RNA–Protein interactions for RNA: YFL002C

SPB4, Transcript of Putative ATP-dependent RNA helicase, yeastyeast

Gene SPB4, Length 1,821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPB4YFL002C SFI1Q12369 946 aa4.43□□□□□ -1.7
SPB4YFL002C TRM11Q12463 433 aa4.43□□□□□ -1.7
SPB4YFL002C PGA3Q12746 312 aaKnown RBP4.43□□□□□ -1.7
SPB4YFL002C ARG3P05150 338 aa4.42□□□□□ -1.7
SPB4YFL002C CTT1P06115 562 aa4.42□□□□□ -1.7
SPB4YFL002C SEC53P07283 254 aaKnown RBP4.42□□□□□ -1.7
SPB4YFL002C CDC24P11433 854 aaPredicted RBP4.42□□□□□ -1.7
SPB4YFL002C RPC53P25441 422 aa4.42□□□□□ -1.7
SPB4YFL002C RPS7AP26786 190 aaKnown RBP4.42□□□□□ -1.7
SPB4YFL002C DCG1P32460 244 aa4.42□□□□□ -1.7
SPB4YFL002C KAE1P36132 386 aa4.42□□□□□ -1.7
SPB4YFL002C EHT1P38295 451 aa4.42□□□□□ -1.7
SPB4YFL002C LSM5P40089 93 aaKnown RBP4.42□□□□□ -1.7
SPB4YFL002C CSL4P53859 292 aaPredicted RBP4.42□□□□□ -1.7
SPB4YFL002C YSA1Q01976 231 aa4.42□□□□□ -1.7
SPB4YFL002C ERO1Q03103 563 aa4.42□□□□□ -1.7
SPB4YFL002C RCO1Q04779 684 aa4.42□□□□□ -1.7
SPB4YFL002C THI22Q06490 572 aa4.42□□□□□ -1.7
SPB4YFL002C HIF1Q12373 385 aa4.42□□□□□ -1.7
SPB4YFL002C SMC6Q12749 1114 aa4.42□□□□□ -1.7
SPB4YFL002C MET17P06106 444 aa4.42□□□□□ -1.7
SPB4YFL002C RPB2P08518 1224 aaKnown RBP4.42□□□□□ -1.7
SPB4YFL002C CDC6P09119 513 aa4.42□□□□□ -1.7
SPB4YFL002C TY2A-LR1P0C2J4 438 aa4.42□□□□□ -1.7
SPB4YFL002C TY2A-FP0CX61 438 aa4.42□□□□□ -1.7
SPB4YFL002C TY2A-GR2P0CX62 438 aa4.42□□□□□ -1.7
SPB4YFL002C PET122P10355 254 aa4.42□□□□□ -1.7
SPB4YFL002C SEC12P11655 471 aa4.42□□□□□ -1.7
SPB4YFL002C PDX1P16451 410 aa4.42□□□□□ -1.7
SPB4YFL002C TUP1P16649 713 aa4.42□□□□□ -1.7
SPB4YFL002C TY2A-CP25383 438 aa4.42□□□□□ -1.7
SPB4YFL002C ERG3P32353 365 aa4.42□□□□□ -1.7
SPB4YFL002C MRP20P32387 263 aa4.42□□□□□ -1.7
SPB4YFL002C ECM32P32644 1121 aaKnown RBP4.42□□□□□ -1.7
SPB4YFL002C MAC1P35192 417 aa4.42□□□□□ -1.7
SPB4YFL002C MTH1P35198 433 aa4.42□□□□□ -1.7
SPB4YFL002C SRP72P38688 640 aaKnown RBP4.42□□□□□ -1.7
SPB4YFL002C UTP9P38882 575 aaKnown RBP4.42□□□□□ -1.7
SPB4YFL002C YGR130CP53278 816 aa4.42□□□□□ -1.7
SPB4YFL002C VPS62P53285 467 aa4.42□□□□□ -1.7
SPB4YFL002C YGR250CP53316 781 aaKnown RBP4.42□□□□□ -1.7
SPB4YFL002C VPS75P53853 264 aa4.42□□□□□ -1.7
SPB4YFL002C YPL108WQ02872 168 aaPredicted RBP4.42□□□□□ -1.7
SPB4YFL002C FDC1Q03034 503 aa4.42□□□□□ -1.7
SPB4YFL002C TY2A-DR2Q03483 438 aa4.42□□□□□ -1.7
SPB4YFL002C CTK1Q03957 528 aaKnown RBP4.42□□□□□ -1.7
SPB4YFL002C VAM6Q07468 1049 aa4.42□□□□□ -1.7
SPB4YFL002C TY2A-BQ12260 438 aa4.42□□□□□ -1.7
SPB4YFL002C TY2A-OR2Q12293 438 aa4.42□□□□□ -1.7
SPB4YFL002C TY2A-DR1Q12392 438 aa4.42□□□□□ -1.7
SPB4YFL002C NPC2Q12408 173 aa4.42□□□□□ -1.7
SPB4YFL002C TY2A-OR1Q12439 438 aa4.42□□□□□ -1.7
SPB4YFL002C YBR126W-AQ8TGU7 68 aa4.42□□□□□ -1.7
SPB4YFL002C YOR111WQ99210 232 aa4.42□□□□□ -1.7
SPB4YFL002C TY2A-DR3Q99303 438 aa4.42□□□□□ -1.7
SPB4YFL002C TUB2P02557 457 aaKnown RBP4.41□□□□□ -1.7
SPB4YFL002C SUI3P09064 285 aaKnown RBP4.41□□□□□ -1.7
SPB4YFL002C VPS33P20795 691 aa4.41□□□□□ -1.7
SPB4YFL002C EMC1P25574 760 aa4.41□□□□□ -1.7
SPB4YFL002C MUM2P38236 366 aa4.41□□□□□ -1.7
SPB4YFL002C ETP1P38748 585 aaKnown RBP4.41□□□□□ -1.7
SPB4YFL002C LRP1P38801 184 aaKnown RBP4.41□□□□□ -1.7
SPB4YFL002C LYS9P38999 446 aa4.41□□□□□ -1.7
SPB4YFL002C FMP10P40098 244 aa4.41□□□□□ -1.7
SPB4YFL002C MRPS35P53292 345 aa4.41□□□□□ -1.7
SPB4YFL002C MEH1Q02205 184 aa4.41□□□□□ -1.7
SPB4YFL002C YPL034WQ03083 165 aa4.41□□□□□ -1.7
SPB4YFL002C YFT2Q06676 274 aa4.41□□□□□ -1.7
SPB4YFL002C CYC7P00045 113 aa4.4□□□□□ -1.7
SPB4YFL002C ROX1P25042 368 aa4.4□□□□□ -1.7
SPB4YFL002C TOS1P38288 455 aa4.4□□□□□ -1.7
SPB4YFL002C COS111P38308 924 aa4.4□□□□□ -1.7
SPB4YFL002C STB5P38699 743 aa4.4□□□□□ -1.7
SPB4YFL002C YEL025CP39991 1188 aa4.4□□□□□ -1.7
SPB4YFL002C ZAP1P47043 880 aa4.4□□□□□ -1.7
SPB4YFL002C VPS4P52917 437 aa4.4□□□□□ -1.7
SPB4YFL002C MTL1P53214 551 aa4.4□□□□□ -1.7
SPB4YFL002C RPT6Q01939 405 aaKnown RBP4.4□□□□□ -1.7
SPB4YFL002C YMR155WQ03795 547 aa4.4□□□□□ -1.7
SPB4YFL002C DUS4Q06063 367 aa4.4□□□□□ -1.7
SPB4YFL002C ARR3Q06598 404 aa4.4□□□□□ -1.7
SPB4YFL002C NOP12Q08208 459 aaKnown RBP4.4□□□□□ -1.7
SPB4YFL002C YOR352WQ08816 343 aa4.4□□□□□ -1.7
SPB4YFL002C NMD4Q12129 218 aa4.4□□□□□ -1.7
SPB4YFL002C ATP2P00830 511 aaKnown RBP4.39□□□□□ -1.71
SPB4YFL002C PRE2P30656 287 aaKnown RBP4.39□□□□□ -1.71
SPB4YFL002C SWC3P31376 625 aa4.39□□□□□ -1.71
SPB4YFL002C DBF4P32325 704 aa4.39□□□□□ -1.71
SPB4YFL002C VPH1P32563 840 aaKnown RBP4.39□□□□□ -1.71
SPB4YFL002C PSD1P39006 500 aa4.39□□□□□ -1.71
SPB4YFL002C YJL193WP39542 402 aa4.39□□□□□ -1.71
SPB4YFL002C LRO1P40345 661 aa4.39□□□□□ -1.71
SPB4YFL002C SPO22P40511 975 aa4.39□□□□□ -1.71
SPB4YFL002C CTH1P47976 325 aa4.39□□□□□ -1.71
SPB4YFL002C COS12P53053 380 aa4.39□□□□□ -1.71
SPB4YFL002C SNO2P53823 222 aa4.39□□□□□ -1.71
SPB4YFL002C CLU1Q03690 1277 aaKnown RBP4.39□□□□□ -1.71
SPB4YFL002C ENT4Q07872 247 aa4.39□□□□□ -1.71
SPB4YFL002C CTI6Q08923 506 aa4.39□□□□□ -1.71
SPB4YFL002C YCK1P23291 538 aa4.39□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 14.9 ms