RNA–Protein interactions for RNA: ENSMUST00000070797.6

Pcdha1-201, Transcript of Protocadherin alpha 1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Pcdha1, Length 5,248 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1-201ENSMUST00000070797 Rpgrip1Q9EPQ2 1331 aa24.88■■□□□ 1.57
Pcdha1-201ENSMUST00000070797 Rhox8Q6VSS7 320 aa24.85■■□□□ 1.57
Pcdha1-201ENSMUST00000070797 Las1lA2BE28 776 aaKnown RBP23.84■■□□□ 1.41
Pcdha1-201ENSMUST00000070797 Cngb1E1AZ71 1325 aa23.53■■□□□ 1.36
Pcdha1-201ENSMUST00000070797 Ehmt2Q9Z148 1263 aaKnown RBP23.03■■□□□ 1.28
Pcdha1-201ENSMUST00000070797 Pelp1Q9DBD5 1123 aaKnown RBP22.91■■□□□ 1.26
Pcdha1-201ENSMUST00000070797 Acin1Q9JIX8 1338 aaKnown RBP22.77■■□□□ 1.24
Pcdha1-201ENSMUST00000070797 CenpbP27790 599 aa22.6■■□□□ 1.21
Pcdha1-201ENSMUST00000070797 Wdr66E9Q743 1299 aa22.58■■□□□ 1.21
Pcdha1-201ENSMUST00000070797 Myt1Q8CFC2 1127 aa22.54■■□□□ 1.2
Pcdha1-201ENSMUST00000070797 Zeb1Q64318 1117 aa22.47■■□□□ 1.19
Pcdha1-201ENSMUST00000070797 NefmP08553 848 aa22.16■■□□□ 1.14
Pcdha1-201ENSMUST00000070797 Ccdc180J3QNE4 1664 aa22.13■■□□□ 1.13
Pcdha1-201ENSMUST00000070797 Pcgf6Q99NA9 353 aa22.12■■□□□ 1.13
Pcdha1-201ENSMUST00000070797 NischQ80TM9 1593 aa22.05■■□□□ 1.12
Pcdha1-201ENSMUST00000070797 Ccdc136Q3TVA9 1136 aa22■■□□□ 1.11
Pcdha1-201ENSMUST00000070797 Rtl1Q7M732 1744 aa21.96■■□□□ 1.11
Pcdha1-201ENSMUST00000070797 Trim41Q5NCC3 630 aa21.9■■□□□ 1.1
Pcdha1-201ENSMUST00000070797 Amer1Q7TS75 1132 aa21.85■■□□□ 1.09
Pcdha1-201ENSMUST00000070797 Stra8P70278 393 aa21.84■■□□□ 1.09
Pcdha1-201ENSMUST00000070797 Cdk11bP24788 784 aaKnown RBP21.74■■□□□ 1.07
Pcdha1-201ENSMUST00000070797 HrcG5E8J6 738 aa21.72■■□□□ 1.07
Pcdha1-201ENSMUST00000070797 Gab3Q8BSM5 595 aa21.72■■□□□ 1.07
Pcdha1-201ENSMUST00000070797 Esf1Q3V1V3 845 aaKnown RBP21.59■■□□□ 1.05
Pcdha1-201ENSMUST00000070797 Tnnt3Q9QZ47 272 aa21.59■■□□□ 1.05
Pcdha1-201ENSMUST00000070797 Supt5hO55201 1082 aaKnown RBP21.46■■□□□ 1.03
Pcdha1-201ENSMUST00000070797 Rtl5Q5DTT4 599 aa21.45■■□□□ 1.02
Pcdha1-201ENSMUST00000070797 DiexfQ8BTT6 772 aaKnown RBP21.45■■□□□ 1.02
Pcdha1-201ENSMUST00000070797 Ube2uB1AUC4 352 aa21.43■■□□□ 1.02
Pcdha1-201ENSMUST00000070797 Nop58Q6DFW4 536 aaKnown RBP21.43■■□□□ 1.02
Pcdha1-201ENSMUST00000070797 Npm2Q80W85 207 aa21.32■■□□□ 1
Pcdha1-201ENSMUST00000070797 UbtfP25976 765 aaKnown RBP21.29■■□□□ 1
Pcdha1-201ENSMUST00000070797 Myt1lP97500 1187 aa21.21■□□□□ 0.99
Pcdha1-201ENSMUST00000070797 Ttbk1Q6PCN3 1308 aa21.16■□□□□ 0.98
Pcdha1-201ENSMUST00000070797 4933416C03RikQ3V063 378 aa21.11■□□□□ 0.97
Pcdha1-201ENSMUST00000070797 4930567H17RikQ3V0K5 233 aa21.04■□□□□ 0.96
Pcdha1-201ENSMUST00000070797 Slc24a1Q91WD8 1130 aa21.03■□□□□ 0.96
Pcdha1-201ENSMUST00000070797 Neurod1Q60867 357 aa21.01■□□□□ 0.95
Pcdha1-201ENSMUST00000070797 Anks4bQ8K3X6 423 aa20.95■□□□□ 0.94
Pcdha1-201ENSMUST00000070797 Aplp2Q06335 707 aa20.91■□□□□ 0.94
Pcdha1-201ENSMUST00000070797 Abcc9P70170 1546 aa20.91■□□□□ 0.94
Pcdha1-201ENSMUST00000070797 Anp32aO35381 247 aa20.9■□□□□ 0.94
Pcdha1-201ENSMUST00000070797 TonslQ6NZL6 1363 aa20.87■□□□□ 0.93
Pcdha1-201ENSMUST00000070797 ClspnQ80YR7 1315 aa20.85■□□□□ 0.93
Pcdha1-201ENSMUST00000070797 NrdcQ8BHG1 1161 aa20.82■□□□□ 0.92
Pcdha1-201ENSMUST00000070797 Dcaf1Q80TR8 1506 aa20.81■□□□□ 0.92
Pcdha1-201ENSMUST00000070797 Mier1Q5UAK0 511 aa20.77■□□□□ 0.92
Pcdha1-201ENSMUST00000070797 NeflP08551 543 aa20.76■□□□□ 0.91
Pcdha1-201ENSMUST00000070797 Csrnp3P59055 597 aa20.7■□□□□ 0.9
Pcdha1-201ENSMUST00000070797 NclP09405 707 aaKnown RBP20.68■□□□□ 0.9
Pcdha1-201ENSMUST00000070797 Anp32bQ9EST5 272 aaKnown RBP20.62■□□□□ 0.89
Pcdha1-201ENSMUST00000070797 Eif5bQ05D44 1216 aaKnown RBP20.62■□□□□ 0.89
Pcdha1-201ENSMUST00000070797 Ppargc1bQ8VHJ7 1014 aa20.62■□□□□ 0.89
Pcdha1-201ENSMUST00000070797 Sall2Q9QX96 1004 aa20.52■□□□□ 0.88
Pcdha1-201ENSMUST00000070797 Ccdc9Q8VC31 543 aaKnown RBP20.39■□□□□ 0.86
Pcdha1-201ENSMUST00000070797 DaxxO35613 739 aa20.38■□□□□ 0.85
Pcdha1-201ENSMUST00000070797 Fam50aQ9WV03 339 aaKnown RBP20.36■□□□□ 0.85
Pcdha1-201ENSMUST00000070797 1700123L14RikQ3V2K7 440 aa20.36■□□□□ 0.85
Pcdha1-201ENSMUST00000070797 Gm38655A0A286YDK6 273 aa20.34■□□□□ 0.85
Pcdha1-201ENSMUST00000070797 Abcc8B2RUS7 1588 aa20.33■□□□□ 0.84
Pcdha1-201ENSMUST00000070797 Il27Q8K3I6 234 aa20.29■□□□□ 0.84
Pcdha1-201ENSMUST00000070797 Zcchc6Q5BLK4 1491 aaKnown RBP20.22■□□□□ 0.83
Pcdha1-201ENSMUST00000070797 Cep164Q5DU05 1446 aa20.18■□□□□ 0.82
Pcdha1-201ENSMUST00000070797 Calr4Q3TQS0 420 aa20.15■□□□□ 0.82
Pcdha1-201ENSMUST00000070797 Ap3b1Q9Z1T1 1105 aa20.12■□□□□ 0.81
Pcdha1-201ENSMUST00000070797 Gm35339A0A140LHH9 1649 aa20.12■□□□□ 0.81
Pcdha1-201ENSMUST00000070797 Bcl11aQ9QYE3 773 aa20.1■□□□□ 0.81
Pcdha1-201ENSMUST00000070797 Hsp90aa1P07901 733 aaKnown RBP20.06■□□□□ 0.8
Pcdha1-201ENSMUST00000070797 Fam71e1A1L3C1 212 aa20■□□□□ 0.79
Pcdha1-201ENSMUST00000070797 Ppp4r2Q0VGB7 417 aa20■□□□□ 0.79
Pcdha1-201ENSMUST00000070797 Wdr43Q6ZQL4 677 aaKnown RBP19.99■□□□□ 0.79
Pcdha1-201ENSMUST00000070797 Plekhg3Q4VAC9 1341 aa19.88■□□□□ 0.77
Pcdha1-201ENSMUST00000070797 Mapk8ip2Q9ERE9 830 aa19.88■□□□□ 0.77
Pcdha1-201ENSMUST00000070797 Ythdc1E9Q5K9 736 aaKnown RBP19.84■□□□□ 0.77
Pcdha1-201ENSMUST00000070797 Upf2A2AT37 1269 aaKnown RBP19.84■□□□□ 0.77
Pcdha1-201ENSMUST00000070797 Ccdc27Q3V036 639 aa19.83■□□□□ 0.76
Pcdha1-201ENSMUST00000070797 Ccer2J3QPU5 274 aa19.82■□□□□ 0.76
Pcdha1-201ENSMUST00000070797 Os9Q8K2C7 672 aa19.73■□□□□ 0.75
Pcdha1-201ENSMUST00000070797 Eid3Q3V124 375 aa19.71■□□□□ 0.75
Pcdha1-201ENSMUST00000070797 Clip1Q922J3 1391 aa19.71■□□□□ 0.75
Pcdha1-201ENSMUST00000070797 Aebp2Q9Z248 504 aaKnown RBP19.65■□□□□ 0.74
Pcdha1-201ENSMUST00000070797 Irx3P81067 507 aa19.64■□□□□ 0.73
Pcdha1-201ENSMUST00000070797 Npm1Q61937 292 aaKnown RBP19.63■□□□□ 0.73
Pcdha1-201ENSMUST00000070797 Brd4Q9ESU6 1400 aaKnown RBP19.61■□□□□ 0.73
Pcdha1-201ENSMUST00000070797 Chic1Q8CBW7 227 aa19.57■□□□□ 0.72
Pcdha1-201ENSMUST00000070797 Lmod2Q3UHZ5 550 aa19.56■□□□□ 0.72
Pcdha1-201ENSMUST00000070797 Mrs2Q5NCE8 434 aa19.55■□□□□ 0.72
Pcdha1-201ENSMUST00000070797 Nlrp6Q91WS2 869 aa19.51■□□□□ 0.71
Pcdha1-201ENSMUST00000070797 CanxP35564 591 aaKnown RBP19.5■□□□□ 0.71
Pcdha1-201ENSMUST00000070797 Trim44Q9QXA7 346 aa19.5■□□□□ 0.71
Pcdha1-201ENSMUST00000070797 ArxO35085 564 aa19.49■□□□□ 0.71
Pcdha1-201ENSMUST00000070797 Hnrnpul2Q00PI9 745 aaKnown RBP19.48■□□□□ 0.71
Pcdha1-201ENSMUST00000070797 Htatsf1Q8BGC0 757 aa19.42■□□□□ 0.7
Pcdha1-201ENSMUST00000070797 Rb1cc1Q9ESK9 1588 aa19.42■□□□□ 0.7
Pcdha1-201ENSMUST00000070797 Hdac5Q9Z2V6 1113 aa19.4■□□□□ 0.7
Pcdha1-201ENSMUST00000070797 SafbD3YXK2 937 aaKnown RBP19.37■□□□□ 0.69
Pcdha1-201ENSMUST00000070797 Ppm1gQ61074 542 aa19.34■□□□□ 0.69
Pcdha1-201ENSMUST00000070797 Hsp90ab1P11499 724 aaKnown RBP19.33■□□□□ 0.69
Pcdha1-201ENSMUST00000070797 CatipB9EKE5 520 aa19.33■□□□□ 0.69
Pcdha1-201ENSMUST00000070797 Polr3glQ8R0C0 218 aa19.33■□□□□ 0.68
Retrieved 100 of 22,080 RNA–protein pairs in 14.9 ms