RNA–Protein interactions for RNA: YKL028W

TFA1, Transcript of TFIIE large subunit, yeastyeast

Gene TFA1, Length 1,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TFA1YKL028W HOT1Q03213 719 aa4.7□□□□□ -1.66
TFA1YKL028W CRD1Q07560 283 aa4.7□□□□□ -1.66
TFA1YKL028W REX3Q12090 404 aa4.7□□□□□ -1.66
TFA1YKL028W NBP2Q12163 236 aa4.7□□□□□ -1.66
TFA1YKL028W PCD1Q12524 340 aa4.7□□□□□ -1.66
TFA1YKL028W COQ4O13525 335 aa4.69□□□□□ -1.66
TFA1YKL028W TPK1P06244 397 aa4.69□□□□□ -1.66
TFA1YKL028W CDC24P11433 854 aaPredicted RBP4.69□□□□□ -1.66
TFA1YKL028W BIK1P11709 440 aa4.69□□□□□ -1.66
TFA1YKL028W OCA4P25366 362 aa4.69□□□□□ -1.66
TFA1YKL028W ECM21P38167 1117 aaKnown RBP4.69□□□□□ -1.66
TFA1YKL028W BST1P43571 1029 aa4.69□□□□□ -1.66
TFA1YKL028W HFM1P51979 1187 aa4.69□□□□□ -1.66
TFA1YKL028W YSA1Q01976 231 aa4.69□□□□□ -1.66
TFA1YKL028W YDR132CQ03900 495 aa4.69□□□□□ -1.66
TFA1YKL028W STP4Q07351 490 aa4.69□□□□□ -1.66
TFA1YKL028W CTI6Q08923 506 aa4.69□□□□□ -1.66
TFA1YKL028W NFI1Q12216 726 aa4.69□□□□□ -1.66
TFA1YKL028W PDH1Q12428 516 aaKnown RBP4.69□□□□□ -1.66
TFA1YKL028W YBR126W-AQ8TGU7 68 aa4.69□□□□□ -1.66
TFA1YKL028W YOR111WQ99210 232 aa4.69□□□□□ -1.66
TFA1YKL028W YLR358CO13565 187 aa4.68□□□□□ -1.66
TFA1YKL028W TUB2P02557 457 aaKnown RBP4.68□□□□□ -1.66
TFA1YKL028W SUI3P09064 285 aaKnown RBP4.68□□□□□ -1.66
TFA1YKL028W HSF1P10961 833 aa4.68□□□□□ -1.66
TFA1YKL028W PRE10P21242 288 aaKnown RBP RIP-Chip data4.68□□□□□ -1.66not detected
TFA1YKL028W REC107P21651 314 aa4.68□□□□□ -1.66
TFA1YKL028W SRO9P25567 434 aaKnown RBP4.68□□□□□ -1.66
TFA1YKL028W CWH43P25618 953 aa4.68□□□□□ -1.66
TFA1YKL028W ARP2P32381 391 aaKnown RBP4.68□□□□□ -1.66
TFA1YKL028W APN2P38207 520 aa4.68□□□□□ -1.66
TFA1YKL028W FTH1P38310 465 aa4.68□□□□□ -1.66
TFA1YKL028W RAI1P53063 387 aaKnown RBP4.68□□□□□ -1.66
TFA1YKL028W SGF73P53165 657 aa4.68□□□□□ -1.66
TFA1YKL028W DUS1P53759 423 aaKnown RBP4.68□□□□□ -1.66
TFA1YKL028W SEC5P89102 971 aa4.68□□□□□ -1.66
TFA1YKL028W AIM32Q04689 311 aa4.68□□□□□ -1.66
TFA1YKL028W RCL1Q08096 367 aaPredicted RBP4.68□□□□□ -1.66
TFA1YKL028W CIR2Q08822 631 aa4.68□□□□□ -1.66
TFA1YKL028W COX17Q12287 69 aa4.68□□□□□ -1.66
TFA1YKL028W GRX6Q12438 231 aa4.68□□□□□ -1.66
TFA1YKL028W CEX1Q12453 761 aa4.68□□□□□ -1.66
TFA1YKL028W ATG11Q12527 1178 aa4.68□□□□□ -1.66
TFA1YKL028W URA3P03962 267 aa4.67□□□□□ -1.66
TFA1YKL028W PCK1P10963 549 aa4.67□□□□□ -1.66
TFA1YKL028W PWP1P21304 576 aaKnown RBP4.67□□□□□ -1.66
TFA1YKL028W RRP7P25368 297 aaPredicted RBP4.67□□□□□ -1.66
TFA1YKL028W RPD3P32561 433 aa4.67□□□□□ -1.66
TFA1YKL028W FLC2P39719 783 aa4.67□□□□□ -1.66
TFA1YKL028W LCB2P40970 561 aa4.67□□□□□ -1.66
TFA1YKL028W MDE1P47095 244 aa4.67□□□□□ -1.66
TFA1YKL028W TEL2P53038 688 aa4.67□□□□□ -1.66
TFA1YKL028W PEF1P53238 335 aa4.67□□□□□ -1.66
TFA1YKL028W ACS1Q01574 713 aa4.67□□□□□ -1.66
TFA1YKL028W ARP9Q05123 467 aa4.67□□□□□ -1.66
TFA1YKL028W XYL2Q07993 356 aa4.67□□□□□ -1.66
TFA1YKL028W TGL5Q12043 749 aa4.67□□□□□ -1.66
TFA1YKL028W NMD4Q12129 218 aa4.67□□□□□ -1.66
TFA1YKL028W GET3Q12154 354 aaKnown RBP4.67□□□□□ -1.66
TFA1YKL028W YLR302CO13544 120 aa4.66□□□□□ -1.66
TFA1YKL028W SUI2P20459 304 aaKnown RBP4.66□□□□□ -1.66
TFA1YKL028W IME1P21190 360 aa4.66□□□□□ -1.66
TFA1YKL028W MRP20P32387 263 aa4.66□□□□□ -1.66
TFA1YKL028W GCS1P35197 352 aa4.66□□□□□ -1.66
TFA1YKL028W UIP5P36137 443 aa4.66□□□□□ -1.66
TFA1YKL028W FMP10P40098 244 aa4.66□□□□□ -1.66
TFA1YKL028W PCL7P40186 285 aa4.66□□□□□ -1.66
TFA1YKL028W CAB2P40506 365 aa4.66□□□□□ -1.66
TFA1YKL028W SEC27P41811 889 aaKnown RBP4.66□□□□□ -1.66
TFA1YKL028W FYV8P46949 817 aaKnown RBP4.66□□□□□ -1.66
TFA1YKL028W YJL055WP47044 245 aa4.66□□□□□ -1.66
TFA1YKL028W DSD1P53095 428 aa4.66□□□□□ -1.66
TFA1YKL028W ART5P53244 586 aaKnown RBP4.66□□□□□ -1.66
TFA1YKL028W OGG1P53397 376 aaPredicted RBP4.66□□□□□ -1.66
TFA1YKL028W TIM11P81449 96 aaPredicted RBP4.66□□□□□ -1.66
TFA1YKL028W OAZ1Q02803 292 aa4.66□□□□□ -1.66
TFA1YKL028W ERB1Q04660 807 aaKnown RBP4.66□□□□□ -1.66
TFA1YKL028W RCO1Q04779 684 aa4.66□□□□□ -1.66
TFA1YKL028W RCN2Q12044 265 aa4.66□□□□□ -1.66
TFA1YKL028W HOS1Q12214 470 aa4.66□□□□□ -1.66
TFA1YKL028W NOP58Q12499 511 aaKnown RBP4.66□□□□□ -1.66
TFA1YKL028W SKS1Q12505 502 aa4.66□□□□□ -1.66
TFA1YKL028W CMP2P14747 604 aa4.65□□□□□ -1.66
TFA1YKL028W THR1P17423 357 aaKnown RBP4.65□□□□□ -1.66
TFA1YKL028W ARG1P22768 420 aa4.65□□□□□ -1.66
TFA1YKL028W STB6P36085 766 aa4.65□□□□□ -1.66
TFA1YKL028W YHR033WP38690 423 aa4.65□□□□□ -1.66
TFA1YKL028W TIF4631P39935 952 aaKnown RBP4.65□□□□□ -1.66
TFA1YKL028W GID8P40208 455 aa4.65□□□□□ -1.66
TFA1YKL028W EOS1P53938 366 aa4.65□□□□□ -1.66
TFA1YKL028W ORC4P54791 529 aa4.65□□□□□ -1.66
TFA1YKL028W LAP3Q01532 483 aaKnown RBP RIP-Chip data4.65□□□□□ -1.66not detected
TFA1YKL028W ECM22Q05958 814 aaPredicted RBP4.65□□□□□ -1.66
TFA1YKL028W ENT4Q07872 247 aa4.65□□□□□ -1.66
TFA1YKL028W CDC45Q08032 650 aa4.65□□□□□ -1.66
TFA1YKL028W KEL3Q08979 651 aaPredicted RBP4.65□□□□□ -1.66
TFA1YKL028W FRE6Q12473 712 aa4.65□□□□□ -1.66
TFA1YKL028W YOL159C-AQ3E769 90 aa4.65□□□□□ -1.66
TFA1YKL028W TAD3Q9URQ3 322 aa4.65□□□□□ -1.66
TFA1YKL028W RPC40P07703 335 aaKnown RBP4.64□□□□□ -1.67
Retrieved 100 of 5,963 RNA–protein pairs in 14.2 ms