RNA–Protein interactions for RNA: YJL087C

TRL1, Transcript of tRNA ligase, yeastyeast

Gene TRL1, Length 2,484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRL1YJL087C YML119WQ03208 357 aa2.19□□□□□ -2.06
TRL1YJL087C SIZ1Q04195 904 aa2.19□□□□□ -2.06
TRL1YJL087C VPS36Q06696 566 aa2.19□□□□□ -2.06
TRL1YJL087C YDL176WQ12027 708 aa2.19□□□□□ -2.06
TRL1YJL087C ISA2Q12425 185 aa2.19□□□□□ -2.06
TRL1YJL087C SKS1Q12505 502 aa2.19□□□□□ -2.06
TRL1YJL087C PAR32Q12515 295 aaKnown RBP2.19□□□□□ -2.06
TRL1YJL087C YBR126W-AQ8TGU7 68 aa2.19□□□□□ -2.06
TRL1YJL087C ISN1Q99312 450 aa2.19□□□□□ -2.06
TRL1YJL087C TPK1P06244 397 aa2.18□□□□□ -2.06
TRL1YJL087C PYC1P11154 1178 aaKnown RBP2.18□□□□□ -2.06
TRL1YJL087C GLK1P17709 500 aaKnown RBP2.18□□□□□ -2.06
TRL1YJL087C GPI10P30777 616 aa2.18□□□□□ -2.06
TRL1YJL087C SEC21P32074 935 aaKnown RBP2.18□□□□□ -2.06
TRL1YJL087C STE14P32584 239 aa2.18□□□□□ -2.06
TRL1YJL087C SRP101P32916 621 aa2.18□□□□□ -2.06
TRL1YJL087C RRM3P38766 723 aa2.18□□□□□ -2.06
TRL1YJL087C YHR078WP38799 552 aa2.18□□□□□ -2.06
TRL1YJL087C PEX7P39108 375 aa2.18□□□□□ -2.06
TRL1YJL087C RGI2P40188 164 aa2.18□□□□□ -2.06
TRL1YJL087C IST3P40565 148 aaPredicted RBP2.18□□□□□ -2.06
TRL1YJL087C PFA3P42836 336 aa2.18□□□□□ -2.06
TRL1YJL087C ROK1P45818 564 aaPredicted RBP2.18□□□□□ -2.06
TRL1YJL087C FYV8P46949 817 aaKnown RBP2.18□□□□□ -2.06
TRL1YJL087C SGF73P53165 657 aa2.18□□□□□ -2.06
TRL1YJL087C YNR061CP53747 219 aa2.18□□□□□ -2.06
TRL1YJL087C CIK1Q01649 594 aa2.18□□□□□ -2.06
TRL1YJL087C RPT6Q01939 405 aaKnown RBP2.18□□□□□ -2.06
TRL1YJL087C OAZ1Q02803 292 aa2.18□□□□□ -2.06
TRL1YJL087C ATG21Q02887 496 aa2.18□□□□□ -2.06
TRL1YJL087C YMR187CQ03236 431 aa2.18□□□□□ -2.06
TRL1YJL087C RMT2Q03305 412 aa2.18□□□□□ -2.06
TRL1YJL087C RAD30Q04049 632 aa2.18□□□□□ -2.06
TRL1YJL087C ENT4Q07872 247 aa2.18□□□□□ -2.06
TRL1YJL087C ESC8Q08119 714 aa2.18□□□□□ -2.06
TRL1YJL087C REX3Q12090 404 aa2.18□□□□□ -2.06
TRL1YJL087C NBP2Q12163 236 aa2.18□□□□□ -2.06
TRL1YJL087C YOR111WQ99210 232 aa2.18□□□□□ -2.06
TRL1YJL087C CET1O13297 549 aaPredicted RBP2.18□□□□□ -2.06
TRL1YJL087C TY2A-LR1P0C2J4 438 aa2.18□□□□□ -2.06
TRL1YJL087C TY2A-FP0CX61 438 aa2.18□□□□□ -2.06
TRL1YJL087C TY2A-GR2P0CX62 438 aa2.18□□□□□ -2.06
TRL1YJL087C HMG2P12684 1045 aa2.18□□□□□ -2.06
TRL1YJL087C CAF20P12962 161 aaKnown RBP2.18□□□□□ -2.06
TRL1YJL087C PRP4P20053 465 aaKnown RBP2.18□□□□□ -2.06
TRL1YJL087C ERG8P24521 451 aa2.18□□□□□ -2.06
TRL1YJL087C OCA4P25366 362 aa2.18□□□□□ -2.06
TRL1YJL087C TY2A-CP25383 438 aa2.18□□□□□ -2.06
TRL1YJL087C POT1P27796 417 aaKnown RBP RIP-Chip data2.18□□□□□ -2.06not detected
TRL1YJL087C CAP1P28495 268 aaKnown RBP2.18□□□□□ -2.06
TRL1YJL087C EFT1P32324 842 aaKnown RBP2.18□□□□□ -2.06
TRL1YJL087C PUP2P32379 260 aa2.18□□□□□ -2.06
TRL1YJL087C YHR112CP38716 378 aa2.18□□□□□ -2.06
TRL1YJL087C CRG1P38892 291 aaRIP-Chip data2.18□□□□□ -2.06not detected
TRL1YJL087C SMF1P38925 575 aa2.18□□□□□ -2.06
TRL1YJL087C LYS9P38999 446 aa2.18□□□□□ -2.06
TRL1YJL087C GDI1P39958 451 aaKnown RBP2.18□□□□□ -2.06
TRL1YJL087C YNL195CP40168 261 aa2.18□□□□□ -2.06
TRL1YJL087C MET18P40469 1032 aa2.18□□□□□ -2.06
TRL1YJL087C NAS2P40555 220 aa2.18□□□□□ -2.06
TRL1YJL087C MET28P40573 187 aa2.18□□□□□ -2.06
TRL1YJL087C FOL2P51601 243 aaKnown RBP2.18□□□□□ -2.06
TRL1YJL087C VPS4P52917 437 aa2.18□□□□□ -2.06
TRL1YJL087C INN1P53901 409 aa2.18□□□□□ -2.06
TRL1YJL087C REC102Q02721 264 aa2.18□□□□□ -2.06
TRL1YJL087C PEX25Q02969 394 aa2.18□□□□□ -2.06
TRL1YJL087C NGL2Q03264 515 aaKnown RBP2.18□□□□□ -2.06
TRL1YJL087C TY2A-DR2Q03483 438 aa2.18□□□□□ -2.06
TRL1YJL087C ARP9Q05123 467 aa2.18□□□□□ -2.06
TRL1YJL087C YDR341CQ05506 607 aaKnown RBP2.18□□□□□ -2.06
TRL1YJL087C KEL3Q08979 651 aaPredicted RBP2.18□□□□□ -2.06
TRL1YJL087C RCN2Q12044 265 aa2.18□□□□□ -2.06
TRL1YJL087C UPC2Q12151 913 aa2.18□□□□□ -2.06
TRL1YJL087C GET3Q12154 354 aaKnown RBP2.18□□□□□ -2.06
TRL1YJL087C TY2A-BQ12260 438 aa2.18□□□□□ -2.06
TRL1YJL087C TY2A-OR2Q12293 438 aa2.18□□□□□ -2.06
TRL1YJL087C TY2A-DR1Q12392 438 aa2.18□□□□□ -2.06
TRL1YJL087C PDH1Q12428 516 aaKnown RBP2.18□□□□□ -2.06
TRL1YJL087C TY2A-OR1Q12439 438 aa2.18□□□□□ -2.06
TRL1YJL087C TY2A-DR3Q99303 438 aa2.18□□□□□ -2.06
TRL1YJL087C YLR302CO13544 120 aa2.17□□□□□ -2.06
TRL1YJL087C CBS1P14066 229 aa2.17□□□□□ -2.06
TRL1YJL087C REC107P21651 314 aa2.17□□□□□ -2.06
TRL1YJL087C TRX1P22217 103 aaKnown RBP2.17□□□□□ -2.06
TRL1YJL087C RSC6P25632 483 aa2.17□□□□□ -2.06
TRL1YJL087C APL1P27351 700 aa2.17□□□□□ -2.06
TRL1YJL087C URA7P28274 579 aaKnown RBP2.17□□□□□ -2.06
TRL1YJL087C YHR218WP38899 603 aa2.17□□□□□ -2.06
TRL1YJL087C PZF1P39933 429 aa2.17□□□□□ -2.06
TRL1YJL087C VFA1P40080 203 aa2.17□□□□□ -2.06
TRL1YJL087C FTR1P40088 404 aa2.17□□□□□ -2.06
TRL1YJL087C SEC28P40509 296 aaKnown RBP2.17□□□□□ -2.06
TRL1YJL087C URM1P40554 99 aaPredicted RBP2.17□□□□□ -2.06
TRL1YJL087C BUD27P43573 796 aaKnown RBP RIP-Chip data2.17□□□□□ -2.06not detected
TRL1YJL087C CIT3P43635 486 aa2.17□□□□□ -2.06
TRL1YJL087C MDE1P47095 244 aa2.17□□□□□ -2.06
TRL1YJL087C AAD10P47182 288 aa2.17□□□□□ -2.06
TRL1YJL087C PRP31P49704 494 aaPredicted RBP2.17□□□□□ -2.06
TRL1YJL087C PSP2P50109 593 aaKnown RBP2.17□□□□□ -2.06
TRL1YJL087C SQS1P53866 767 aaKnown RBP2.17□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 42.1 ms