RNA–Protein interactions for RNA: YER151C

UBP3, Transcript of Ubiquitin-specific protease involved in transport and osmotic response, yeastyeast

Gene UBP3, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP3YER151C REH1Q06709 432 aa1.2□□□□□ -2.22
UBP3YER151C IRC13Q08630 104 aa1.2□□□□□ -2.22
UBP3YER151C HRT3Q12347 344 aa1.2□□□□□ -2.22
UBP3YER151C CUP1-1P0CX80 61 aa1.2□□□□□ -2.22
UBP3YER151C CUP1-2P0CX81 61 aa1.2□□□□□ -2.22
UBP3YER151C LAT1P12695 482 aaKnown RBP1.2□□□□□ -2.22
UBP3YER151C ADE2P21264 571 aaKnown RBP1.2□□□□□ -2.22
UBP3YER151C KKQ8P36004 724 aa1.2□□□□□ -2.22
UBP3YER151C EMC3P36039 253 aa1.2□□□□□ -2.22
UBP3YER151C SLX1P38324 304 aa1.2□□□□□ -2.22
UBP3YER151C YHR078WP38799 552 aa1.2□□□□□ -2.22
UBP3YER151C YHR202WP38887 602 aa1.2□□□□□ -2.22
UBP3YER151C YEL020CP39994 560 aa1.2□□□□□ -2.22
UBP3YER151C FMP52P40008 231 aa1.2□□□□□ -2.22
UBP3YER151C VRG4P40107 337 aa1.2□□□□□ -2.22
UBP3YER151C MOB1P40484 314 aa1.2□□□□□ -2.22
UBP3YER151C PFA3P42836 336 aa1.2□□□□□ -2.22
UBP3YER151C ALG2P43636 503 aa1.2□□□□□ -2.22
UBP3YER151C STB2P46679 850 aa1.2□□□□□ -2.22
UBP3YER151C MDE1P47095 244 aa1.2□□□□□ -2.22
UBP3YER151C EAF6P47128 113 aa1.2□□□□□ -2.22
UBP3YER151C CCM1P48237 864 aaPredicted RBP1.2□□□□□ -2.22
UBP3YER151C APM1Q00776 475 aaPredicted RBP1.2□□□□□ -2.22
UBP3YER151C PRP42Q03776 544 aaKnown RBP1.2□□□□□ -2.22
UBP3YER151C ECM7Q06200 448 aa1.2□□□□□ -2.22
UBP3YER151C SPO75Q07798 868 aa1.2□□□□□ -2.22
UBP3YER151C SRO7Q12038 1033 aa1.2□□□□□ -2.22
UBP3YER151C DIN7Q12086 430 aa1.2□□□□□ -2.22
UBP3YER151C REX3Q12090 404 aa1.2□□□□□ -2.22
UBP3YER151C YLR149CQ99296 730 aa1.2□□□□□ -2.22
UBP3YER151C PYC1P11154 1178 aaKnown RBP1.19□□□□□ -2.22
UBP3YER151C SSB1P11484 613 aaKnown RBP1.19□□□□□ -2.22
UBP3YER151C KRE2P27809 442 aa1.19□□□□□ -2.22
UBP3YER151C MCM4P30665 933 aaKnown RBP1.19□□□□□ -2.22
UBP3YER151C HIR1P32479 840 aa1.19□□□□□ -2.22
UBP3YER151C ORC2P32833 620 aa1.19□□□□□ -2.22
UBP3YER151C MTC2P34246 357 aa1.19□□□□□ -2.22
UBP3YER151C GND1P38720 489 aaKnown RBP1.19□□□□□ -2.22
UBP3YER151C SAK1P38990 1142 aa1.19□□□□□ -2.22
UBP3YER151C SSB2P40150 613 aaKnown RBP1.19□□□□□ -2.22
UBP3YER151C NUP82P40368 713 aa1.19□□□□□ -2.22
UBP3YER151C YIR042CP40586 236 aa1.19□□□□□ -2.22
UBP3YER151C UBC11P52492 156 aa1.19□□□□□ -2.22
UBP3YER151C DSD1P53095 428 aa1.19□□□□□ -2.22
UBP3YER151C RSC3Q06639 885 aa1.19□□□□□ -2.22
UBP3YER151C RPL22AP05749 121 aaKnown RBP1.19□□□□□ -2.22
UBP3YER151C MPH2P0CD99 609 aa1.19□□□□□ -2.22
UBP3YER151C MTF1P14908 341 aaKnown RBP1.19□□□□□ -2.22
UBP3YER151C DMC1P25453 334 aa1.19□□□□□ -2.22
UBP3YER151C CDC11P32458 415 aa1.19□□□□□ -2.22
UBP3YER151C EUG1P32474 517 aa1.19□□□□□ -2.22
UBP3YER151C TIF5P38431 405 aaKnown RBP1.19□□□□□ -2.22
UBP3YER151C BCD1P38772 366 aa1.19□□□□□ -2.22
UBP3YER151C LYS9P38999 446 aa1.19□□□□□ -2.22
UBP3YER151C YTA12P40341 825 aa1.19□□□□□ -2.22
UBP3YER151C VMA13P41807 478 aaKnown RBP1.19□□□□□ -2.22
UBP3YER151C BUD27P43573 796 aaKnown RBP RIP-Chip data1.19□□□□□ -2.22not detected
UBP3YER151C SSY5P47002 699 aa1.19□□□□□ -2.22
UBP3YER151C BPL1P48445 690 aaPredicted RBP1.19□□□□□ -2.22
UBP3YER151C TEL2P53038 688 aa1.19□□□□□ -2.22
UBP3YER151C FLC3P53121 802 aa1.19□□□□□ -2.22
UBP3YER151C CNM67P53865 581 aaKnown RBP1.19□□□□□ -2.22
UBP3YER151C ADE16P54113 591 aaKnown RBP1.19□□□□□ -2.22
UBP3YER151C SSL2Q00578 843 aa1.19□□□□□ -2.22
UBP3YER151C VIP1Q06685 1146 aaKnown RBP1.19□□□□□ -2.22
UBP3YER151C OSW1Q08692 278 aa1.19□□□□□ -2.22
UBP3YER151C TGL5Q12043 749 aa1.19□□□□□ -2.22
UBP3YER151C OSH2Q12451 1283 aa1.19□□□□□ -2.22
UBP3YER151C YLR422WQ06409 1932 aa1.18□□□□□ -2.22
UBP3YER151C RPN13O13563 156 aa1.18□□□□□ -2.22
UBP3YER151C STI1P15705 589 aaKnown RBP RIP-Chip data1.18□□□□□ -2.22not detected
UBP3YER151C RFA1P22336 621 aaKnown RBP1.18□□□□□ -2.22
UBP3YER151C SPO11P23179 398 aa1.18□□□□□ -2.22
UBP3YER151C LDB16P25587 256 aa1.18□□□□□ -2.22
UBP3YER151C MKK1P32490 508 aa1.18□□□□□ -2.22
UBP3YER151C SRP40P32583 406 aaPredicted RBP1.18□□□□□ -2.22
UBP3YER151C YKL091CP33324 310 aaKnown RBP1.18□□□□□ -2.22
UBP3YER151C YKR051WP36142 418 aa1.18□□□□□ -2.22
UBP3YER151C RXT2P38255 430 aa1.18□□□□□ -2.22
UBP3YER151C OPY1P38271 328 aa1.18□□□□□ -2.22
UBP3YER151C ERC1P38767 581 aa1.18□□□□□ -2.22
UBP3YER151C YPT35P38815 214 aaKnown RBP1.18□□□□□ -2.22
UBP3YER151C HRB1P38922 454 aaKnown RBP RIP-Chip data1.18□□□□□ -2.22not detected
UBP3YER151C YJL206CP39529 758 aa1.18□□□□□ -2.22
UBP3YER151C UBX6P47049 396 aa1.18□□□□□ -2.22
UBP3YER151C HSV2P50079 448 aaPredicted RBP1.18□□□□□ -2.22
UBP3YER151C ATP25Q03153 612 aa1.18□□□□□ -2.22
UBP3YER151C VPS60Q03390 229 aa1.18□□□□□ -2.22
UBP3YER151C SEG1Q04279 960 aa1.18□□□□□ -2.22
UBP3YER151C AAD4Q07747 329 aa1.18□□□□□ -2.22
UBP3YER151C DDC1Q08949 612 aa1.18□□□□□ -2.22
UBP3YER151C ATG11Q12527 1178 aa1.18□□□□□ -2.22
UBP3YER151C PGA3Q12746 312 aaKnown RBP1.18□□□□□ -2.22
UBP3YER151C MDM12Q92328 271 aa1.18□□□□□ -2.22
UBP3YER151C MYO1P08964 1928 aa1.18□□□□□ -2.22
UBP3YER151C GAL1P04385 528 aa1.18□□□□□ -2.22
UBP3YER151C RPA135P22138 1203 aaKnown RBP1.18□□□□□ -2.22
UBP3YER151C VBA3P25594 458 aa1.18□□□□□ -2.22
UBP3YER151C MRPL37P36532 105 aa1.18□□□□□ -2.22
UBP3YER151C AAP1P37898 856 aaKnown RBP1.18□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 26.3 ms