RNA–Protein interactions for RNA: YLL011W

SOF1, Transcript of Protein required for biogenesis of 40S (small) ribosomal subunit, yeastyeast

Gene SOF1, Length 1,470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SOF1YLL011W TY1B-AO13527 1196 aaKnown RBP4.73□□□□□ -1.65
SOF1YLL011W YLR302CO13544 120 aa4.73□□□□□ -1.65
SOF1YLL011W SEC53P07283 254 aaKnown RBP4.73□□□□□ -1.65
SOF1YLL011W RPL19AP0CX82 189 aaKnown RBP4.73□□□□□ -1.65
SOF1YLL011W RPL19BP0CX83 189 aaPredicted RBP4.73□□□□□ -1.65
SOF1YLL011W HSF1P10961 833 aa4.73□□□□□ -1.65
SOF1YLL011W PYC1P11154 1178 aaKnown RBP4.73□□□□□ -1.65
SOF1YLL011W FRS1P15624 595 aaKnown RBP4.73□□□□□ -1.65
SOF1YLL011W APL1P27351 700 aa4.73□□□□□ -1.65
SOF1YLL011W PET127P32606 800 aa4.73□□□□□ -1.65
SOF1YLL011W RMA1P36001 430 aaKnown RBP4.73□□□□□ -1.65
SOF1YLL011W FSH1P38777 243 aaKnown RBP4.73□□□□□ -1.65
SOF1YLL011W YJL068CP40363 299 aa4.73□□□□□ -1.65
SOF1YLL011W YIL166CP40445 542 aa4.73□□□□□ -1.65
SOF1YLL011W SPO22P40511 975 aa4.73□□□□□ -1.65
SOF1YLL011W MRX6P48564 524 aa4.73□□□□□ -1.65
SOF1YLL011W DSD1P53095 428 aa4.73□□□□□ -1.65
SOF1YLL011W YGR012WP53206 393 aa4.73□□□□□ -1.65
SOF1YLL011W MDR1P53258 950 aa4.73□□□□□ -1.65
SOF1YLL011W ARP9Q05123 467 aa4.73□□□□□ -1.65
SOF1YLL011W CRD1Q07560 283 aa4.73□□□□□ -1.65
SOF1YLL011W PHM7Q12252 991 aa4.73□□□□□ -1.65
SOF1YLL011W GPR1Q12361 961 aa4.73□□□□□ -1.65
SOF1YLL011W YBR126W-AQ8TGU7 68 aa4.73□□□□□ -1.65
SOF1YLL011W BUD3P25558 1636 aa4.72□□□□□ -1.65
SOF1YLL011W FBP1P09201 348 aa4.72□□□□□ -1.65
SOF1YLL011W CDC24P11433 854 aaPredicted RBP4.72□□□□□ -1.65
SOF1YLL011W YCK2P23292 546 aaKnown RBP4.72□□□□□ -1.65
SOF1YLL011W CTF13P35203 478 aa4.72□□□□□ -1.65
SOF1YLL011W RFC5P38251 354 aa4.72□□□□□ -1.65
SOF1YLL011W YHR078WP38799 552 aa4.72□□□□□ -1.65
SOF1YLL011W SLN1P39928 1220 aaPredicted RBP4.72□□□□□ -1.65
SOF1YLL011W FMP10P40098 244 aa4.72□□□□□ -1.65
SOF1YLL011W BST1P43571 1029 aa4.72□□□□□ -1.65
SOF1YLL011W COG1P53079 417 aa4.72□□□□□ -1.65
SOF1YLL011W PRP3Q03338 469 aaPredicted RBP4.72□□□□□ -1.65
SOF1YLL011W VTI1Q04338 217 aa4.72□□□□□ -1.65
SOF1YLL011W YLR345WQ06137 509 aa4.72□□□□□ -1.65
SOF1YLL011W ADY3Q07732 790 aa4.72□□□□□ -1.65
SOF1YLL011W ENT4Q07872 247 aa4.72□□□□□ -1.65
SOF1YLL011W SGO1Q08490 590 aa4.72□□□□□ -1.65
SOF1YLL011W YPL191CQ08930 360 aa4.72□□□□□ -1.65
SOF1YLL011W SMF3Q12078 473 aaPredicted RBP4.72□□□□□ -1.65
SOF1YLL011W YVC1Q12324 675 aa4.72□□□□□ -1.65
SOF1YLL011W RIB2Q12362 591 aaKnown RBP4.72□□□□□ -1.65
SOF1YLL011W PDR15Q04182 1529 aaKnown RBP4.72□□□□□ -1.65
SOF1YLL011W PRP22P24384 1145 aaKnown RBP4.71□□□□□ -1.66
SOF1YLL011W MNE1P24720 663 aa4.71□□□□□ -1.66
SOF1YLL011W MRP20P32387 263 aa4.71□□□□□ -1.66
SOF1YLL011W MTC7P32633 139 aa4.71□□□□□ -1.66
SOF1YLL011W CTF8P38877 133 aa4.71□□□□□ -1.66
SOF1YLL011W UTP9P38882 575 aaKnown RBP4.71□□□□□ -1.66
SOF1YLL011W YNL195CP40168 261 aa4.71□□□□□ -1.66
SOF1YLL011W YIR007WP40566 764 aa4.71□□□□□ -1.66
SOF1YLL011W PXA1P41909 870 aa4.71□□□□□ -1.66
SOF1YLL011W TAH11P47112 604 aa4.71□□□□□ -1.66
SOF1YLL011W VPS36Q06696 566 aa4.71□□□□□ -1.66
SOF1YLL011W ICL2Q12031 575 aa4.71□□□□□ -1.66
SOF1YLL011W NBP2Q12163 236 aa4.71□□□□□ -1.66
SOF1YLL011W PAR32Q12515 295 aaKnown RBP4.71□□□□□ -1.66
SOF1YLL011W TUB2P02557 457 aaKnown RBP4.7□□□□□ -1.66
SOF1YLL011W HMG2P12684 1045 aa4.7□□□□□ -1.66
SOF1YLL011W RSC6P25632 483 aa4.7□□□□□ -1.66
SOF1YLL011W PEP3P27801 918 aa4.7□□□□□ -1.66
SOF1YLL011W GPI10P30777 616 aa4.7□□□□□ -1.66
SOF1YLL011W AIM26P32858 118 aa4.7□□□□□ -1.66
SOF1YLL011W PZF1P39933 429 aa4.7□□□□□ -1.66
SOF1YLL011W ZRG8P40021 1076 aa4.7□□□□□ -1.66
SOF1YLL011W GID8P40208 455 aa4.7□□□□□ -1.66
SOF1YLL011W PFA3P42836 336 aa4.7□□□□□ -1.66
SOF1YLL011W GSM1P42950 618 aa4.7□□□□□ -1.66
SOF1YLL011W ARC1P46672 376 aaKnown RBP4.7□□□□□ -1.66
SOF1YLL011W SAE2P46946 345 aa4.7□□□□□ -1.66
SOF1YLL011W POL31P46957 487 aa4.7□□□□□ -1.66
SOF1YLL011W SGF73P53165 657 aa4.7□□□□□ -1.66
SOF1YLL011W REG1Q00816 1014 aa4.7□□□□□ -1.66
SOF1YLL011W ATG21Q02887 496 aa4.7□□□□□ -1.66
SOF1YLL011W NGL3Q03210 505 aa4.7□□□□□ -1.66
SOF1YLL011W RAD30Q04049 632 aa4.7□□□□□ -1.66
SOF1YLL011W YDR341CQ05506 607 aaKnown RBP4.7□□□□□ -1.66
SOF1YLL011W CTI6Q08923 506 aa4.7□□□□□ -1.66
SOF1YLL011W GET3Q12154 354 aaKnown RBP4.7□□□□□ -1.66
SOF1YLL011W HSP42Q12329 375 aa4.7□□□□□ -1.66
SOF1YLL011W LCB1P25045 558 aaKnown RBP4.69□□□□□ -1.66
SOF1YLL011W RPS7AP26786 190 aaKnown RBP4.69□□□□□ -1.66
SOF1YLL011W MDL1P33310 695 aa4.69□□□□□ -1.66
SOF1YLL011W WHI3P34761 661 aaKnown RBP4.69□□□□□ -1.66
SOF1YLL011W PSD1P39006 500 aa4.69□□□□□ -1.66
SOF1YLL011W SDP1P40479 209 aa4.69□□□□□ -1.66
SOF1YLL011W LCB2P40970 561 aa4.69□□□□□ -1.66
SOF1YLL011W PRP31P49704 494 aaPredicted RBP4.69□□□□□ -1.66
SOF1YLL011W PSP2P50109 593 aaKnown RBP4.69□□□□□ -1.66
SOF1YLL011W TEL2P53038 688 aa4.69□□□□□ -1.66
SOF1YLL011W YBP2P53169 641 aa4.69□□□□□ -1.66
SOF1YLL011W YML119WQ03208 357 aa4.69□□□□□ -1.66
SOF1YLL011W MSC2Q03455 724 aa4.69□□□□□ -1.66
SOF1YLL011W MUS81Q04149 632 aaPredicted RBP4.69□□□□□ -1.66
SOF1YLL011W AIM32Q04689 311 aa4.69□□□□□ -1.66
SOF1YLL011W GAS5Q08193 484 aa4.69□□□□□ -1.66
SOF1YLL011W ARO1P08566 1588 aaKnown RBP4.69□□□□□ -1.66
Retrieved 100 of 5,963 RNA–protein pairs in 49.9 ms