RNA–Protein interactions for RNA: YNR046W

TRM112, Transcript of Protein involved in methylation of tRNA, rRNA, and translation factors, yeast

Gene TRM112, Length 408 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRM112	YNR046W	IMA1	P53051	589 aa		4.17	□□□□□ -1.74
TRM112	YNR046W	ARC35	P53731	342 aa	Known RBP	4.17	□□□□□ -1.74
TRM112	YNR046W	DAK1	P54838	584 aa	Known RBP	4.17	□□□□□ -1.74
TRM112	YNR046W	YPL108W	Q02872	168 aa	Predicted RBP	4.17	□□□□□ -1.74
TRM112	YNR046W	EFR3	Q03653	782 aa	Known RBP	4.17	□□□□□ -1.74
TRM112	YNR046W	ESC8	Q08119	714 aa		4.17	□□□□□ -1.74
TRM112	YNR046W	USV1	Q12132	391 aa		4.17	□□□□□ -1.74
TRM112	YNR046W	BIK1	P11709	440 aa		4.16	□□□□□ -1.74
TRM112	YNR046W	RAD16	P31244	790 aa		4.16	□□□□□ -1.74
TRM112	YNR046W	ELF1	P36053	145 aa		4.16	□□□□□ -1.74
TRM112	YNR046W	MRPL7	P36519	292 aa		4.16	□□□□□ -1.74
TRM112	YNR046W	YHR097C	P38809	366 aa	Known RBP	4.16	□□□□□ -1.74
TRM112	YNR046W	SAP4	P53036	818 aa		4.16	□□□□□ -1.74
TRM112	YNR046W	COS12	P53053	380 aa		4.16	□□□□□ -1.74
TRM112	YNR046W	UFO1	Q04511	668 aa		4.16	□□□□□ -1.74
TRM112	YNR046W	LEU2	P04173	364 aa	Predicted RBP	4.15	□□□□□ -1.75
TRM112	YNR046W	SWI4	P25302	1093 aa	Known RBP	4.15	□□□□□ -1.75
TRM112	YNR046W	RPS7A	P26786	190 aa	Known RBP	4.15	□□□□□ -1.75
TRM112	YNR046W	ARP2	P32381	391 aa	Known RBP	4.15	□□□□□ -1.75
TRM112	YNR046W	GCD7	P32502	381 aa	Predicted RBP	4.15	□□□□□ -1.75
TRM112	YNR046W	GLG1	P36143	616 aa		4.15	□□□□□ -1.75
TRM112	YNR046W	STB5	P38699	743 aa		4.15	□□□□□ -1.75
TRM112	YNR046W	PCL5	P38794	229 aa		4.15	□□□□□ -1.75
TRM112	YNR046W	NDC80	P40460	691 aa		4.15	□□□□□ -1.75
TRM112	YNR046W	AIM21	P40563	679 aa		4.15	□□□□□ -1.75
TRM112	YNR046W	DIP5	P53388	608 aa		4.15	□□□□□ -1.75
TRM112	YNR046W	TIM44	Q01852	431 aa		4.15	□□□□□ -1.75
TRM112	YNR046W	MFM1	Q02783	413 aa		4.15	□□□□□ -1.75
TRM112	YNR046W	HOF1	Q05080	669 aa		4.15	□□□□□ -1.75
TRM112	YNR046W	CSR1	Q06705	408 aa	Known RBP	4.15	□□□□□ -1.75
TRM112	YNR046W	AIM6	Q07716	390 aa		4.15	□□□□□ -1.75
TRM112	YNR046W	YPL216W	Q08964	1102 aa		4.15	□□□□□ -1.75
TRM112	YNR046W	BMS1	Q08965	1183 aa	Known RBP	4.15	□□□□□ -1.75
TRM112	YNR046W	CHS3	P29465	1165 aa		4.14	□□□□□ -1.75
TRM112	YNR046W	MCM10	P32354	571 aa		4.14	□□□□□ -1.75
TRM112	YNR046W	GMH1	P36125	273 aa		4.14	□□□□□ -1.75
TRM112	YNR046W	YBR138C	P38277	524 aa		4.14	□□□□□ -1.75
TRM112	YNR046W	KSP1	P38691	1029 aa	Known RBP	4.14	□□□□□ -1.75
TRM112	YNR046W	ERP2	P39704	215 aa		4.14	□□□□□ -1.75
TRM112	YNR046W	BST1	P43571	1029 aa		4.14	□□□□□ -1.75
TRM112	YNR046W	NMA2	P53204	395 aa		4.14	□□□□□ -1.75
TRM112	YNR046W	SMX3	P54999	86 aa	Predicted RBP	4.14	□□□□□ -1.75
TRM112	YNR046W	KIN4	Q01919	800 aa		4.14	□□□□□ -1.75
TRM112	YNR046W	TGS1	Q12052	315 aa		4.14	□□□□□ -1.75
TRM112	YNR046W	ACF2	Q12168	779 aa		4.14	□□□□□ -1.75
TRM112	YNR046W	RKI1	Q12189	258 aa		4.14	□□□□□ -1.75
TRM112	YNR046W	TUB2	P02557	457 aa	Known RBP	4.13	□□□□□ -1.75
TRM112	YNR046W	PRE2	P30656	287 aa	Known RBP	4.13	□□□□□ -1.75
TRM112	YNR046W	NUP120	P35729	1037 aa		4.13	□□□□□ -1.75
TRM112	YNR046W	TEF4	P36008	412 aa	Known RBP	4.13	□□□□□ -1.75
TRM112	YNR046W	SET3	P36124	751 aa		4.13	□□□□□ -1.75
TRM112	YNR046W	CCL1	P37366	393 aa		4.13	□□□□□ -1.75
TRM112	YNR046W	PIH1	P38768	344 aa		4.13	□□□□□ -1.75
TRM112	YNR046W	LNP1	P38878	278 aa		4.13	□□□□□ -1.75
TRM112	YNR046W	GIP4	P39732	760 aa		4.13	□□□□□ -1.75
TRM112	YNR046W	SKP2	P42843	763 aa		4.13	□□□□□ -1.75
TRM112	YNR046W	MSE1	P48525	536 aa		4.13	□□□□□ -1.75
TRM112	YNR046W	CTF18	P49956	741 aa		4.13	□□□□□ -1.75
TRM112	YNR046W	NGL2	Q03264	515 aa	Known RBP	4.13	□□□□□ -1.75
TRM112	YNR046W	VID22	Q05934	901 aa		4.13	□□□□□ -1.75
TRM112	YNR046W	COG4	Q06096	861 aa		4.13	□□□□□ -1.75
TRM112	YNR046W	HBT1	Q07653	1046 aa	Known RBP	4.13	□□□□□ -1.75
TRM112	YNR046W	ICL2	Q12031	575 aa		4.13	□□□□□ -1.75
TRM112	YNR046W	TPK1	P06244	397 aa		4.12	□□□□□ -1.75
TRM112	YNR046W	SNF1	P06782	633 aa	Known RBP	4.12	□□□□□ -1.75
TRM112	YNR046W	PET122	P10355	254 aa		4.12	□□□□□ -1.75
TRM112	YNR046W	RPN12	P32496	274 aa		4.12	□□□□□ -1.75
TRM112	YNR046W	LOT5	P34234	306 aa		4.12	□□□□□ -1.75
TRM112	YNR046W	IFA38	P38286	347 aa		4.12	□□□□□ -1.75
TRM112	YNR046W	TMA108	P40462	946 aa		4.12	□□□□□ -1.75
TRM112	YNR046W	MNT3	P40549	630 aa		4.12	□□□□□ -1.75
TRM112	YNR046W	SUN4	P53616	420 aa		4.12	□□□□□ -1.75
TRM112	YNR046W	YMR206W	Q03695	313 aa		4.12	□□□□□ -1.75
TRM112	YNR046W	USA1	Q03714	838 aa		4.12	□□□□□ -1.75
TRM112	YNR046W	YDL073W	Q07454	984 aa		4.12	□□□□□ -1.75
TRM112	YNR046W	YCR061W	P25639	631 aa		4.11	□□□□□ -1.75
TRM112	YNR046W	CNE1	P27825	502 aa		4.11	□□□□□ -1.75
TRM112	YNR046W	CNS1	P33313	385 aa		4.11	□□□□□ -1.75
TRM112	YNR046W	SDH8	P38345	138 aa		4.11	□□□□□ -1.75
TRM112	YNR046W	ARB1	P40024	610 aa	Known RBP	4.11	□□□□□ -1.75
TRM112	YNR046W	ZAP1	P47043	880 aa		4.11	□□□□□ -1.75
TRM112	YNR046W	BNA1	P47096	177 aa		4.11	□□□□□ -1.75
TRM112	YNR046W	YIP4	P53093	235 aa		4.11	□□□□□ -1.75
TRM112	YNR046W	MEP3	P53390	489 aa		4.11	□□□□□ -1.75
TRM112	YNR046W	SPC98	P53540	846 aa		4.11	□□□□□ -1.75
TRM112	YNR046W	SNF12	P53628	566 aa		4.11	□□□□□ -1.75
TRM112	YNR046W	ESF2	P53743	316 aa	Known RBP	4.11	□□□□□ -1.75
TRM112	YNR046W	PUS9	Q12069	462 aa		4.11	□□□□□ -1.75
TRM112	YNR046W	SUL2	Q12325	893 aa		4.11	□□□□□ -1.75
TRM112	YNR046W	LAM4	P38800	1345 aa		4.11	□□□□□ -1.75
TRM112	YNR046W	BDH2	P39713	417 aa		4.1	□□□□□ -1.75
TRM112	YNR046W	YER010C	P40011	234 aa		4.1	□□□□□ -1.75
TRM112	YNR046W	BUD17	P53727	317 aa		4.1	□□□□□ -1.75
TRM112	YNR046W	CBK1	P53894	756 aa		4.1	□□□□□ -1.75
TRM112	YNR046W	GSF2	Q04697	403 aa	Known RBP	4.1	□□□□□ -1.75
TRM112	YNR046W	CRF1	Q04930	467 aa		4.1	□□□□□ -1.75
TRM112	YNR046W	TRM8	Q12009	286 aa		4.1	□□□□□ -1.75
TRM112	YNR046W	COX17	Q12287	69 aa		4.1	□□□□□ -1.75
TRM112	YNR046W	RRI2	Q12348	645 aa		4.1	□□□□□ -1.75
TRM112	YNR046W	YOL087C	Q99247	1116 aa		4.1	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 16.8 ms