RNA–Protein interactions for RNA: ENSMUST00000044166.8

Cdc40-201, Transcript of Pre-mRNA-processing factor 17, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cdc40, Length 3,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40-201ENSMUST00000044166 Cdv3Q4VAA2 281 aaKnown RBP6.73□□□□□ -1.33
Cdc40-201ENSMUST00000044166 Olfr25Q7TRD6 313 aa6.73□□□□□ -1.33
Cdc40-201ENSMUST00000044166 Olfr492Q8VFD1 314 aa6.73□□□□□ -1.33
Cdc40-201ENSMUST00000044166 MgaA2AWL7 3003 aaKnown RBP6.73□□□□□ -1.33
Cdc40-201ENSMUST00000044166 Zfhx3Q61329 3726 aa6.73□□□□□ -1.33
Cdc40-201ENSMUST00000044166 2310009B15RikA0A0A6YWI4 143 aa6.73□□□□□ -1.33
Cdc40-201ENSMUST00000044166 Zfp976E9Q981 636 aa6.73□□□□□ -1.33
Cdc40-201ENSMUST00000044166 Olfr143P34985 313 aa6.73□□□□□ -1.33
Cdc40-201ENSMUST00000044166 Col8a1Q00780 744 aa6.73□□□□□ -1.33
Cdc40-201ENSMUST00000044166 Foxl1Q64731 336 aa6.73□□□□□ -1.33
Cdc40-201ENSMUST00000044166 Q9CR34 168 aa6.73□□□□□ -1.33
Cdc40-201ENSMUST00000044166 Ppp1r27Q9D119 154 aa6.73□□□□□ -1.33
Cdc40-201ENSMUST00000044166 Mmp17Q9R0S3 578 aa6.73□□□□□ -1.33
Cdc40-201ENSMUST00000044166 Timm8a1Q9WVA2 97 aa6.73□□□□□ -1.33
Cdc40-201ENSMUST00000044166 ArtnQ9Z0L2 224 aa6.73□□□□□ -1.33
Cdc40-201ENSMUST00000044166 Col4a4Q9QZR9 1682 aa6.73□□□□□ -1.33
Cdc40-201ENSMUST00000044166 Trav6d-3A0A075B6B3 112 aa6.72□□□□□ -1.33
Cdc40-201ENSMUST00000044166 Ighv9-2A0A0B4J1J4 117 aa6.72□□□□□ -1.33
Cdc40-201ENSMUST00000044166 Igkv1-131A0A140T8M8 120 aa6.72□□□□□ -1.33
Cdc40-201ENSMUST00000044166 Ca1P13634 261 aa6.72□□□□□ -1.33
Cdc40-201ENSMUST00000044166 Defa3P28310 93 aa6.72□□□□□ -1.33
Cdc40-201ENSMUST00000044166 Defa10P50708 93 aa6.72□□□□□ -1.33
Cdc40-201ENSMUST00000044166 Defa15P50713 93 aa6.72□□□□□ -1.33
Cdc40-201ENSMUST00000044166 Ms4a13Q5FWC3 203 aa6.72□□□□□ -1.33
Cdc40-201ENSMUST00000044166 Trav6-3Q5R1E6 112 aa6.72□□□□□ -1.33
Cdc40-201ENSMUST00000044166 Prdx2Q61171 198 aaKnown RBP6.72□□□□□ -1.33
Cdc40-201ENSMUST00000044166 Duxbl2Q7TNE6 350 aa6.72□□□□□ -1.33
Cdc40-201ENSMUST00000044166 Nabp2Q8R2Y9 212 aa6.72□□□□□ -1.33
Cdc40-201ENSMUST00000044166 Olfr894Q9EQB2 313 aa6.72□□□□□ -1.33
Cdc40-201ENSMUST00000044166 Ighv9-3A0A0B4J1J5 117 aa6.72□□□□□ -1.33
Cdc40-201ENSMUST00000044166 MyadmO35682 320 aaKnown RBP6.72□□□□□ -1.33
Cdc40-201ENSMUST00000044166 Tnfsf12O54907 249 aa6.72□□□□□ -1.33
Cdc40-201ENSMUST00000044166 CckP09240 115 aa6.72□□□□□ -1.33
Cdc40-201ENSMUST00000044166 Defa16P50714 93 aa6.72□□□□□ -1.33
Cdc40-201ENSMUST00000044166 Znf641Q8BZ34 422 aa6.72□□□□□ -1.33
Cdc40-201ENSMUST00000044166 Trib1Q8K4K4 372 aa6.72□□□□□ -1.33
Cdc40-201ENSMUST00000044166 Cldn16Q925N4 235 aa6.72□□□□□ -1.33
Cdc40-201ENSMUST00000044166 Ssbp3Q9D032 388 aa6.72□□□□□ -1.33
Cdc40-201ENSMUST00000044166 Kiaa1549Q68FD9 1940 aa6.72□□□□□ -1.33
Cdc40-201ENSMUST00000044166 Trav12-3A0A075B648 115 aa6.72□□□□□ -1.33
Cdc40-201ENSMUST00000044166 Trbv30A0A0B4J1P1 111 aa6.72□□□□□ -1.33
Cdc40-201ENSMUST00000044166 P01723 117 aa6.72□□□□□ -1.33
Cdc40-201ENSMUST00000044166 Rnase9P60154 184 aa6.72□□□□□ -1.33
Cdc40-201ENSMUST00000044166 Nkx3-1P97436 237 aa6.72□□□□□ -1.33
Cdc40-201ENSMUST00000044166 Sox21Q811W0 276 aa6.72□□□□□ -1.33
Cdc40-201ENSMUST00000044166 Gm4894Q8CA09 118 aa6.72□□□□□ -1.33
Cdc40-201ENSMUST00000044166 Ly6g5bQ8K1T4 194 aa6.72□□□□□ -1.33
Cdc40-201ENSMUST00000044166 Siglec12Q91Y57 467 aa6.72□□□□□ -1.33
Cdc40-201ENSMUST00000044166 Tmem190Q9D2E9 166 aa6.72□□□□□ -1.33
Cdc40-201ENSMUST00000044166 Arhgef17Q80U35 2057 aa6.71□□□□□ -1.33
Cdc40-201ENSMUST00000044166 Ighv5-17A0A075B5R1 117 aa6.71□□□□□ -1.33
Cdc40-201ENSMUST00000044166 Trav7n-4A0A075B620 113 aa6.71□□□□□ -1.33
Cdc40-201ENSMUST00000044166 TracA0A075B662 137 aa6.71□□□□□ -1.33
Cdc40-201ENSMUST00000044166 3110082J24RikF6Z6Z2 108 aa6.71□□□□□ -1.33
Cdc40-201ENSMUST00000044166 TcraP01849 138 aa6.71□□□□□ -1.33
Cdc40-201ENSMUST00000044166 GchfrP99025 84 aa6.71□□□□□ -1.33
Cdc40-201ENSMUST00000044166 Vwc2lQ505H4 222 aa6.71□□□□□ -1.33
Cdc40-201ENSMUST00000044166 Vmn1r195Q5SVD6 316 aa6.71□□□□□ -1.33
Cdc40-201ENSMUST00000044166 Cd200r3Q5UKY4 296 aa6.71□□□□□ -1.33
Cdc40-201ENSMUST00000044166 Olfr982Q8VGB3 321 aa6.71□□□□□ -1.33
Cdc40-201ENSMUST00000044166 Ccl28Q9JIL2 130 aa6.71□□□□□ -1.33
Cdc40-201ENSMUST00000044166 Ramp3Q9WUP1 147 aa6.71□□□□□ -1.33
Cdc40-201ENSMUST00000044166 F5O88783 2183 aa6.71□□□□□ -1.33
Cdc40-201ENSMUST00000044166 Cldn34c3J3QJW5 233 aa6.71□□□□□ -1.34
Cdc40-201ENSMUST00000044166 Cldn34c2J3QNM1 233 aa6.71□□□□□ -1.34
Cdc40-201ENSMUST00000044166 ApcsP12246 224 aa6.71□□□□□ -1.34
Cdc40-201ENSMUST00000044166 Ercc8Q8CFD5 397 aa6.71□□□□□ -1.34
Cdc40-201ENSMUST00000044166 Cldn34c1Q8K193 234 aa6.71□□□□□ -1.34
Cdc40-201ENSMUST00000044166 Olfr481Q8VGI5 312 aa6.71□□□□□ -1.34
Cdc40-201ENSMUST00000044166 Wdr31Q9JHB4 367 aa6.71□□□□□ -1.34
Cdc40-201ENSMUST00000044166 Egr4Q9WUF2 478 aa6.71□□□□□ -1.34
Cdc40-201ENSMUST00000044166 Cacna1gQ5SUF7 2381 aa6.71□□□□□ -1.34
Cdc40-201ENSMUST00000044166 Olfr1189A2AV11 306 aa6.71□□□□□ -1.34
Cdc40-201ENSMUST00000044166 Cd3eP22646 189 aa6.71□□□□□ -1.34
Cdc40-201ENSMUST00000044166 Reg1P43137 165 aa6.71□□□□□ -1.34
Cdc40-201ENSMUST00000044166 SlpiP97430 131 aa6.71□□□□□ -1.34
Cdc40-201ENSMUST00000044166 Pate4Q09098 99 aa6.71□□□□□ -1.34
Cdc40-201ENSMUST00000044166 Tmem136Q3TYE7 245 aa6.71□□□□□ -1.34
Cdc40-201ENSMUST00000044166 A930003A15RikQ3U552 87 aa6.71□□□□□ -1.34
Cdc40-201ENSMUST00000044166 Olfr1419Q7TQS2 343 aa6.71□□□□□ -1.34
Cdc40-201ENSMUST00000044166 Olfr153Q7TR48 307 aa6.71□□□□□ -1.34
Cdc40-201ENSMUST00000044166 Fam168aQ8BGZ2 244 aa6.71□□□□□ -1.34
Cdc40-201ENSMUST00000044166 TdhQ8K3F7 373 aa6.71□□□□□ -1.34
Cdc40-201ENSMUST00000044166 Ap5s1Q9D742 170 aa6.71□□□□□ -1.34
Cdc40-201ENSMUST00000044166 Ighv6-7A0A0A6YWU3 119 aa6.7□□□□□ -1.34
Cdc40-201ENSMUST00000044166 P01787 123 aa6.7□□□□□ -1.34
Cdc40-201ENSMUST00000044166 CrygdP04342 174 aa6.7□□□□□ -1.34
Cdc40-201ENSMUST00000044166 Gng5Q80SZ7 68 aa6.7□□□□□ -1.34
Cdc40-201ENSMUST00000044166 Fam206aQ80ZQ9 193 aaKnown RBP6.7□□□□□ -1.34
Cdc40-201ENSMUST00000044166 Rbfox2Q8BP71 449 aaKnown RBP6.7□□□□□ -1.34
Cdc40-201ENSMUST00000044166 RetnQ99P87 114 aa6.7□□□□□ -1.34
Cdc40-201ENSMUST00000044166 Lamtor5Q9D1L9 91 aa6.7□□□□□ -1.34
Cdc40-201ENSMUST00000044166 Q9DAQ5 155 aa6.7□□□□□ -1.34
Cdc40-201ENSMUST00000044166 Apc2Q9Z1K7 2274 aa6.7□□□□□ -1.34
Cdc40-201ENSMUST00000044166 Rpl13a-ps1A0A140T8K2 203 aaKnown RBP6.7□□□□□ -1.34
Cdc40-201ENSMUST00000044166 Fgfbp1O70514 251 aa6.7□□□□□ -1.34
Cdc40-201ENSMUST00000044166 Rpl8P62918 257 aaKnown RBP6.7□□□□□ -1.34
Cdc40-201ENSMUST00000044166 Ube2l3P68037 154 aaKnown RBP6.7□□□□□ -1.34
Cdc40-201ENSMUST00000044166 Tmem52bQ0VBF2 186 aa6.7□□□□□ -1.34
Cdc40-201ENSMUST00000044166 Ssbp4Q3U4B1 363 aa6.7□□□□□ -1.34
Retrieved 100 of 22,080 RNA–protein pairs in 49.5 ms