Protein–RNA interactions for Protein: Q4ZJM9

C1ql4, Complement C1q-like protein 4, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1ql4Q4ZJM9 Gm25239-201ENSMUST00000174915 86 ntBASIC28.56■■■□□ 2.16
C1ql4Q4ZJM9 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
C1ql4Q4ZJM9 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
C1ql4Q4ZJM9 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
C1ql4Q4ZJM9 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
C1ql4Q4ZJM9 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
C1ql4Q4ZJM9 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC25.93■■□□□ 1.74
C1ql4Q4ZJM9 Psd-208ENSMUST00000224556 2034 ntBASIC25.69■■□□□ 1.7
C1ql4Q4ZJM9 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
C1ql4Q4ZJM9 Gm15042-201ENSMUST00000120212 883 ntBASIC25.25■■□□□ 1.63
C1ql4Q4ZJM9 Gm15045-201ENSMUST00000117359 883 ntBASIC24.67■■□□□ 1.54
C1ql4Q4ZJM9 Gm24109-201ENSMUST00000175489 103 ntBASIC24.6■■□□□ 1.53
C1ql4Q4ZJM9 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
C1ql4Q4ZJM9 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
C1ql4Q4ZJM9 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
C1ql4Q4ZJM9 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
C1ql4Q4ZJM9 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
C1ql4Q4ZJM9 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC24.35■■□□□ 1.49
C1ql4Q4ZJM9 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
C1ql4Q4ZJM9 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.46
C1ql4Q4ZJM9 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
C1ql4Q4ZJM9 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
C1ql4Q4ZJM9 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
C1ql4Q4ZJM9 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
C1ql4Q4ZJM9 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
C1ql4Q4ZJM9 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
C1ql4Q4ZJM9 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC24■■□□□ 1.43
C1ql4Q4ZJM9 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC24■■□□□ 1.43
C1ql4Q4ZJM9 Gm23366-201ENSMUST00000175022 89 ntBASIC23.94■■□□□ 1.42
C1ql4Q4ZJM9 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
C1ql4Q4ZJM9 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC23.79■■□□□ 1.4
C1ql4Q4ZJM9 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
C1ql4Q4ZJM9 Gm42596-201ENSMUST00000196305 1958 ntBASIC23.76■■□□□ 1.39
C1ql4Q4ZJM9 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
C1ql4Q4ZJM9 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
C1ql4Q4ZJM9 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
C1ql4Q4ZJM9 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
C1ql4Q4ZJM9 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
C1ql4Q4ZJM9 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
C1ql4Q4ZJM9 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
C1ql4Q4ZJM9 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
C1ql4Q4ZJM9 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
C1ql4Q4ZJM9 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC23.29■■□□□ 1.32
C1ql4Q4ZJM9 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
C1ql4Q4ZJM9 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
C1ql4Q4ZJM9 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC23.23■■□□□ 1.31
C1ql4Q4ZJM9 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
C1ql4Q4ZJM9 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC23.15■■□□□ 1.3
C1ql4Q4ZJM9 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC23.14■■□□□ 1.29
C1ql4Q4ZJM9 AC153911.1-202ENSMUST00000218534 1034 ntBASIC23.14■■□□□ 1.29
C1ql4Q4ZJM9 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
C1ql4Q4ZJM9 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC23.04■■□□□ 1.28
C1ql4Q4ZJM9 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
C1ql4Q4ZJM9 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC22.95■■□□□ 1.26
C1ql4Q4ZJM9 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC22.92■■□□□ 1.26
C1ql4Q4ZJM9 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
C1ql4Q4ZJM9 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
C1ql4Q4ZJM9 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC22.78■■□□□ 1.24
C1ql4Q4ZJM9 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC22.75■■□□□ 1.23
C1ql4Q4ZJM9 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC22.75■■□□□ 1.23
C1ql4Q4ZJM9 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
C1ql4Q4ZJM9 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
C1ql4Q4ZJM9 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
C1ql4Q4ZJM9 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC22.63■■□□□ 1.21
C1ql4Q4ZJM9 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
C1ql4Q4ZJM9 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
C1ql4Q4ZJM9 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
C1ql4Q4ZJM9 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC22.55■■□□□ 1.2
C1ql4Q4ZJM9 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
C1ql4Q4ZJM9 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
C1ql4Q4ZJM9 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC22.48■■□□□ 1.19
C1ql4Q4ZJM9 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
C1ql4Q4ZJM9 Gm10524-201ENSMUST00000181931 1893 ntBASIC22.45■■□□□ 1.18
C1ql4Q4ZJM9 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC22.45■■□□□ 1.18
C1ql4Q4ZJM9 Gm25238-201ENSMUST00000174914 89 ntBASIC22.43■■□□□ 1.18
C1ql4Q4ZJM9 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
C1ql4Q4ZJM9 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
C1ql4Q4ZJM9 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
C1ql4Q4ZJM9 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC22.4■■□□□ 1.18
C1ql4Q4ZJM9 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.18
C1ql4Q4ZJM9 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
C1ql4Q4ZJM9 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC22.37■■□□□ 1.17
C1ql4Q4ZJM9 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
C1ql4Q4ZJM9 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
C1ql4Q4ZJM9 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
C1ql4Q4ZJM9 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
C1ql4Q4ZJM9 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
C1ql4Q4ZJM9 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
C1ql4Q4ZJM9 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
C1ql4Q4ZJM9 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
C1ql4Q4ZJM9 Gm27325-201ENSMUST00000175467 74 ntBASIC22.13■■□□□ 1.13
C1ql4Q4ZJM9 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC22.12■■□□□ 1.13
C1ql4Q4ZJM9 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
C1ql4Q4ZJM9 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC22.1■■□□□ 1.13
C1ql4Q4ZJM9 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
C1ql4Q4ZJM9 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
C1ql4Q4ZJM9 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
C1ql4Q4ZJM9 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
C1ql4Q4ZJM9 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC21.99■■□□□ 1.11
C1ql4Q4ZJM9 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms