RNA–Protein interactions for RNA: ENSMUST00000033158.5

Ubfd1-201, Transcript of Ubiquitin domain-containing protein UBFD1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubfd1, Length 4,849 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1-201ENSMUST00000033158 Rbfox3Q8BIF2 374 aa13.71□□□□□ -0.21
Ubfd1-201ENSMUST00000033158 Gm4894Q8CA09 118 aa13.71□□□□□ -0.21
Ubfd1-201ENSMUST00000033158 Slc17a9Q8VCL5 447 aa13.71□□□□□ -0.21
Ubfd1-201ENSMUST00000033158 Tmem126aQ9D8Y1 196 aa13.71□□□□□ -0.21
Ubfd1-201ENSMUST00000033158 Trav21-dv12A0A075B6C4 109 aa13.71□□□□□ -0.21
Ubfd1-201ENSMUST00000033158 Sdr39u1Q5M8N4 308 aa13.71□□□□□ -0.21
Ubfd1-201ENSMUST00000033158 Nat6Q9R123 314 aa13.71□□□□□ -0.21
Ubfd1-201ENSMUST00000033158 Gm20825J3QM67 227 aa13.71□□□□□ -0.21
Ubfd1-201ENSMUST00000033158 Ssty2Q149W4 227 aa13.71□□□□□ -0.21
Ubfd1-201ENSMUST00000033158 Lrcol1Q3URS3 161 aa13.71□□□□□ -0.21
Ubfd1-201ENSMUST00000033158 Gm20854Q62461 227 aa13.71□□□□□ -0.21
Ubfd1-201ENSMUST00000033158 Olfr523Q8VFE7 317 aa13.71□□□□□ -0.21
Ubfd1-201ENSMUST00000033158 Sh3bgrl3Q91VW3 93 aa13.71□□□□□ -0.21
Ubfd1-201ENSMUST00000033158 Olfr779E9PUS9 130 aa13.71□□□□□ -0.22
Ubfd1-201ENSMUST00000033158 Cpsf4lE9Q2N0 280 aa13.71□□□□□ -0.22
Ubfd1-201ENSMUST00000033158 Foxf2O54743 446 aa13.71□□□□□ -0.22
Ubfd1-201ENSMUST00000033158 Gm5150Q1AN92 299 aa13.71□□□□□ -0.22
Ubfd1-201ENSMUST00000033158 Slc25a15Q9WVD5 301 aa13.71□□□□□ -0.22
Ubfd1-201ENSMUST00000033158 Itgb4A2A863 1818 aa13.7□□□□□ -0.22
Ubfd1-201ENSMUST00000033158 Ube2d2bQ6ZWY6 147 aa13.7□□□□□ -0.22
Ubfd1-201ENSMUST00000033158 Prima1Q810F0 153 aa13.7□□□□□ -0.22
Ubfd1-201ENSMUST00000033158 QrfpQ8CE23 124 aa13.7□□□□□ -0.22
Ubfd1-201ENSMUST00000033158 Fbln5Q9WVH9 448 aa13.7□□□□□ -0.22
Ubfd1-201ENSMUST00000033158 Trdv2-1A0A0G2JGB9 116 aa13.7□□□□□ -0.22
Ubfd1-201ENSMUST00000033158 Znf474Q6V5K9 347 aa13.7□□□□□ -0.22
Ubfd1-201ENSMUST00000033158 Tm2d3Q8BJ83 261 aa13.7□□□□□ -0.22
Ubfd1-201ENSMUST00000033158 St6galnac6Q9JM95 333 aa13.7□□□□□ -0.22
Ubfd1-201ENSMUST00000033158 ThadaA8C756 1938 aa13.7□□□□□ -0.22
Ubfd1-201ENSMUST00000033158 Olfr322Q5NCC8 327 aa13.7□□□□□ -0.22
Ubfd1-201ENSMUST00000033158 Higd1bQ99JY6 98 aa13.7□□□□□ -0.22
Ubfd1-201ENSMUST00000033158 Necap2Q9D1J1 266 aa13.7□□□□□ -0.22
Ubfd1-201ENSMUST00000033158 Trav4-4-dv10A0A075B651 110 aa13.69□□□□□ -0.22
Ubfd1-201ENSMUST00000033158 Trav7-5A0A0G2JFX6 112 aa13.69□□□□□ -0.22
Ubfd1-201ENSMUST00000033158 AponG3X9D6 251 aa13.69□□□□□ -0.22
Ubfd1-201ENSMUST00000033158 Il3raP26952 396 aa13.69□□□□□ -0.22
Ubfd1-201ENSMUST00000033158 NmbQ9CR53 121 aa13.69□□□□□ -0.22
Ubfd1-201ENSMUST00000033158 Phlda3Q9WV95 125 aa13.69□□□□□ -0.22
Ubfd1-201ENSMUST00000033158 Zfp11P10751 647 aa13.69□□□□□ -0.22
Ubfd1-201ENSMUST00000033158 Oosp2Q4FZG8 168 aa13.69□□□□□ -0.22
Ubfd1-201ENSMUST00000033158 Snrnp40Q6PE01 358 aa13.69□□□□□ -0.22
Ubfd1-201ENSMUST00000033158 Tmem177Q8BPE4 311 aa13.69□□□□□ -0.22
Ubfd1-201ENSMUST00000033158 Atp23Q9CWQ3 201 aa13.69□□□□□ -0.22
Ubfd1-201ENSMUST00000033158 Scgb1b11A0A087WQJ0 93 aa13.69□□□□□ -0.22
Ubfd1-201ENSMUST00000033158 Gm13030A2APQ6 143 aa13.69□□□□□ -0.22
Ubfd1-201ENSMUST00000033158 P04946 108 aa13.69□□□□□ -0.22
Ubfd1-201ENSMUST00000033158 Zfp27P10077 819 aa13.69□□□□□ -0.22
Ubfd1-201ENSMUST00000033158 Timp3P39876 211 aa13.69□□□□□ -0.22
Ubfd1-201ENSMUST00000033158 C1ql4Q4ZJM9 238 aa13.69□□□□□ -0.22
Ubfd1-201ENSMUST00000033158 Pgpep1lQ9CWB5 130 aa13.69□□□□□ -0.22
Ubfd1-201ENSMUST00000033158 Cd5lQ9QWK4 352 aa13.69□□□□□ -0.22
Ubfd1-201ENSMUST00000033158 Col6a4A2AX52 2309 aa13.68□□□□□ -0.22
Ubfd1-201ENSMUST00000033158 Lcn2P11672 200 aa13.68□□□□□ -0.22
Ubfd1-201ENSMUST00000033158 Rnf126Q91YL2 313 aa13.68□□□□□ -0.22
Ubfd1-201ENSMUST00000033158 Prpf8Q99PV0 2335 aaKnown RBP13.68□□□□□ -0.22
Ubfd1-201ENSMUST00000033158 A0A1Y7VLU2 103 aa13.68□□□□□ -0.22
Ubfd1-201ENSMUST00000033158 Olfr810Q8VFH9 312 aa13.68□□□□□ -0.22
Ubfd1-201ENSMUST00000033158 Cox6cQ9CPQ1 76 aa13.68□□□□□ -0.22
Ubfd1-201ENSMUST00000033158 Frem1Q684R7 2191 aa13.68□□□□□ -0.22
Ubfd1-201ENSMUST00000033158 Tcrg-V4A0A0B4J1J8 138 aa13.68□□□□□ -0.22
Ubfd1-201ENSMUST00000033158 Efna4O08542 206 aa13.67□□□□□ -0.22
Ubfd1-201ENSMUST00000033158 Tmem241Q3UME2 297 aa13.67□□□□□ -0.22
Ubfd1-201ENSMUST00000033158 Rnf138Q9CQE0 245 aaKnown RBP13.67□□□□□ -0.22
Ubfd1-201ENSMUST00000033158 Dppa2Q9CWH0 301 aa13.67□□□□□ -0.22
Ubfd1-201ENSMUST00000033158 Dopey2Q3UHQ6 2295 aa13.67□□□□□ -0.22
Ubfd1-201ENSMUST00000033158 Lrrk1Q3UHC2 2014 aa13.67□□□□□ -0.22
Ubfd1-201ENSMUST00000033158 Gm20458E9PXJ7 78 aa13.67□□□□□ -0.22
Ubfd1-201ENSMUST00000033158 Gm17732E9Q5I2 61 aa13.67□□□□□ -0.22
Ubfd1-201ENSMUST00000033158 Cd59aO55186 123 aa13.67□□□□□ -0.22
Ubfd1-201ENSMUST00000033158 Iglc2P01844 104 aa13.67□□□□□ -0.22
Ubfd1-201ENSMUST00000033158 EpopQ7TNS8 369 aa13.67□□□□□ -0.22
Ubfd1-201ENSMUST00000033158 Rnf151Q9CQ29 239 aa13.67□□□□□ -0.22
Ubfd1-201ENSMUST00000033158 Olfr484Q8VFD3 321 aa13.67□□□□□ -0.22
Ubfd1-201ENSMUST00000033158 GrhprQ91Z53 328 aa13.67□□□□□ -0.22
Ubfd1-201ENSMUST00000033158 SonQ9QX47 2444 aaKnown RBP13.67□□□□□ -0.22
Ubfd1-201ENSMUST00000033158 Ighv1-22A0A075B5U7 117 aa13.67□□□□□ -0.22
Ubfd1-201ENSMUST00000033158 Arid2E9Q7E2 1828 aa13.67□□□□□ -0.22
Ubfd1-201ENSMUST00000033158 Thy1P01831 162 aa13.66□□□□□ -0.22
Ubfd1-201ENSMUST00000033158 UngP97931 306 aa13.66□□□□□ -0.22
Ubfd1-201ENSMUST00000033158 Derl1Q99J56 251 aa13.66□□□□□ -0.22
Ubfd1-201ENSMUST00000033158 Prss29Q99MS4 279 aa13.66□□□□□ -0.22
Ubfd1-201ENSMUST00000033158 Lypd8Q9D7S0 255 aa13.66□□□□□ -0.22
Ubfd1-201ENSMUST00000033158 Gbf1Q6DFZ1 1861 aa13.66□□□□□ -0.22
Ubfd1-201ENSMUST00000033158 NrepQ07475 68 aa13.66□□□□□ -0.22
Ubfd1-201ENSMUST00000033158 Timm21Q8CCM6 249 aa13.66□□□□□ -0.22
Ubfd1-201ENSMUST00000033158 Ighv1-36A0A0A6YXT2 117 aa13.66□□□□□ -0.22
Ubfd1-201ENSMUST00000033158 Ucp1P12242 307 aa13.66□□□□□ -0.22
Ubfd1-201ENSMUST00000033158 Reg1P43137 165 aa13.66□□□□□ -0.22
Ubfd1-201ENSMUST00000033158 Dock7Q8R1A4 2130 aaKnown RBP13.66□□□□□ -0.22
Ubfd1-201ENSMUST00000033158 Gm29644A0A087WPG2 191 aa13.66□□□□□ -0.22
Ubfd1-201ENSMUST00000033158 Ms4a12A0A087WSB9 263 aa13.66□□□□□ -0.22
Ubfd1-201ENSMUST00000033158 Gm36368A0A1D5RLK8 91 aa13.66□□□□□ -0.22
Ubfd1-201ENSMUST00000033158 Ss18Q62280 418 aa13.66□□□□□ -0.22
Ubfd1-201ENSMUST00000033158 Cdcp2Q8BQH6 427 aa13.66□□□□□ -0.22
Ubfd1-201ENSMUST00000033158 StrcQ8VIM6 1809 aa13.65□□□□□ -0.22
Ubfd1-201ENSMUST00000033158 Igkv6-23A0A140T8N5 115 aa13.65□□□□□ -0.22
Ubfd1-201ENSMUST00000033158 Igkv4-51A0N8I8 119 aa13.65□□□□□ -0.22
Ubfd1-201ENSMUST00000033158 Hist1h2bfP10853 126 aa13.65□□□□□ -0.22
Ubfd1-201ENSMUST00000033158 Hist1h2bbQ64475 126 aa13.65□□□□□ -0.22
Ubfd1-201ENSMUST00000033158 Hist1h2bkQ8CGP1 126 aaKnown RBP13.65□□□□□ -0.22
Ubfd1-201ENSMUST00000033158 Hist1h2bpQ8CGP2 126 aaKnown RBP13.65□□□□□ -0.22
Retrieved 100 of 22,080 RNA–protein pairs in 57.8 ms