RNA–Protein interactions for RNA: ENSMUST00000115659.5

Pcdha9-201, Transcript of Protocadherin alpha-9, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdha9, Length 5,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9-201ENSMUST00000115659 Mzt1Q8BUR9 78 aa12.92□□□□□ -0.34
Pcdha9-201ENSMUST00000115659 Rnf126Q91YL2 313 aa12.92□□□□□ -0.34
Pcdha9-201ENSMUST00000115659 ChodlQ9CXM0 273 aa12.92□□□□□ -0.34
Pcdha9-201ENSMUST00000115659 Plxna1P70206 1894 aa12.92□□□□□ -0.34
Pcdha9-201ENSMUST00000115659 Gm12888Q3UW77 119 aa12.92□□□□□ -0.34
Pcdha9-201ENSMUST00000115659 TprF6ZDS4 2431 aaKnown RBP12.92□□□□□ -0.34
Pcdha9-201ENSMUST00000115659 Igsf23B2RTN2 239 aa12.92□□□□□ -0.34
Pcdha9-201ENSMUST00000115659 Q3UNZ8 350 aa12.92□□□□□ -0.34
Pcdha9-201ENSMUST00000115659 Tac4Q99N14 128 aa12.92□□□□□ -0.34
Pcdha9-201ENSMUST00000115659 Ighv7-2A0A0A6YX91 119 aa12.91□□□□□ -0.34
Pcdha9-201ENSMUST00000115659 1700067P10RikG3X8U2 183 aa12.91□□□□□ -0.34
Pcdha9-201ENSMUST00000115659 Lgals6O54891 301 aa12.91□□□□□ -0.34
Pcdha9-201ENSMUST00000115659 Cphx2Q8BX39 182 aa12.91□□□□□ -0.34
Pcdha9-201ENSMUST00000115659 Fer1l5P0DM40 2038 aa12.91□□□□□ -0.34
Pcdha9-201ENSMUST00000115659 Trbv19A0A0B4J1H4 117 aa12.91□□□□□ -0.34
Pcdha9-201ENSMUST00000115659 UngP97931 306 aa12.91□□□□□ -0.34
Pcdha9-201ENSMUST00000115659 Rnf125Q9D9R0 233 aa12.91□□□□□ -0.34
Pcdha9-201ENSMUST00000115659 Olfr484Q8VFD3 321 aa12.91□□□□□ -0.34
Pcdha9-201ENSMUST00000115659 QrfpQ8CE23 124 aa12.91□□□□□ -0.34
Pcdha9-201ENSMUST00000115659 Cited2O35740 269 aa12.9□□□□□ -0.34
Pcdha9-201ENSMUST00000115659 Dkk1O54908 272 aa12.9□□□□□ -0.34
Pcdha9-201ENSMUST00000115659 Znf474Q6V5K9 347 aa12.9□□□□□ -0.34
Pcdha9-201ENSMUST00000115659 Opn3Q9WUK7 400 aa12.9□□□□□ -0.34
Pcdha9-201ENSMUST00000115659 Umad1E0CX23 159 aa12.9□□□□□ -0.34
Pcdha9-201ENSMUST00000115659 Gm17732E9Q5I2 61 aa12.9□□□□□ -0.34
Pcdha9-201ENSMUST00000115659 P18532 116 aa12.9□□□□□ -0.34
Pcdha9-201ENSMUST00000115659 Tnfrsf9P20334 256 aa12.9□□□□□ -0.34
Pcdha9-201ENSMUST00000115659 Cacng7P62956 275 aa12.9□□□□□ -0.34
Pcdha9-201ENSMUST00000115659 Col9a1Q05722 921 aa12.9□□□□□ -0.34
Pcdha9-201ENSMUST00000115659 Gm4792Q569Q2 183 aa12.9□□□□□ -0.34
Pcdha9-201ENSMUST00000115659 Phlda3Q9WV95 125 aa12.9□□□□□ -0.34
Pcdha9-201ENSMUST00000115659 Gng5Q80SZ7 68 aa12.9□□□□□ -0.34
Pcdha9-201ENSMUST00000115659 Gbf1Q6DFZ1 1861 aa12.9□□□□□ -0.34
Pcdha9-201ENSMUST00000115659 Igkv4-91A0A075B5L2 119 aa12.9□□□□□ -0.34
Pcdha9-201ENSMUST00000115659 Ighv5-9A0A075B5Q2 117 aa12.9□□□□□ -0.34
Pcdha9-201ENSMUST00000115659 Shisal1Q0VBP7 198 aa12.9□□□□□ -0.34
Pcdha9-201ENSMUST00000115659 Asphd1Q2TA57 360 aa12.9□□□□□ -0.34
Pcdha9-201ENSMUST00000115659 PcolceQ61398 468 aa12.9□□□□□ -0.34
Pcdha9-201ENSMUST00000115659 Foxs1Q61574 329 aa12.9□□□□□ -0.34
Pcdha9-201ENSMUST00000115659 St6galnac6Q9JM95 333 aa12.9□□□□□ -0.34
Pcdha9-201ENSMUST00000115659 Prima1Q810F0 153 aa12.89□□□□□ -0.35
Pcdha9-201ENSMUST00000115659 Gm4894Q8CA09 118 aa12.89□□□□□ -0.35
Pcdha9-201ENSMUST00000115659 Trav7n-4A0A075B620 113 aa12.89□□□□□ -0.35
Pcdha9-201ENSMUST00000115659 Ighv1-37A0A0A6YW32 117 aa12.89□□□□□ -0.35
Pcdha9-201ENSMUST00000115659 Tmem136Q3TYE7 245 aa12.89□□□□□ -0.35
Pcdha9-201ENSMUST00000115659 AgerQ62151 402 aa12.89□□□□□ -0.35
Pcdha9-201ENSMUST00000115659 Srsf1Q6PDM2 248 aaKnown RBP12.89□□□□□ -0.35
Pcdha9-201ENSMUST00000115659 Gm29644A0A087WPG2 191 aa12.88□□□□□ -0.35
Pcdha9-201ENSMUST00000115659 D130052B06RikQ3UW13 202 aa12.88□□□□□ -0.35
Pcdha9-201ENSMUST00000115659 RetnQ99P87 114 aa12.88□□□□□ -0.35
Pcdha9-201ENSMUST00000115659 Trav7-5A0A0G2JFX6 112 aa12.88□□□□□ -0.35
Pcdha9-201ENSMUST00000115659 P01723 117 aa12.88□□□□□ -0.35
Pcdha9-201ENSMUST00000115659 AdmP97297 184 aa12.88□□□□□ -0.35
Pcdha9-201ENSMUST00000115659 Cela3bQ9CQ52 269 aa12.88□□□□□ -0.35
Pcdha9-201ENSMUST00000115659 4930544G11RikQ9CR99 193 aa12.88□□□□□ -0.35
Pcdha9-201ENSMUST00000115659 Sec11aQ9R0P6 179 aa12.88□□□□□ -0.35
Pcdha9-201ENSMUST00000115659 Vamp8O70404 101 aa12.88□□□□□ -0.35
Pcdha9-201ENSMUST00000115659 LtbP41155 306 aa12.88□□□□□ -0.35
Pcdha9-201ENSMUST00000115659 Neurog3P70661 214 aa12.88□□□□□ -0.35
Pcdha9-201ENSMUST00000115659 Tmem88bQ3TYP4 173 aa12.88□□□□□ -0.35
Pcdha9-201ENSMUST00000115659 Olfr498Q8VEW2 330 aa12.88□□□□□ -0.35
Pcdha9-201ENSMUST00000115659 Mcrip2Q9CQB2 160 aaKnown RBP12.88□□□□□ -0.35
Pcdha9-201ENSMUST00000115659 Reg4Q9D8G5 157 aa12.88□□□□□ -0.35
Pcdha9-201ENSMUST00000115659 Pmaip1Q9JM54 103 aa12.88□□□□□ -0.35
Pcdha9-201ENSMUST00000115659 Ccl3P10855 92 aa12.88□□□□□ -0.35
Pcdha9-201ENSMUST00000115659 Ormdl2Q9CQZ0 153 aa12.88□□□□□ -0.35
Pcdha9-201ENSMUST00000115659 Iglc2P01844 104 aa12.87□□□□□ -0.35
Pcdha9-201ENSMUST00000115659 Tcl1b2P56841 117 aa12.87□□□□□ -0.35
Pcdha9-201ENSMUST00000115659 Defb33Q30KN3 62 aa12.87□□□□□ -0.35
Pcdha9-201ENSMUST00000115659 Vmn1r216Q8R257 298 aa12.87□□□□□ -0.35
Pcdha9-201ENSMUST00000115659 Znf22Q9ERU3 237 aa12.87□□□□□ -0.35
Pcdha9-201ENSMUST00000115659 Mmp23O88676 391 aa12.87□□□□□ -0.35
Pcdha9-201ENSMUST00000115659 Tmem129Q8K304 362 aa12.87□□□□□ -0.35
Pcdha9-201ENSMUST00000115659 Ralgapa1Q6GYP7 2035 aa12.87□□□□□ -0.35
Pcdha9-201ENSMUST00000115659 Zfp11P10751 647 aa12.87□□□□□ -0.35
Pcdha9-201ENSMUST00000115659 Hspe1Q64433 102 aaKnown RBP12.87□□□□□ -0.35
Pcdha9-201ENSMUST00000115659 H2al2bA9Z055 111 aa12.86□□□□□ -0.35
Pcdha9-201ENSMUST00000115659 Rbfox3Q8BIF2 374 aa12.86□□□□□ -0.35
Pcdha9-201ENSMUST00000115659 Saxo2Q8BQB6 394 aa12.86□□□□□ -0.35
Pcdha9-201ENSMUST00000115659 Nat6Q9R123 314 aa12.86□□□□□ -0.35
Pcdha9-201ENSMUST00000115659 Hs3st6Q5GFD5 342 aa12.86□□□□□ -0.35
Pcdha9-201ENSMUST00000115659 BC106179Q8C9L1 186 aa12.86□□□□□ -0.35
Pcdha9-201ENSMUST00000115659 Olfr33Q8VGX7 318 aa12.86□□□□□ -0.35
Pcdha9-201ENSMUST00000115659 P01655 112 aa12.86□□□□□ -0.35
Pcdha9-201ENSMUST00000115659 Znf146Q8BQN6 292 aa12.86□□□□□ -0.35
Pcdha9-201ENSMUST00000115659 V1ra8Q9EQ48 279 aa12.86□□□□□ -0.35
Pcdha9-201ENSMUST00000115659 LenepQ9WVB6 61 aa12.86□□□□□ -0.35
Pcdha9-201ENSMUST00000115659 Gpr179E9PY61 2293 aa12.86□□□□□ -0.35
Pcdha9-201ENSMUST00000115659 Efna4O08542 206 aa12.86□□□□□ -0.35
Pcdha9-201ENSMUST00000115659 Saa3P04918 122 aa12.86□□□□□ -0.35
Pcdha9-201ENSMUST00000115659 Dkk2Q9QYZ8 259 aa12.86□□□□□ -0.35
Pcdha9-201ENSMUST00000115659 Loxhd1C8YR32 2068 aa12.86□□□□□ -0.35
Pcdha9-201ENSMUST00000115659 Sod1P08228 154 aaKnown RBP12.86□□□□□ -0.35
Pcdha9-201ENSMUST00000115659 Klk7Q91VE3 249 aa12.86□□□□□ -0.35
Pcdha9-201ENSMUST00000115659 Sh3bgrl3Q91VW3 93 aa12.86□□□□□ -0.35
Pcdha9-201ENSMUST00000115659 Il3raP26952 396 aa12.85□□□□□ -0.35
Pcdha9-201ENSMUST00000115659 Olfr1199Q8VF94 310 aa12.85□□□□□ -0.35
Pcdha9-201ENSMUST00000115659 Gsx1P31315 261 aa12.85□□□□□ -0.35
Pcdha9-201ENSMUST00000115659 Gm13030A2APQ6 143 aa12.85□□□□□ -0.35
Pcdha9-201ENSMUST00000115659 Zfp27P10077 819 aa12.85□□□□□ -0.35
Retrieved 100 of 22,080 RNA–protein pairs in 29 ms