RNA–Protein interactions for RNA: YPR066W

UBA3, Transcript of Protein that activates Rub1p (NEDD8) before neddylation, yeast

Gene UBA3, Length 900 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBA3	YPR066W	MTC7	P32633	139 aa		5.88	□□□□□ -1.47
UBA3	YPR066W	APT2	P36973	181 aa		5.88	□□□□□ -1.47
UBA3	YPR066W	YHR033W	P38690	423 aa		5.88	□□□□□ -1.47
UBA3	YPR066W	VID27	P40157	782 aa		5.88	□□□□□ -1.47
UBA3	YPR066W	SAP185	P40856	1058 aa		5.88	□□□□□ -1.47
UBA3	YPR066W	FKH2	P41813	862 aa		5.88	□□□□□ -1.47
UBA3	YPR066W	PXA1	P41909	870 aa		5.88	□□□□□ -1.47
UBA3	YPR066W	BIT61	P47041	543 aa		5.88	□□□□□ -1.47
UBA3	YPR066W	VPS4	P52917	437 aa		5.88	□□□□□ -1.47
UBA3	YPR066W	CSI1	Q04368	295 aa		5.88	□□□□□ -1.47
UBA3	YPR066W	LAS17	Q12446	633 aa		5.88	□□□□□ -1.47
UBA3	YPR066W	ECM3	Q99252	613 aa		5.88	□□□□□ -1.47
UBA3	YPR066W	SAC3	P46674	1301 aa		5.88	□□□□□ -1.47
UBA3	YPR066W	SOD2	P00447	233 aa		5.87	□□□□□ -1.47
UBA3	YPR066W	RPP0	P05317	312 aa	Known RBP	5.87	□□□□□ -1.47
UBA3	YPR066W	MSM1	P22438	575 aa		5.87	□□□□□ -1.47
UBA3	YPR066W	LST4	P34239	828 aa		5.87	□□□□□ -1.47
UBA3	YPR066W	AIM3	P38266	947 aa	Known RBP	5.87	□□□□□ -1.47
UBA3	YPR066W	LYS9	P38999	446 aa		5.87	□□□□□ -1.47
UBA3	YPR066W	GET2	P40056	285 aa		5.87	□□□□□ -1.47
UBA3	YPR066W	MAD3	P47074	515 aa		5.87	□□□□□ -1.47
UBA3	YPR066W	MNT2	P53059	558 aa		5.87	□□□□□ -1.47
UBA3	YPR066W	YML131W	Q03102	365 aa		5.87	□□□□□ -1.47
UBA3	YPR066W	VBA4	Q04602	768 aa	Known RBP	5.87	□□□□□ -1.47
UBA3	YPR066W	GAD1	Q04792	585 aa		5.87	□□□□□ -1.47
UBA3	YPR066W	CDA2	Q06703	312 aa		5.87	□□□□□ -1.47
UBA3	YPR066W	THI3	Q07471	609 aa		5.87	□□□□□ -1.47
UBA3	YPR066W	DUR1,2	P32528	1835 aa	Known RBP	5.87	□□□□□ -1.47
UBA3	YPR066W	VAS1	P07806	1104 aa	Known RBP	5.86	□□□□□ -1.47
UBA3	YPR066W	SEG2	P34250	1132 aa		5.86	□□□□□ -1.47
UBA3	YPR066W	RMA1	P36001	430 aa	Known RBP	5.86	□□□□□ -1.47
UBA3	YPR066W	SWD1	P39706	426 aa		5.86	□□□□□ -1.47
UBA3	YPR066W	SPC72	P39723	622 aa		5.86	□□□□□ -1.47
UBA3	YPR066W	VPS27	P40343	622 aa	Known RBP	5.86	□□□□□ -1.47
UBA3	YPR066W	IMA5	P40884	581 aa		5.86	□□□□□ -1.47
UBA3	YPR066W	MTL1	P53214	551 aa		5.86	□□□□□ -1.47
UBA3	YPR066W	VPS5	Q92331	675 aa		5.86	□□□□□ -1.47
UBA3	YPR066W	ERG20	P08524	352 aa	Known RBP	5.85	□□□□□ -1.47
UBA3	YPR066W	CBP3	P21560	335 aa		5.85	□□□□□ -1.47
UBA3	YPR066W	PRE4	P30657	266 aa		5.85	□□□□□ -1.47
UBA3	YPR066W	PRS1	P32895	427 aa	Known RBP	5.85	□□□□□ -1.47
UBA3	YPR066W	SHM2	P37291	469 aa	Known RBP	5.85	□□□□□ -1.47
UBA3	YPR066W	APM3	P38153	483 aa		5.85	□□□□□ -1.47
UBA3	YPR066W	CDS1	P38221	457 aa		5.85	□□□□□ -1.47
UBA3	YPR066W	SSP120	P39931	234 aa	Known RBP	5.85	□□□□□ -1.47
UBA3	YPR066W	PRM2	P40534	656 aa		5.85	□□□□□ -1.47
UBA3	YPR066W	PEF1	P53238	335 aa		5.85	□□□□□ -1.47
UBA3	YPR066W	YGR117C	P53270	476 aa		5.85	□□□□□ -1.47
UBA3	YPR066W	NRD1	P53617	575 aa	Known RBP RIP-Chip data	5.85	□□□□□ -1.47	not detected
UBA3	YPR066W	YNR071C	P53757	342 aa		5.85	□□□□□ -1.47
UBA3	YPR066W	IRC4	Q03036	179 aa		5.85	□□□□□ -1.47
UBA3	YPR066W	RGC1	Q06108	1083 aa	Known RBP	5.85	□□□□□ -1.47
UBA3	YPR066W	MCH5	Q08777	521 aa		5.85	□□□□□ -1.47
UBA3	YPR066W	DBP10	Q12389	995 aa	Known RBP	5.85	□□□□□ -1.47
UBA3	YPR066W	RPS19A	P07280	144 aa	Known RBP	5.84	□□□□□ -1.47
UBA3	YPR066W	RPS19B	P07281	144 aa	Predicted RBP	5.84	□□□□□ -1.47
UBA3	YPR066W	YIL089W	P40500	205 aa		5.84	□□□□□ -1.47
UBA3	YPR066W	GSM1	P42950	618 aa		5.84	□□□□□ -1.47
UBA3	YPR066W	TRM44	Q02648	567 aa	Known RBP	5.84	□□□□□ -1.47
UBA3	YPR066W	PPN1	Q04119	674 aa		5.84	□□□□□ -1.47
UBA3	YPR066W	TMA64	Q04600	565 aa	Known RBP	5.84	□□□□□ -1.47
UBA3	YPR066W	ENB1	Q08299	606 aa		5.84	□□□□□ -1.47
UBA3	YPR066W	POM34	Q12445	299 aa		5.84	□□□□□ -1.47
UBA3	YPR066W	GAS1	P22146	559 aa	Known RBP	5.83	□□□□□ -1.48
UBA3	YPR066W	PEX1	P24004	1043 aa		5.83	□□□□□ -1.48
UBA3	YPR066W	CWH43	P25618	953 aa		5.83	□□□□□ -1.48
UBA3	YPR066W	SSH4	P32343	579 aa		5.83	□□□□□ -1.48
UBA3	YPR066W	BEM3	P32873	1128 aa		5.83	□□□□□ -1.48
UBA3	YPR066W	KTR3	P38130	404 aa	Predicted RBP	5.83	□□□□□ -1.48
UBA3	YPR066W	BAP3	P41815	604 aa		5.83	□□□□□ -1.48
UBA3	YPR066W	RIM8	P53179	542 aa		5.83	□□□□□ -1.48
UBA3	YPR066W	TRS130	Q03660	1102 aa		5.83	□□□□□ -1.48
UBA3	YPR066W	CTK1	Q03957	528 aa	Known RBP	5.83	□□□□□ -1.48
UBA3	YPR066W	TMA10	Q06177	86 aa		5.83	□□□□□ -1.48
UBA3	YPR066W	ATG11	Q12527	1178 aa		5.83	□□□□□ -1.48
UBA3	YPR066W	URA3	P03962	267 aa		5.82	□□□□□ -1.48
UBA3	YPR066W	RPS9B	P05755	195 aa	Known RBP	5.82	□□□□□ -1.48
UBA3	YPR066W	HMG2	P12684	1045 aa		5.82	□□□□□ -1.48
UBA3	YPR066W	GFA1	P14742	717 aa	Known RBP	5.82	□□□□□ -1.48
UBA3	YPR066W	DAL5	P15365	543 aa		5.82	□□□□□ -1.48
UBA3	YPR066W	PRP22	P24384	1145 aa	Known RBP	5.82	□□□□□ -1.48
UBA3	YPR066W	KIN82	P25341	720 aa		5.82	□□□□□ -1.48
UBA3	YPR066W	RPT3	P33298	428 aa	Known RBP	5.82	□□□□□ -1.48
UBA3	YPR066W	FUN12	P39730	1002 aa	Known RBP	5.82	□□□□□ -1.48
UBA3	YPR066W	HOS4	P40480	1083 aa		5.82	□□□□□ -1.48
UBA3	YPR066W	YDL183C	P48569	320 aa		5.82	□□□□□ -1.48
UBA3	YPR066W	MUP1	P50276	574 aa		5.82	□□□□□ -1.48
UBA3	YPR066W	SPO1	P53541	631 aa		5.82	□□□□□ -1.48
UBA3	YPR066W	TIM50	Q02776	476 aa		5.82	□□□□□ -1.48
UBA3	YPR066W	CDC45	Q08032	650 aa		5.82	□□□□□ -1.48
UBA3	YPR066W	DIA2	Q08496	732 aa	Predicted RBP	5.82	□□□□□ -1.48
UBA3	YPR066W	LAT1	P12695	482 aa	Known RBP	5.81	□□□□□ -1.48
UBA3	YPR066W	HPR1	P17629	752 aa	Known RBP	5.81	□□□□□ -1.48
UBA3	YPR066W	PRE10	P21242	288 aa	Known RBP RIP-Chip data	5.81	□□□□□ -1.48	not detected
UBA3	YPR066W	RPS7A	P26786	190 aa	Known RBP	5.81	□□□□□ -1.48
UBA3	YPR066W	TOD6	P34219	525 aa		5.81	□□□□□ -1.48
UBA3	YPR066W	CRG1	P38892	291 aa	RIP-Chip data	5.81	□□□□□ -1.48	not detected
UBA3	YPR066W	YIR042C	P40586	236 aa		5.81	□□□□□ -1.48
UBA3	YPR066W	GTR1	Q00582	310 aa		5.81	□□□□□ -1.48
UBA3	YPR066W	TRI1	Q05024	226 aa		5.81	□□□□□ -1.48

Retrieved 100 of 5,963 RNA–protein pairs in 46.2 ms