta1P08032 2415 aa11.93□□□□□ -0.5
Pcdha1-201ENSMUST00000070797 Tmem92B7ZWI3 162 aa11.93□□□□□ -0.5
Pcdha1-201ENSMUST00000070797 Znhit1Q8R331 154 aa11.93□□□□□ -0.5
Pcdha1-201ENSMUST00000070797 Cox7cP17665 63 aa11.93□□□□□ -0.5
Pcdha1-201ENSMUST00000070797 Igll1P20764 209 aa11.93□□□□□ -0.5
Pcdha1-201ENSMUST00000070797 Mllt11P97783 90 aa11.93□□□□□ -0.5
Pcdha1-201ENSMUST00000070797 Gm904Q3V2L5 102 aa11.93□□□□□ -0.5
Pcdha1-201ENSMUST00000070797 Gtsf1Q9DAN6 167 aa11.93□□□□□ -0.5
Pcdha1-201ENSMUST00000070797 Igkv13-85A0A075B666 115 aa11.93□□□□□ -0.5
Pcdha1-201ENSMUST00000070797 Klhdc3Q8VEM9 382 aa11.93□□□□□ -0.5
Pcdha1-201ENSMUST00000070797 Tax1bp3Q9DBG9 124 aa11.92□□□□□ -0.5
Pcdha1-201ENSMUST00000070797 Mcm3apQ9WUU9 1971 aa11.92□□□□□ -0.5
Pcdha1-201ENSMUST00000070797 Gm5294J3QP53 216 aa11.92□□□□□ -0.5
Pcdha1-201ENSMUST00000070797 P18526 117 aa11.92□□□□□ -0.5
Pcdha1-201ENSMUST00000070797 Slc25a16Q8C0K5 332 aa11.92□□□□□ -0.5
Pcdha1-201ENSMUST00000070797 Srp14P16254 110 aaKnown RBP11.92□□□□□ -0.5
Pcdha1-201ENSMUST00000070797 KncnQ307W7 124 aa11.92□□□□□ -0.5
Pcdha1-201ENSMUST00000070797 Gm10803Q3TZS6 135 aa11.92□□□□□ -0.5
Pcdha1-201ENSMUST00000070797 Trav6d-4Q5R1I0 115 aa11.92□□□□□ -0.5
Pcdha1-201ENSMUST00000070797 Cacna1bO55017 2327 aa11.92□□□□□ -0.5
Pcdha1-201ENSMUST00000070797 Ighv5-6A0A075B5Q0 117 aa11.92□□□□□ -0.5
Pcdha1-201ENSMUST00000070797 Gm10521E9PZK0 135 aa11.92□□□□□ -0.5
Pcdha1-201ENSMUST00000070797 IcosQ9WVS0 200 aa11.92□□□□□ -0.5
Pcdha1-201ENSMUST00000070797 Trav21-dv12A0A075B6C4 109 aa11.91□□□□□ -0.5
Pcdha1-201ENSMUST00000070797 Gm4792Q569Q2 183 aa11.91□□□□□ -0.5
Pcdha1-201ENSMUST00000070797 Gm10638F6QEG2 257 aa11.91□□□□□ -0.5
Pcdha1-201ENSMUST00000070797 Xcl1P47993 114 aa11.91□□□□□ -0.5
Pcdha1-201ENSMUST00000070797 Gm10645Q3UPY1 145 aa11.91□□□□□ -0.5
Pcdha1-201ENSMUST00000070797 Ifitm2Q99J93 144 aa11.91□□□□□ -0.5
Pcdha1-201ENSMUST00000070797 Igkv14-100A0A0G2JG36 117 aa11.91□□□□□ -0.5
Pcdha1-201ENSMUST00000070797 Pet100P0DJE0 76 aa11.91□□□□□ -0.5
Pcdha1-201ENSMUST00000070797 RflnaQ7TS73 204 aa11.91□□□□□ -0.5
Pcdha1-201ENSMUST00000070797 Parm1Q923D3 296 aa11.91□□□□□ -0.5
Pcdha1-201ENSMUST00000070797 P01736 120 aa11.91□□□□□ -0.5
Pcdha1-201ENSMUST00000070797 Zfp248Q640N4 576 aa11.91□□□□□ -0.5
Pcdha1-201ENSMUST00000070797 Ube2d2bQ6ZWY6 147 aa11.91□□□□□ -0.5
Pcdha1-201ENSMUST00000070797 D930007J09RikQ9D2K6 131 aa11.9□□□□□ -0.5
Pcdha1-201ENSMUST00000070797 Gm17660B9UIU9 90 aa11.9□□□□□ -0.5
Pcdha1-201ENSMUST00000070797 P01790 122 aa11.9□□□□□ -0.5
Pcdha1-201ENSMUST00000070797 LtaP09225 202 aa11.9□□□□□ -0.5
Pcdha1-201ENSMUST00000070797 RttnQ8R4Y8 2226 aa11.9□□□□□ -0.5
Pcdha1-201ENSMUST00000070797 Ighv1-7A0A075B5T7 117 aa11.9□□□□□ -0.5
Pcdha1-201ENSMUST00000070797 Trbv17A0A140T8P8 114 aa11.9□□□□□ -0.5
Pcdha1-201ENSMUST00000070797 Cpsf4lE9Q2N0 280 aa11.9□□□□□ -0.5
Pcdha1-201ENSMUST00000070797 Sap30O88574 220 aa11.9□□□□□ -0.5
Pcdha1-201ENSMUST00000070797 Rnf144bQ8BKD6 301 aa11.9□□□□□ -0.5
Pcdha1-201ENSMUST00000070797 Ighv1-34A0A075B5V2 117 aa11.9□□□□□ -0.51
Pcdha1-201ENSMUST00000070797 MalO09198 153 aa11.9□□□□□ -0.51
Pcdha1-201ENSMUST00000070797 Spint3Q3UW09 88 aa11.9□□□□□ -0.51
Pcdha1-201ENSMUST00000070797 EpopQ7TNS8 369 aa11.9□□□□□ -0.51
Pcdha1-201ENSMUST00000070797 Q9CQM1 111 aa11.9□□□□□ -0.51
Pcdha1-201ENSMUST00000070797 Trav4n-4A0A075B615 110 aa11.89□□□□□ -0.51
Pcdha1-201ENSMUST00000070797 OtofQ9ESF1 1997 aa11.89□□□□□ -0.51
Pcdha1-201ENSMUST00000070797 Gm26727M0QWT1 121 aa11.89□□□□□ -0.51
Pcdha1-201ENSMUST00000070797 P01783 136 aa11.89□□□□□ -0.51
Pcdha1-201ENSMUST00000070797 P01788 123 aa11.89□□□□□ -0.51
Pcdha1-201ENSMUST00000070797 Ang6Q5GAN0 147 aa11.89□□□□□ -0.51
Pcdha1-201ENSMUST00000070797 Ss18Q62280 418 aa11.89□□□□□ -0.51
Pcdha1-201ENSMUST00000070797 Scn5aQ9JJV9 2019 aa11.89□□□□□ -0.51
Pcdha1-201ENSMUST00000070797 Gm33815A0A087WNV3 176 aa11.89□□□□□ -0.51
Pcdha1-201ENSMUST00000070797 P0C1Z5 52 aa11.89□□□□□ -0.51
Pcdha1-201ENSMUST00000070797 Cr2P19070 1025 aa11.89□□□□□ -0.51
Pcdha1-201ENSMUST00000070797 Fxyd7P59648 80 aa11.89□□□□□ -0.51
Pcdha1-201ENSMUST00000070797 Them7Q9DCP4 223 aa11.88□□□□□ -0.51
Pcdha1-201ENSMUST00000070797 Trav7-1A0A0G2JEV5 112 aa11.88□□□□□ -0.51
Pcdha1-201ENSMUST00000070797 C330021F23RikQ8C7T0 141 aa11.88□□□□□ -0.51
Pcdha1-201ENSMUST00000070797 Heatr5bQ8C547 2070 aa11.88□□□□□ -0.51
Pcdha1-201ENSMUST00000070797 Apc2Q9Z1K7 2274 aa11.88□□□□□ -0.51
Pcdha1-201ENSMUST00000070797 P03980 138 aa11.88□□□□□ -0.51
Pcdha1-201ENSMUST00000070797 Ca1P13634 261 aa11.88□□□□□ -0.51
Pcdha1-201ENSMUST00000070797 Hist1h4aP62806 103 aaKnown RBP11.88□□□□□ -0.51
Pcdha1-201ENSMUST00000070797 PtprdQ64487 1912 aa11.88□□□□□ -0.51
Pcdha1-201ENSMUST00000070797 Brd3osA0A1B0GRB6 84 aa11.88□□□□□ -0.51
Pcdha1-201ENSMUST00000070797 Trav2Q5R1I9 109 aa11.88□□□□□ -0.51
Pcdha1-201ENSMUST00000070797 Rnf125Q9D9R0 233 aa11.88□□□□□ -0.51
Pcdha1-201ENSMUST00000070797 Gm43517E9PYS1 339 aa11.87□□□□□ -0.51
Pcdha1-201ENSMUST00000070797 H2-DMb1P35737 261 aa11.87□□□□□ -0.51
Pcdha1-201ENSMUST00000070797 Ndufa3Q9CQ91 84 aa11.87□□□□□ -0.51
Pcdha1-201ENSMUST00000070797 Lmo1Q924W9 156 aa11.87□□□□□ -0.51
Pcdha1-201ENSMUST00000070797 Mfap4Q9D1H9 257 aa11.87□□□□□ -0.51
Pcdha1-201ENSMUST00000070797 Wfdc2Q9DAU7 174 aa11.87□□□□□ -0.51
Pcdha1-201ENSMUST00000070797 Trav14-2A0A075B694 121 aa11.87□□□□□ -0.51
Pcdha1-201ENSMUST00000070797 Slc17a9Q8VCL5 447 aa11.87□□□□□ -0.51
Pcdha1-201ENSMUST00000070797 Shisa9Q9CZN4 424 aa11.87□□□□□ -0.51
Pcdha1-201ENSMUST00000070797 P01787 123 aa11.86□□□□□ -0.51
Retrieved 100 of 22,080 RNA–protein pairs in 31.9 ms