RNA–Protein interactions for RNA: YJL001W

PRE3, Transcript of Beta 1 subunit of the 20S proteasome, yeastyeast

Gene PRE3, Length 648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE3YJL001W PCF11P39081 626 aaPredicted RBP6.62□□□□□ -1.35
PRE3YJL001W FHL1P39521 936 aa6.62□□□□□ -1.35
PRE3YJL001W AVT2P39981 480 aa6.62□□□□□ -1.35
PRE3YJL001W GIP2P40036 548 aa6.62□□□□□ -1.35
PRE3YJL001W ERG10P41338 398 aaKnown RBP6.62□□□□□ -1.35
PRE3YJL001W SMC3P47037 1230 aa6.62□□□□□ -1.35
PRE3YJL001W MUB1Q03162 620 aa6.62□□□□□ -1.35
PRE3YJL001W GPM1P00950 247 aaKnown RBP6.61□□□□□ -1.35
PRE3YJL001W SBA1P28707 216 aaKnown RBP6.61□□□□□ -1.35
PRE3YJL001W BMH1P29311 267 aaKnown RBP6.61□□□□□ -1.35
PRE3YJL001W ABD1P32783 436 aaPredicted RBP6.61□□□□□ -1.35
PRE3YJL001W PRX1P34227 261 aaKnown RBP6.61□□□□□ -1.35
PRE3YJL001W YBR184WP38299 523 aa6.61□□□□□ -1.35
PRE3YJL001W SAH1P39954 449 aaKnown RBP6.61□□□□□ -1.35
PRE3YJL001W KAP123P40069 1113 aaKnown RBP6.61□□□□□ -1.35
PRE3YJL001W DSE1P40077 573 aa6.61□□□□□ -1.35
PRE3YJL001W SHQ1P40486 507 aaPredicted RBP6.61□□□□□ -1.35
PRE3YJL001W GCV1P48015 400 aa6.61□□□□□ -1.35
PRE3YJL001W TIM8P57744 87 aa6.61□□□□□ -1.35
PRE3YJL001W TSR1Q07381 788 aaKnown RBP6.61□□□□□ -1.35
PRE3YJL001W SLP1Q12232 587 aa6.61□□□□□ -1.35
PRE3YJL001W MED1Q12321 566 aa6.61□□□□□ -1.35
PRE3YJL001W TRA1P38811 3744 aa6.61□□□□□ -1.35
PRE3YJL001W GAL10P04397 699 aa6.6□□□□□ -1.35
PRE3YJL001W RNR1P21524 888 aaKnown RBP6.6□□□□□ -1.35
PRE3YJL001W NAR1P23503 491 aaKnown RBP6.6□□□□□ -1.35
PRE3YJL001W SAT4P25333 603 aaKnown RBP6.6□□□□□ -1.35
PRE3YJL001W RRT12P25381 491 aa6.6□□□□□ -1.35
PRE3YJL001W RDS1P25611 832 aa6.6□□□□□ -1.35
PRE3YJL001W SWI3P32591 825 aa6.6□□□□□ -1.35
PRE3YJL001W MRP8P35719 219 aa6.6□□□□□ -1.35
PRE3YJL001W SEA4P38164 1038 aa6.6□□□□□ -1.35
PRE3YJL001W ATG12P38316 186 aa6.6□□□□□ -1.35
PRE3YJL001W TED1P40533 473 aa6.6□□□□□ -1.35
PRE3YJL001W YJR054WP47114 497 aa6.6□□□□□ -1.35
PRE3YJL001W TOF2Q02208 771 aa6.6□□□□□ -1.35
PRE3YJL001W SHE9Q04172 456 aa6.6□□□□□ -1.35
PRE3YJL001W VPS20Q04272 221 aa6.6□□□□□ -1.35
PRE3YJL001W ESC2Q06340 456 aa6.6□□□□□ -1.35
PRE3YJL001W SPO75Q07798 868 aa6.6□□□□□ -1.35
PRE3YJL001W RLP24Q07915 199 aaKnown RBP6.6□□□□□ -1.35
PRE3YJL001W MLH2Q07980 695 aa6.6□□□□□ -1.35
PRE3YJL001W ABP140Q08641 628 aaKnown RBP6.6□□□□□ -1.35
PRE3YJL001W CHS2P14180 963 aa6.59□□□□□ -1.35
PRE3YJL001W CDC42P19073 191 aa6.59□□□□□ -1.35
PRE3YJL001W SYP1P25623 870 aaKnown RBP6.59□□□□□ -1.35
PRE3YJL001W CSE1P33307 960 aa6.59□□□□□ -1.35
PRE3YJL001W RRP14P36080 434 aaKnown RBP6.59□□□□□ -1.35
PRE3YJL001W VBA5P36172 582 aa6.59□□□□□ -1.35
PRE3YJL001W REI1P38344 393 aaPredicted RBP6.59□□□□□ -1.35
PRE3YJL001W GEM1P39722 662 aa6.59□□□□□ -1.35
PRE3YJL001W GUF1P46943 645 aa6.59□□□□□ -1.35
PRE3YJL001W ALG12P53730 551 aa6.59□□□□□ -1.35
PRE3YJL001W UBP3Q01477 912 aaKnown RBP RIP-Chip data6.59□□□□□ -1.35 RIP-Chip
PRE3YJL001W MZM1Q03429 123 aaPredicted RBP6.59□□□□□ -1.35
PRE3YJL001W RKM2Q03942 479 aa6.59□□□□□ -1.35
PRE3YJL001W YPL216WQ08964 1102 aa6.59□□□□□ -1.35
PRE3YJL001W SLX4Q12098 748 aa6.59□□□□□ -1.35
PRE3YJL001W NBP2Q12163 236 aa6.59□□□□□ -1.35
PRE3YJL001W HSF1P10961 833 aa6.58□□□□□ -1.36
PRE3YJL001W INO1P11986 533 aa6.58□□□□□ -1.36
PRE3YJL001W SAC7P17121 654 aa6.58□□□□□ -1.36
PRE3YJL001W CDC15P27636 974 aa6.58□□□□□ -1.36
PRE3YJL001W SAP190P36123 1033 aa6.58□□□□□ -1.36
PRE3YJL001W UTH1P36135 365 aa6.58□□□□□ -1.36
PRE3YJL001W ALG14P38242 237 aa6.58□□□□□ -1.36
PRE3YJL001W OSW5P40219 148 aa6.58□□□□□ -1.36
PRE3YJL001W IRR1P40541 1150 aa6.58□□□□□ -1.36
PRE3YJL001W NPA3P47122 385 aa6.58□□□□□ -1.36
PRE3YJL001W TDA7P53882 636 aaPredicted RBP6.58□□□□□ -1.36
PRE3YJL001W RPA49Q01080 415 aaPredicted RBP6.58□□□□□ -1.36
PRE3YJL001W MTD1Q02046 320 aaKnown RBP6.58□□□□□ -1.36
PRE3YJL001W YPL014WQ02606 381 aa6.58□□□□□ -1.36
PRE3YJL001W YCG1Q06680 1035 aa6.58□□□□□ -1.36
PRE3YJL001W IWR1Q07532 353 aaPredicted RBP6.58□□□□□ -1.36
PRE3YJL001W YOR387CQ08910 206 aa6.58□□□□□ -1.36
PRE3YJL001W YLL054CQ12244 843 aa6.58□□□□□ -1.36
PRE3YJL001W LCB4Q12246 624 aa6.58□□□□□ -1.36
PRE3YJL001W LPX1Q12405 387 aaKnown RBP6.58□□□□□ -1.36
PRE3YJL001W COX11P19516 300 aaKnown RBP6.57□□□□□ -1.36
PRE3YJL001W VBA3P25594 458 aa6.57□□□□□ -1.36
PRE3YJL001W EFB1P32471 206 aaKnown RBP6.57□□□□□ -1.36
PRE3YJL001W TFB1P32776 642 aa6.57□□□□□ -1.36
PRE3YJL001W PDR3P33200 976 aa6.57□□□□□ -1.36
PRE3YJL001W WSC4P38739 605 aa6.57□□□□□ -1.36
PRE3YJL001W GDH3P39708 457 aa6.57□□□□□ -1.36
PRE3YJL001W HEM14P40012 539 aa6.57□□□□□ -1.36
PRE3YJL001W CNN1P43618 361 aa6.57□□□□□ -1.36
PRE3YJL001W TOS3P43637 560 aa6.57□□□□□ -1.36
PRE3YJL001W YNR063WP53749 607 aa6.57□□□□□ -1.36
PRE3YJL001W HEL2Q05580 639 aaKnown RBP6.57□□□□□ -1.36
PRE3YJL001W MCM7P38132 845 aa6.56□□□□□ -1.36
PRE3YJL001W RFT1P38206 574 aaPredicted RBP6.56□□□□□ -1.36
PRE3YJL001W YHR020WP38708 688 aaKnown RBP6.56□□□□□ -1.36
PRE3YJL001W PIK1P39104 1066 aa6.56□□□□□ -1.36
PRE3YJL001W CPR7P47103 393 aa6.56□□□□□ -1.36
PRE3YJL001W YAT1P80235 687 aa6.56□□□□□ -1.36
PRE3YJL001W CEF1Q03654 590 aaPredicted RBP6.56□□□□□ -1.36
PRE3YJL001W PPM1Q04081 328 aa6.56□□□□□ -1.36
PRE3YJL001W DDC1Q08949 612 aa6.56□□□□□ -1.36
Retrieved 100 of 5,963 RNA–protein pairs in 11.5 ms