RNA–Protein interactions for RNA: YIL144W

NDC80, Transcript of Component of the kinetochore-associated Ndc80 complex, yeast

Gene NDC80, Length 2,076 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NDC80	YIL144W	HSP82	P02829	709 aa	Known RBP	3.67	□□□□□ -1.82
NDC80	YIL144W	SEC15	P22224	910 aa		3.67	□□□□□ -1.82
NDC80	YIL144W	VPH1	P32563	840 aa	Known RBP	3.67	□□□□□ -1.82
NDC80	YIL144W	NUP120	P35729	1037 aa		3.67	□□□□□ -1.82
NDC80	YIL144W	MRPL7	P36519	292 aa		3.67	□□□□□ -1.82
NDC80	YIL144W	CTP1	P38152	299 aa		3.67	□□□□□ -1.82
NDC80	YIL144W	YBR138C	P38277	524 aa		3.67	□□□□□ -1.82
NDC80	YIL144W	REV7	P38927	245 aa		3.67	□□□□□ -1.82
NDC80	YIL144W	PIG2	P40187	538 aa		3.67	□□□□□ -1.82
NDC80	YIL144W	SUN4	P53616	420 aa		3.67	□□□□□ -1.82
NDC80	YIL144W	SPC19	Q03954	165 aa		3.67	□□□□□ -1.82
NDC80	YIL144W	AAD4	Q07747	329 aa		3.67	□□□□□ -1.82
NDC80	YIL144W	SDH5	Q08230	162 aa		3.67	□□□□□ -1.82
NDC80	YIL144W	NEW1	Q08972	1196 aa	Known RBP	3.67	□□□□□ -1.82
NDC80	YIL144W	ICL2	Q12031	575 aa		3.67	□□□□□ -1.82
NDC80	YIL144W	USV1	Q12132	391 aa		3.67	□□□□□ -1.82
NDC80	YIL144W	HOS1	Q12214	470 aa		3.67	□□□□□ -1.82
NDC80	YIL144W	PCK1	P10963	549 aa		3.66	□□□□□ -1.82
NDC80	YIL144W	POL3	P15436	1097 aa		3.66	□□□□□ -1.82
NDC80	YIL144W	TPM1	P17536	199 aa	Known RBP	3.66	□□□□□ -1.82
NDC80	YIL144W	SIR1	P21691	654 aa		3.66	□□□□□ -1.82
NDC80	YIL144W	PMI40	P29952	429 aa	Known RBP	3.66	□□□□□ -1.82
NDC80	YIL144W	ELF1	P36053	145 aa		3.66	□□□□□ -1.82
NDC80	YIL144W	YLF2	P38746	405 aa		3.66	□□□□□ -1.82
NDC80	YIL144W	TMA108	P40462	946 aa		3.66	□□□□□ -1.82
NDC80	YIL144W	TEL2	P53038	688 aa		3.66	□□□□□ -1.82
NDC80	YIL144W	COS12	P53053	380 aa		3.66	□□□□□ -1.82
NDC80	YIL144W	MUK1	Q02866	612 aa		3.66	□□□□□ -1.82
NDC80	YIL144W	ADE3	P07245	946 aa	Known RBP	3.66	□□□□□ -1.82
NDC80	YIL144W	PHO81	P17442	1178 aa		3.66	□□□□□ -1.82
NDC80	YIL144W	VPS33	P20795	691 aa		3.66	□□□□□ -1.82
NDC80	YIL144W	PRP45	P28004	379 aa	Predicted RBP	3.66	□□□□□ -1.82
NDC80	YIL144W	NOP4	P37838	685 aa	Known RBP	3.66	□□□□□ -1.82
NDC80	YIL144W	VPS8	P39702	1274 aa		3.66	□□□□□ -1.82
NDC80	YIL144W	MDR1	P53258	950 aa		3.66	□□□□□ -1.82
NDC80	YIL144W	SLI1	P53304	468 aa		3.66	□□□□□ -1.82
NDC80	YIL144W	PRP3	Q03338	469 aa	Predicted RBP	3.66	□□□□□ -1.82
NDC80	YIL144W	YMR206W	Q03695	313 aa		3.66	□□□□□ -1.82
NDC80	YIL144W	CLF1	Q12309	687 aa	Predicted RBP	3.66	□□□□□ -1.82
NDC80	YIL144W	KRR1	P25586	316 aa	Predicted RBP	3.65	□□□□□ -1.83
NDC80	YIL144W	FUB1	P25659	250 aa		3.65	□□□□□ -1.83
NDC80	YIL144W	SAS3	P34218	831 aa		3.65	□□□□□ -1.83
NDC80	YIL144W	YKL050C	P35736	922 aa		3.65	□□□□□ -1.83
NDC80	YIL144W	RXT2	P38255	430 aa		3.65	□□□□□ -1.83
NDC80	YIL144W	RRT6	P53117	311 aa	Predicted RBP	3.65	□□□□□ -1.83
NDC80	YIL144W	MEP3	P53390	489 aa		3.65	□□□□□ -1.83
NDC80	YIL144W	EFR3	Q03653	782 aa	Known RBP	3.65	□□□□□ -1.83
NDC80	YIL144W	RCF1	Q03713	159 aa		3.65	□□□□□ -1.83
NDC80	YIL144W	IWR1	Q07532	353 aa	Predicted RBP	3.65	□□□□□ -1.83
NDC80	YIL144W	AIM41	Q12032	185 aa		3.65	□□□□□ -1.83
NDC80	YIL144W	PHO5	P00635	467 aa		3.64	□□□□□ -1.83
NDC80	YIL144W	NAT1	P12945	854 aa	Known RBP	3.64	□□□□□ -1.83
NDC80	YIL144W	PRE2	P30656	287 aa	Known RBP	3.64	□□□□□ -1.83
NDC80	YIL144W	VMA8	P32610	256 aa	Known RBP	3.64	□□□□□ -1.83
NDC80	YIL144W	PEX5	P35056	612 aa		3.64	□□□□□ -1.83
NDC80	YIL144W	TAF5	P38129	798 aa		3.64	□□□□□ -1.83
NDC80	YIL144W	CAJ1	P39101	391 aa		3.64	□□□□□ -1.83
NDC80	YIL144W	SGM1	P47166	707 aa		3.64	□□□□□ -1.83
NDC80	YIL144W	YGR151C	P53287	111 aa		3.64	□□□□□ -1.83
NDC80	YIL144W	GTR1	Q00582	310 aa		3.64	□□□□□ -1.83
NDC80	YIL144W	ERO1	Q03103	563 aa		3.64	□□□□□ -1.83
NDC80	YIL144W	TRS31	Q03337	283 aa		3.64	□□□□□ -1.83
NDC80	YIL144W	SPN1	Q06505	410 aa	Predicted RBP	3.64	□□□□□ -1.83
NDC80	YIL144W	TUF1	P02992	437 aa	Known RBP	3.64	□□□□□ -1.83
NDC80	YIL144W	TRM2	P33753	639 aa		3.64	□□□□□ -1.83
NDC80	YIL144W	IFA38	P38286	347 aa		3.64	□□□□□ -1.83
NDC80	YIL144W	GIP4	P39732	760 aa		3.64	□□□□□ -1.83
NDC80	YIL144W	YEL025C	P39991	1188 aa		3.64	□□□□□ -1.83
NDC80	YIL144W	NMA2	P53204	395 aa		3.64	□□□□□ -1.83
NDC80	YIL144W	DIP5	P53388	608 aa		3.64	□□□□□ -1.83
NDC80	YIL144W	RRP9	Q06506	573 aa	Known RBP	3.64	□□□□□ -1.83
NDC80	YIL144W	CRD1	Q07560	283 aa		3.64	□□□□□ -1.83
NDC80	YIL144W	TRM8	Q12009	286 aa		3.64	□□□□□ -1.83
NDC80	YIL144W	RIT1	P23796	513 aa		3.63	□□□□□ -1.83
NDC80	YIL144W	YCL049C	P25577	312 aa		3.63	□□□□□ -1.83
NDC80	YIL144W	AAD3	P25612	363 aa		3.63	□□□□□ -1.83
NDC80	YIL144W	KSP1	P38691	1029 aa	Known RBP	3.63	□□□□□ -1.83
NDC80	YIL144W	YJL193W	P39542	402 aa		3.63	□□□□□ -1.83
NDC80	YIL144W	YNL058C	P53947	316 aa		3.63	□□□□□ -1.83
NDC80	YIL144W	RPS15	Q01855	142 aa	Known RBP	3.63	□□□□□ -1.83
NDC80	YIL144W	USA1	Q03714	838 aa		3.63	□□□□□ -1.83
NDC80	YIL144W	HOF1	Q05080	669 aa		3.63	□□□□□ -1.83
NDC80	YIL144W	YDR286C	Q05530	114 aa		3.63	□□□□□ -1.83
NDC80	YIL144W	BLS1	Q06071	122 aa		3.63	□□□□□ -1.83
NDC80	YIL144W	OPY2	Q06810	360 aa		3.63	□□□□□ -1.83
NDC80	YIL144W	YDL086W	Q07505	273 aa		3.63	□□□□□ -1.83
NDC80	YIL144W	AIM6	Q07716	390 aa		3.63	□□□□□ -1.83
NDC80	YIL144W	HSP42	Q12329	375 aa		3.63	□□□□□ -1.83
NDC80	YIL144W	SNF1	P06782	633 aa	Known RBP	3.63	□□□□□ -1.83
NDC80	YIL144W	MTF2	P10849	440 aa		3.63	□□□□□ -1.83
NDC80	YIL144W	SPO16	P17122	198 aa		3.63	□□□□□ -1.83
NDC80	YIL144W	PPE1	P38796	400 aa		3.63	□□□□□ -1.83
NDC80	YIL144W	CHS7	P38843	316 aa		3.63	□□□□□ -1.83
NDC80	YIL144W	IML2	P47031	731 aa		3.63	□□□□□ -1.83
NDC80	YIL144W	SMX3	P54999	86 aa	Predicted RBP	3.63	□□□□□ -1.83
NDC80	YIL144W	VTI1	Q04338	217 aa		3.63	□□□□□ -1.83
NDC80	YIL144W	STE4	P18851	423 aa		3.62	□□□□□ -1.83
NDC80	YIL144W	CLB4	P24871	460 aa		3.62	□□□□□ -1.83
NDC80	YIL144W	RPS7A	P26786	190 aa	Known RBP	3.62	□□□□□ -1.83
NDC80	YIL144W	DSS4	P32601	143 aa		3.62	□□□□□ -1.83

Retrieved 100 of 5,963 RNA–protein pairs in 17.2 ms