Protein–RNA interactions for Protein: P12246

Apcs, Serum amyloid P-component, mousemouse

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApcsP12246 Gm25239-201ENSMUST00000174915 86 ntBASIC28.08■■■□□ 2.09
ApcsP12246 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
ApcsP12246 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
ApcsP12246 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC26.64■■□□□ 1.86
ApcsP12246 Psd-208ENSMUST00000224556 2034 ntBASIC25.75■■□□□ 1.71
ApcsP12246 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
ApcsP12246 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
ApcsP12246 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
ApcsP12246 Gm15042-201ENSMUST00000120212 883 ntBASIC25.22■■□□□ 1.63
ApcsP12246 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
ApcsP12246 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
ApcsP12246 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
ApcsP12246 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
ApcsP12246 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC24.76■■□□□ 1.55
ApcsP12246 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
ApcsP12246 Gm15045-201ENSMUST00000117359 883 ntBASIC24.74■■□□□ 1.55
ApcsP12246 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
ApcsP12246 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
ApcsP12246 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
ApcsP12246 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
ApcsP12246 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
ApcsP12246 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
ApcsP12246 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
ApcsP12246 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
ApcsP12246 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.45
ApcsP12246 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC24.08■■□□□ 1.44
ApcsP12246 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
ApcsP12246 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC24.02■■□□□ 1.44
ApcsP12246 Gm24109-201ENSMUST00000175489 103 ntBASIC24.01■■□□□ 1.43
ApcsP12246 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
ApcsP12246 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
ApcsP12246 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC23.89■■□□□ 1.41
ApcsP12246 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
ApcsP12246 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
ApcsP12246 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
ApcsP12246 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
ApcsP12246 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC23.64■■□□□ 1.38
ApcsP12246 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
ApcsP12246 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC23.58■■□□□ 1.37
ApcsP12246 Gm23366-201ENSMUST00000175022 89 ntBASIC23.57■■□□□ 1.36
ApcsP12246 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC23.5■■□□□ 1.35
ApcsP12246 Gm10524-201ENSMUST00000181931 1893 ntBASIC23.49■■□□□ 1.35
ApcsP12246 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC23.45■■□□□ 1.34
ApcsP12246 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
ApcsP12246 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
ApcsP12246 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
ApcsP12246 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
ApcsP12246 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
ApcsP12246 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
ApcsP12246 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
ApcsP12246 AC153911.1-202ENSMUST00000218534 1034 ntBASIC23.15■■□□□ 1.3
ApcsP12246 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
ApcsP12246 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
ApcsP12246 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC23.05■■□□□ 1.28
ApcsP12246 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
ApcsP12246 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
ApcsP12246 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
ApcsP12246 CT025624.2-201ENSMUST00000223609 1909 ntBASIC22.86■■□□□ 1.25
ApcsP12246 Gm42596-201ENSMUST00000196305 1958 ntBASIC22.83■■□□□ 1.24
ApcsP12246 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC22.82■■□□□ 1.24
ApcsP12246 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
ApcsP12246 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC22.77■■□□□ 1.24
ApcsP12246 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC22.76■■□□□ 1.23
ApcsP12246 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC22.75■■□□□ 1.23
ApcsP12246 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
ApcsP12246 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
ApcsP12246 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
ApcsP12246 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
ApcsP12246 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
ApcsP12246 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
ApcsP12246 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
ApcsP12246 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
ApcsP12246 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
ApcsP12246 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
ApcsP12246 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC22.53■■□□□ 1.2
ApcsP12246 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
ApcsP12246 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
ApcsP12246 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
ApcsP12246 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC22.34■■□□□ 1.17
ApcsP12246 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
ApcsP12246 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
ApcsP12246 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
ApcsP12246 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
ApcsP12246 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
ApcsP12246 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
ApcsP12246 Gm27325-201ENSMUST00000175467 74 ntBASIC22.19■■□□□ 1.14
ApcsP12246 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
ApcsP12246 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
ApcsP12246 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
ApcsP12246 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
ApcsP12246 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC22.17■■□□□ 1.14
ApcsP12246 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
ApcsP12246 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
ApcsP12246 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
ApcsP12246 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC22.14■■□□□ 1.13
ApcsP12246 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
ApcsP12246 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
ApcsP12246 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
ApcsP12246 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
ApcsP12246 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms