Protein–RNA interactions for Protein: A0A0B4J1J4

Ighv9-2, Immunoglobulin heavy variable V9-2 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv9-2A0A0B4J1J4 Gm25239-201ENSMUST00000174915 86 ntBASIC30,77■■■□□ 2,52
Ighv9-2A0A0B4J1J4 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC28,64■■■□□ 2,18
Ighv9-2A0A0B4J1J4 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC28,22■■■□□ 2,11
Ighv9-2A0A0B4J1J4 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC27,95■■■□□ 2,06
Ighv9-2A0A0B4J1J4 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC27,93■■■□□ 2,06
Ighv9-2A0A0B4J1J4 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC27,74■■■□□ 2,03
Ighv9-2A0A0B4J1J4 Gm15042-201ENSMUST00000120212 883 ntBASIC27,36■■□□□ 1,97
Ighv9-2A0A0B4J1J4 Gm15045-201ENSMUST00000117359 883 ntBASIC26,8■■□□□ 1,88
Ighv9-2A0A0B4J1J4 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC26,74■■□□□ 1,87
Ighv9-2A0A0B4J1J4 Psd-208ENSMUST00000224556 2034 ntBASIC26,58■■□□□ 1,85
Ighv9-2A0A0B4J1J4 Gm24109-201ENSMUST00000175489 103 ntBASIC26,45■■□□□ 1,82
Ighv9-2A0A0B4J1J4 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC26,38■■□□□ 1,81
Ighv9-2A0A0B4J1J4 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC26,24■■□□□ 1,79
Ighv9-2A0A0B4J1J4 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC26,22■■□□□ 1,79
Ighv9-2A0A0B4J1J4 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC26,22■■□□□ 1,79
Ighv9-2A0A0B4J1J4 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC25,96■■□□□ 1,75
Ighv9-2A0A0B4J1J4 Gm23366-201ENSMUST00000175022 89 ntBASIC25,81■■□□□ 1,72
Ighv9-2A0A0B4J1J4 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC25,77■■□□□ 1,72
Ighv9-2A0A0B4J1J4 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC25,77■■□□□ 1,72
Ighv9-2A0A0B4J1J4 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC25,73■■□□□ 1,71
Ighv9-2A0A0B4J1J4 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC25,72■■□□□ 1,71
Ighv9-2A0A0B4J1J4 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC25,72■■□□□ 1,71
Ighv9-2A0A0B4J1J4 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC25,64■■□□□ 1,7
Ighv9-2A0A0B4J1J4 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC25,64■■□□□ 1,69
Ighv9-2A0A0B4J1J4 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC25,63■■□□□ 1,69
Ighv9-2A0A0B4J1J4 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC25,59■■□□□ 1,69
Ighv9-2A0A0B4J1J4 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC25,58■■□□□ 1,69
Ighv9-2A0A0B4J1J4 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC25,49■■□□□ 1,67
Ighv9-2A0A0B4J1J4 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC25,49■■□□□ 1,67
Ighv9-2A0A0B4J1J4 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC25,48■■□□□ 1,67
Ighv9-2A0A0B4J1J4 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC25,31■■□□□ 1,64
Ighv9-2A0A0B4J1J4 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC25,21■■□□□ 1,63
Ighv9-2A0A0B4J1J4 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC25,21■■□□□ 1,63
Ighv9-2A0A0B4J1J4 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC25,18■■□□□ 1,62
Ighv9-2A0A0B4J1J4 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC25,09■■□□□ 1,61
Ighv9-2A0A0B4J1J4 AC153911.1-202ENSMUST00000218534 1034 ntBASIC25,08■■□□□ 1,61
Ighv9-2A0A0B4J1J4 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1,59
Ighv9-2A0A0B4J1J4 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC24,97■■□□□ 1,59
Ighv9-2A0A0B4J1J4 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC24,9■■□□□ 1,58
Ighv9-2A0A0B4J1J4 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC24,85■■□□□ 1,57
Ighv9-2A0A0B4J1J4 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC24,76■■□□□ 1,55
Ighv9-2A0A0B4J1J4 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC24,62■■□□□ 1,53
Ighv9-2A0A0B4J1J4 Gm10524-201ENSMUST00000181931 1893 ntBASIC24,58■■□□□ 1,52
Ighv9-2A0A0B4J1J4 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC24,57■■□□□ 1,52
Ighv9-2A0A0B4J1J4 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC24,53■■□□□ 1,52
Ighv9-2A0A0B4J1J4 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC24,53■■□□□ 1,52
Ighv9-2A0A0B4J1J4 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC24,44■■□□□ 1,5
Ighv9-2A0A0B4J1J4 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC24,43■■□□□ 1,5
Ighv9-2A0A0B4J1J4 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC24,4■■□□□ 1,5
Ighv9-2A0A0B4J1J4 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC24,34■■□□□ 1,49
Ighv9-2A0A0B4J1J4 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC24,3■■□□□ 1,48
Ighv9-2A0A0B4J1J4 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC24,3■■□□□ 1,48
Ighv9-2A0A0B4J1J4 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC24,29■■□□□ 1,48
Ighv9-2A0A0B4J1J4 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC24,24■■□□□ 1,47
Ighv9-2A0A0B4J1J4 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC24,22■■□□□ 1,47
Ighv9-2A0A0B4J1J4 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC24,2■■□□□ 1,46
Ighv9-2A0A0B4J1J4 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC24,17■■□□□ 1,46
Ighv9-2A0A0B4J1J4 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC24,14■■□□□ 1,45
Ighv9-2A0A0B4J1J4 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC24,13■■□□□ 1,45
Ighv9-2A0A0B4J1J4 Gm25238-201ENSMUST00000174914 89 ntBASIC24,12■■□□□ 1,45
Ighv9-2A0A0B4J1J4 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC24,09■■□□□ 1,45
Ighv9-2A0A0B4J1J4 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC24,07■■□□□ 1,44
Ighv9-2A0A0B4J1J4 CT025624.2-201ENSMUST00000223609 1909 ntBASIC24,06■■□□□ 1,44
Ighv9-2A0A0B4J1J4 Gm27325-201ENSMUST00000175467 74 ntBASIC24,06■■□□□ 1,44
Ighv9-2A0A0B4J1J4 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC24,05■■□□□ 1,44
Ighv9-2A0A0B4J1J4 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC24,04■■□□□ 1,44
Ighv9-2A0A0B4J1J4 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC24,02■■□□□ 1,44
Ighv9-2A0A0B4J1J4 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC24,01■■□□□ 1,43
Ighv9-2A0A0B4J1J4 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC23,98■■□□□ 1,43
Ighv9-2A0A0B4J1J4 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC23,94■■□□□ 1,42
Ighv9-2A0A0B4J1J4 Gm42596-201ENSMUST00000196305 1958 ntBASIC23,93■■□□□ 1,42
Ighv9-2A0A0B4J1J4 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC23,89■■□□□ 1,41
Ighv9-2A0A0B4J1J4 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC23,85■■□□□ 1,41
Ighv9-2A0A0B4J1J4 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC23,77■■□□□ 1,4
Ighv9-2A0A0B4J1J4 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC23,75■■□□□ 1,39
Ighv9-2A0A0B4J1J4 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC23,67■■□□□ 1,38
Ighv9-2A0A0B4J1J4 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC23,61■■□□□ 1,37
Ighv9-2A0A0B4J1J4 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC23,59■■□□□ 1,37
Ighv9-2A0A0B4J1J4 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC23,58■■□□□ 1,36
Ighv9-2A0A0B4J1J4 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC23,57■■□□□ 1,36
Ighv9-2A0A0B4J1J4 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC23,56■■□□□ 1,36
Ighv9-2A0A0B4J1J4 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC23,56■■□□□ 1,36
Ighv9-2A0A0B4J1J4 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC23,54■■□□□ 1,36
Ighv9-2A0A0B4J1J4 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC23,53■■□□□ 1,36
Ighv9-2A0A0B4J1J4 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC23,53■■□□□ 1,36
Ighv9-2A0A0B4J1J4 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC23,51■■□□□ 1,35
Ighv9-2A0A0B4J1J4 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC23,46■■□□□ 1,35
Ighv9-2A0A0B4J1J4 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC23,43■■□□□ 1,34
Ighv9-2A0A0B4J1J4 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC23,43■■□□□ 1,34
Ighv9-2A0A0B4J1J4 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC23,42■■□□□ 1,34
Ighv9-2A0A0B4J1J4 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC23,41■■□□□ 1,34
Ighv9-2A0A0B4J1J4 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC23,41■■□□□ 1,34
Ighv9-2A0A0B4J1J4 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC23,39■■□□□ 1,33
Ighv9-2A0A0B4J1J4 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC23,38■■□□□ 1,33
Ighv9-2A0A0B4J1J4 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC23,37■■□□□ 1,33
Ighv9-2A0A0B4J1J4 Rab21-202ENSMUST00000218831 843 ntBASIC23,35■■□□□ 1,33
Ighv9-2A0A0B4J1J4 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC23,34■■□□□ 1,33
Ighv9-2A0A0B4J1J4 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC23,31■■□□□ 1,32
Ighv9-2A0A0B4J1J4 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC23,26■■□□□ 1,31
Ighv9-2A0A0B4J1J4 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC23,26■■□□□ 1,31
Retrieved 100 of 76,532 protein–RNA pairs in 30,9 ms