RNA–Protein interactions for RNA: YEL031W

SPF1, Transcript of P-type ATPase, ion transporter of the ER membrane, yeastyeast

Gene SPF1, Length 3,648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPF1YEL031W CUR1Q06469 252 aa2.44□□□□□ -2.02
SPF1YEL031W SGO1Q08490 590 aa2.44□□□□□ -2.02
SPF1YEL031W RPN8Q08723 338 aaKnown RBP2.44□□□□□ -2.02
SPF1YEL031W YPR204WQ08995 1032 aa2.44□□□□□ -2.02
SPF1YEL031W NSL1Q12143 216 aa2.44□□□□□ -2.02
SPF1YEL031W MED11Q99278 115 aa2.44□□□□□ -2.02
SPF1YEL031W TRP2P00899 507 aaKnown RBP2.44□□□□□ -2.02
SPF1YEL031W GPA2P10823 449 aa2.44□□□□□ -2.02
SPF1YEL031W HMG1P12683 1054 aa2.44□□□□□ -2.02
SPF1YEL031W PUP1P25043 261 aa2.44□□□□□ -2.02
SPF1YEL031W SNT1P25357 1226 aa2.44□□□□□ -2.02
SPF1YEL031W TFB1P32776 642 aa2.44□□□□□ -2.02
SPF1YEL031W SRB2P34162 210 aa2.44□□□□□ -2.02
SPF1YEL031W TEF4P36008 412 aaKnown RBP2.44□□□□□ -2.02
SPF1YEL031W DCW1P36091 449 aa2.44□□□□□ -2.02
SPF1YEL031W DIA4P38705 446 aaPredicted RBP2.44□□□□□ -2.02
SPF1YEL031W SBE2P42223 864 aaKnown RBP2.44□□□□□ -2.02
SPF1YEL031W JJJ2P46997 583 aa2.44□□□□□ -2.02
SPF1YEL031W YML6P51998 286 aa2.44□□□□□ -2.02
SPF1YEL031W PAN2P53010 1115 aaPredicted RBP2.44□□□□□ -2.02
SPF1YEL031W YGR111WP53265 400 aa2.44□□□□□ -2.02
SPF1YEL031W SED5Q01590 340 aa2.44□□□□□ -2.02
SPF1YEL031W OSH6Q02201 448 aa2.44□□□□□ -2.02
SPF1YEL031W BUL2Q03758 920 aaKnown RBP2.44□□□□□ -2.02
SPF1YEL031W TVP15Q03860 143 aa2.44□□□□□ -2.02
SPF1YEL031W PRM6Q04705 352 aa2.44□□□□□ -2.02
SPF1YEL031W NNT1Q05874 261 aa2.44□□□□□ -2.02
SPF1YEL031W DIB1Q06819 143 aaPredicted RBP2.44□□□□□ -2.02
SPF1YEL031W GRE2Q12068 342 aaKnown RBP2.44□□□□□ -2.02
SPF1YEL031W MED2Q12124 431 aa2.44□□□□□ -2.02
SPF1YEL031W TY3A-GQ12173 290 aa2.44□□□□□ -2.02
SPF1YEL031W YOR214CQ12282 236 aa2.44□□□□□ -2.02
SPF1YEL031W TY3A-IQ99219 290 aa2.44□□□□□ -2.02
SPF1YEL031W VCX1Q99385 411 aa2.44□□□□□ -2.02
SPF1YEL031W YLR278CQ05854 1341 aa2.44□□□□□ -2.02
SPF1YEL031W RPS3P05750 240 aaKnown RBP2.43□□□□□ -2.02
SPF1YEL031W WHI2P12611 486 aa2.43□□□□□ -2.02
SPF1YEL031W SKG6P32900 734 aaPredicted RBP2.43□□□□□ -2.02
SPF1YEL031W STV1P37296 890 aa2.43□□□□□ -2.02
SPF1YEL031W MAK5P38112 773 aaPredicted RBP2.43□□□□□ -2.02
SPF1YEL031W UBP13P38187 747 aa2.43□□□□□ -2.02
SPF1YEL031W PCA1P38360 1216 aa2.43□□□□□ -2.02
SPF1YEL031W ERG7P38604 731 aa2.43□□□□□ -2.02
SPF1YEL031W YHR112CP38716 378 aa2.43□□□□□ -2.02
SPF1YEL031W ORC6P38826 435 aa2.43□□□□□ -2.02
SPF1YEL031W SEC31P38968 1273 aaKnown RBP2.43□□□□□ -2.02
SPF1YEL031W UTP18P40362 594 aaPredicted RBP2.43□□□□□ -2.02
SPF1YEL031W SET4P42948 560 aa2.43□□□□□ -2.02
SPF1YEL031W FAR3P46671 204 aa2.43□□□□□ -2.02
SPF1YEL031W HEH2Q03281 663 aa2.43□□□□□ -2.02
SPF1YEL031W ARP10Q04549 284 aa2.43□□□□□ -2.02
SPF1YEL031W CDC73Q06697 393 aa2.43□□□□□ -2.02
SPF1YEL031W CDA1Q06702 301 aa2.43□□□□□ -2.02
SPF1YEL031W BRE4Q07660 1125 aa2.43□□□□□ -2.02
SPF1YEL031W FEX1Q08913 375 aa2.43□□□□□ -2.02
SPF1YEL031W YPR202WQ08993 238 aa2.43□□□□□ -2.02
SPF1YEL031W HAT1Q12341 374 aa2.43□□□□□ -2.02
SPF1YEL031W SNU23Q12368 194 aaPredicted RBP2.43□□□□□ -2.02
SPF1YEL031W SKM1Q12469 655 aa2.43□□□□□ -2.02
SPF1YEL031W LAG2Q92325 660 aa2.43□□□□□ -2.02
SPF1YEL031W HSH49Q99181 213 aaPredicted RBP2.43□□□□□ -2.02
SPF1YEL031W PDE2P06776 526 aa2.43□□□□□ -2.02
SPF1YEL031W MSS18P08593 268 aa2.43□□□□□ -2.02
SPF1YEL031W RAD18P10862 487 aa2.43□□□□□ -2.02
SPF1YEL031W NPP1P25353 742 aa2.43□□□□□ -2.02
SPF1YEL031W ADY2P25613 283 aa2.43□□□□□ -2.02
SPF1YEL031W PWP2P25635 923 aaKnown RBP2.43□□□□□ -2.02
SPF1YEL031W CPR3P25719 182 aa2.43□□□□□ -2.02
SPF1YEL031W RAD14P28519 371 aa2.43□□□□□ -2.02
SPF1YEL031W RTG2P32608 588 aaKnown RBP2.43□□□□□ -2.02
SPF1YEL031W NIC96P34077 839 aa2.43□□□□□ -2.02
SPF1YEL031W TOM20P35180 183 aa2.43□□□□□ -2.02
SPF1YEL031W MSR1P38714 643 aa2.43□□□□□ -2.02
SPF1YEL031W BFR1P38934 470 aaKnown RBP RIP-Chip data2.43□□□□□ -2.02 RIP-Chip
SPF1YEL031W DDI1P40087 428 aa2.43□□□□□ -2.02
SPF1YEL031W SWM2P40342 146 aa2.43□□□□□ -2.02
SPF1YEL031W MON1P53129 644 aa2.43□□□□□ -2.02
SPF1YEL031W GET1P53192 235 aa2.43□□□□□ -2.02
SPF1YEL031W UBX4P54730 416 aa2.43□□□□□ -2.02
SPF1YEL031W DIG1Q03063 452 aaKnown RBP2.43□□□□□ -2.02
SPF1YEL031W ECM11Q04110 302 aa2.43□□□□□ -2.02
SPF1YEL031W TAF11Q04226 346 aa2.43□□□□□ -2.02
SPF1YEL031W GMC2Q06201 188 aa2.43□□□□□ -2.02
SPF1YEL031W JIP5Q06214 492 aaPredicted RBP2.43□□□□□ -2.02
SPF1YEL031W SMD2Q06217 110 aaKnown RBP2.43□□□□□ -2.02
SPF1YEL031W MDM36Q06820 579 aa2.43□□□□□ -2.02
SPF1YEL031W RCN2Q12044 265 aa2.43□□□□□ -2.02
SPF1YEL031W ARP6Q12509 438 aa2.43□□□□□ -2.02
SPF1YEL031W YEL077CQ3E7X8 1277 aa2.43□□□□□ -2.02
SPF1YEL031W PHO8P11491 566 aa2.43□□□□□ -2.02
SPF1YEL031W TEC1P18412 486 aa2.43□□□□□ -2.02
SPF1YEL031W CLN2P20438 545 aa2.43□□□□□ -2.02
SPF1YEL031W RIT1P23796 513 aa2.43□□□□□ -2.02
SPF1YEL031W PHO84P25297 587 aaKnown RBP2.43□□□□□ -2.02
SPF1YEL031W RIM1P32445 135 aaKnown RBP2.43□□□□□ -2.02
SPF1YEL031W ABD1P32783 436 aaPredicted RBP2.43□□□□□ -2.02
SPF1YEL031W GDH2P33327 1092 aaKnown RBP2.43□□□□□ -2.02
SPF1YEL031W SOL3P38858 249 aa2.43□□□□□ -2.02
SPF1YEL031W MPT5P39016 859 aaKnown RBP RIP-Chip data2.43□□□□□ -2.02not detected
SPF1YEL031W SWD1P39706 426 aa2.43□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms