RNA–Protein interactions for RNA: YPL045W

VPS16, Transcript of Subunit of the HOPS and the CORVET complexes, yeastyeast

Gene VPS16, Length 2,397 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS16YPL045W SLN1P39928 1220 aaPredicted RBP2.54□□□□□ -2
VPS16YPL045W VFA1P40080 203 aa2.54□□□□□ -2
VPS16YPL045W LSM5P40089 93 aaKnown RBP2.54□□□□□ -2
VPS16YPL045W YJR061WP40355 935 aa2.54□□□□□ -2
VPS16YPL045W AXL1P40851 1208 aa2.54□□□□□ -2
VPS16YPL045W TEL2P53038 688 aa2.54□□□□□ -2
VPS16YPL045W COG1P53079 417 aa2.54□□□□□ -2
VPS16YPL045W SLU7Q02775 382 aaKnown RBP2.54□□□□□ -2
VPS16YPL045W ERO1Q03103 563 aa2.54□□□□□ -2
VPS16YPL045W PLB2Q03674 706 aa2.54□□□□□ -2
VPS16YPL045W RCF1Q03713 159 aa2.54□□□□□ -2
VPS16YPL045W AIM6Q07716 390 aa2.54□□□□□ -2
VPS16YPL045W SUL2Q12325 893 aa2.54□□□□□ -2
VPS16YPL045W SKM1Q12469 655 aa2.54□□□□□ -2
VPS16YPL045W HRP1Q99383 534 aaKnown RBP2.54□□□□□ -2
VPS16YPL045W RPS9BP05755 195 aaKnown RBP2.53□□□□□ -2
VPS16YPL045W MET17P06106 444 aa2.53□□□□□ -2
VPS16YPL045W HIS5P07172 385 aa2.53□□□□□ -2
VPS16YPL045W SUI3P09064 285 aaKnown RBP2.53□□□□□ -2
VPS16YPL045W RED1P14291 827 aa2.53□□□□□ -2
VPS16YPL045W KIN82P25341 720 aa2.53□□□□□ -2
VPS16YPL045W RPC53P25441 422 aa2.53□□□□□ -2
VPS16YPL045W GAR1P28007 205 aaKnown RBP2.53□□□□□ -2
VPS16YPL045W ERG3P32353 365 aa2.53□□□□□ -2
VPS16YPL045W EHT1P38295 451 aa2.53□□□□□ -2
VPS16YPL045W STB5P38699 743 aa2.53□□□□□ -2
VPS16YPL045W RPP1P38786 293 aa2.53□□□□□ -2
VPS16YPL045W FMP10P40098 244 aa2.53□□□□□ -2
VPS16YPL045W CHA4P43634 648 aa2.53□□□□□ -2
VPS16YPL045W FOL2P51601 243 aaKnown RBP2.53□□□□□ -2
VPS16YPL045W YML6P51998 286 aa2.53□□□□□ -2
VPS16YPL045W DUO1P53168 247 aaKnown RBP2.53□□□□□ -2
VPS16YPL045W YGR035CP53222 116 aa2.53□□□□□ -2
VPS16YPL045W MRPS35P53292 345 aa2.53□□□□□ -2
VPS16YPL045W YSA1Q01976 231 aa2.53□□□□□ -2
VPS16YPL045W MEH1Q02205 184 aa2.53□□□□□ -2
VPS16YPL045W TRS31Q03337 283 aa2.53□□□□□ -2
VPS16YPL045W YMR155WQ03795 547 aa2.53□□□□□ -2
VPS16YPL045W VPS64Q03944 604 aa2.53□□□□□ -2
VPS16YPL045W THI72Q08579 599 aa2.53□□□□□ -2
VPS16YPL045W YDR215CQ12240 137 aa2.53□□□□□ -2
VPS16YPL045W RKR1Q04781 1562 aa2.53□□□□□ -2
VPS16YPL045W CDC25P04821 1589 aa2.53□□□□□ -2
VPS16YPL045W UFD4P33202 1483 aa2.53□□□□□ -2
VPS16YPL045W YLR302CO13544 120 aa2.53□□□□□ -2
VPS16YPL045W TUB2P02557 457 aaKnown RBP2.53□□□□□ -2
VPS16YPL045W TUF1P02992 437 aaKnown RBP2.53□□□□□ -2
VPS16YPL045W GCN4P03069 281 aa2.53□□□□□ -2
VPS16YPL045W RPB2P08518 1224 aaKnown RBP2.53□□□□□ -2
VPS16YPL045W YCK2P23292 546 aaKnown RBP2.53□□□□□ -2
VPS16YPL045W CDC60P26637 1090 aaKnown RBP2.53□□□□□ -2
VPS16YPL045W RPS7AP26786 190 aaKnown RBP2.53□□□□□ -2
VPS16YPL045W PRP45P28004 379 aaPredicted RBP2.53□□□□□ -2
VPS16YPL045W MRP20P32387 263 aa2.53□□□□□ -2
VPS16YPL045W VPH1P32563 840 aaKnown RBP2.53□□□□□ -2
VPS16YPL045W GET2P40056 285 aa2.53□□□□□ -2
VPS16YPL045W IST3P40565 148 aaPredicted RBP2.53□□□□□ -2
VPS16YPL045W ARF3P40994 183 aaRIP-Chip data2.53□□□□□ -2not detected
VPS16YPL045W CIR1P42940 261 aa2.53□□□□□ -2
VPS16YPL045W TEX1P53851 422 aaKnown RBP2.53□□□□□ -2
VPS16YPL045W ORC3P54790 616 aa2.53□□□□□ -2
VPS16YPL045W SSL2Q00578 843 aa2.53□□□□□ -2
VPS16YPL045W FCP1Q03254 732 aa2.53□□□□□ -2
VPS16YPL045W ROT1Q03691 256 aa2.53□□□□□ -2
VPS16YPL045W PEX19Q07418 342 aa2.53□□□□□ -2
VPS16YPL045W SMC6Q12749 1114 aa2.53□□□□□ -2
VPS16YPL045W POL1P13382 1468 aa2.52□□□□□ -2.01
VPS16YPL045W ARG3P05150 338 aa2.52□□□□□ -2.01
VPS16YPL045W TY2A-LR1P0C2J4 438 aa2.52□□□□□ -2.01
VPS16YPL045W TY2A-FP0CX61 438 aa2.52□□□□□ -2.01
VPS16YPL045W TY2A-GR2P0CX62 438 aa2.52□□□□□ -2.01
VPS16YPL045W CDC24P11433 854 aaPredicted RBP2.52□□□□□ -2.01
VPS16YPL045W TUP1P16649 713 aa2.52□□□□□ -2.01
VPS16YPL045W ROX1P25042 368 aa2.52□□□□□ -2.01
VPS16YPL045W TY2A-CP25383 438 aa2.52□□□□□ -2.01
VPS16YPL045W TOS1P38288 455 aa2.52□□□□□ -2.01
VPS16YPL045W LRP1P38801 184 aaKnown RBP2.52□□□□□ -2.01
VPS16YPL045W PSD1P39006 500 aa2.52□□□□□ -2.01
VPS16YPL045W ARC1P46672 376 aaKnown RBP2.52□□□□□ -2.01
VPS16YPL045W SPO1P53541 631 aa2.52□□□□□ -2.01
VPS16YPL045W VPS75P53853 264 aa2.52□□□□□ -2.01
VPS16YPL045W CSL4P53859 292 aaPredicted RBP2.52□□□□□ -2.01
VPS16YPL045W TY2A-DR2Q03483 438 aa2.52□□□□□ -2.01
VPS16YPL045W GAD1Q04792 585 aa2.52□□□□□ -2.01
VPS16YPL045W VAM6Q07468 1049 aa2.52□□□□□ -2.01
VPS16YPL045W CIR2Q08822 631 aa2.52□□□□□ -2.01
VPS16YPL045W AIM41Q12032 185 aa2.52□□□□□ -2.01
VPS16YPL045W HMI1Q12039 706 aa2.52□□□□□ -2.01
VPS16YPL045W TGL5Q12043 749 aa2.52□□□□□ -2.01
VPS16YPL045W HUA2Q12134 243 aa2.52□□□□□ -2.01
VPS16YPL045W NBP2Q12163 236 aa2.52□□□□□ -2.01
VPS16YPL045W TY2A-BQ12260 438 aa2.52□□□□□ -2.01
VPS16YPL045W TY2A-OR2Q12293 438 aa2.52□□□□□ -2.01
VPS16YPL045W YLR122CQ12312 125 aa2.52□□□□□ -2.01
VPS16YPL045W TY2A-DR1Q12392 438 aa2.52□□□□□ -2.01
VPS16YPL045W TY2A-OR1Q12439 438 aa2.52□□□□□ -2.01
VPS16YPL045W YOR111WQ99210 232 aa2.52□□□□□ -2.01
VPS16YPL045W TY2A-DR3Q99303 438 aa2.52□□□□□ -2.01
VPS16YPL045W RPP2AP05319 106 aaKnown RBP2.52□□□□□ -2.01
VPS16YPL045W CDC6P09119 513 aa2.52□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 46.9 ms