RNA–Protein interactions for RNA: YDR498C

SEC20, Transcript of Membrane glycoprotein v-SNARE, yeastyeast

Gene SEC20, Length 1,152 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC20YDR498C IMA3P0CW40 589 aa5.93□□□□□ -1.46
SEC20YDR498C IMA4P0CW41 589 aa5.93□□□□□ -1.46
SEC20YDR498C CLB1P24868 471 aa5.93□□□□□ -1.46
SEC20YDR498C GAC1P28006 793 aa5.93□□□□□ -1.46
SEC20YDR498C UTR2P32623 467 aa5.93□□□□□ -1.46
SEC20YDR498C SLD2P34252 453 aa5.93□□□□□ -1.46
SEC20YDR498C UIP5P36137 443 aa5.93□□□□□ -1.46
SEC20YDR498C YBR056WP38081 501 aa5.93□□□□□ -1.46
SEC20YDR498C YSW1P38280 609 aa5.93□□□□□ -1.46
SEC20YDR498C SMF2P38778 549 aa5.93□□□□□ -1.46
SEC20YDR498C SPC97P38863 823 aa5.93□□□□□ -1.46
SEC20YDR498C ECM1P39715 212 aa5.93□□□□□ -1.46
SEC20YDR498C ALD5P40047 520 aaKnown RBP5.93□□□□□ -1.46
SEC20YDR498C YJL107CP42947 387 aa5.93□□□□□ -1.46
SEC20YDR498C RGD2P43556 714 aa5.93□□□□□ -1.46
SEC20YDR498C SAE2P46946 345 aa5.93□□□□□ -1.46
SEC20YDR498C VPS62P53285 467 aa5.93□□□□□ -1.46
SEC20YDR498C NOP13P53883 403 aaKnown RBP RIP-Chip data5.93□□□□□ -1.46not detected
SEC20YDR498C YNL144CP53907 740 aa5.93□□□□□ -1.46
SEC20YDR498C DMA2P53924 522 aa5.93□□□□□ -1.46
SEC20YDR498C YNL108CP53929 270 aa5.93□□□□□ -1.46
SEC20YDR498C COG6P53959 839 aa5.93□□□□□ -1.46
SEC20YDR498C RCR2Q03446 210 aaKnown RBP5.93□□□□□ -1.46
SEC20YDR498C YDR338CQ05497 695 aa5.93□□□□□ -1.46
SEC20YDR498C ADE13Q05911 482 aaKnown RBP5.93□□□□□ -1.46
SEC20YDR498C IMA2Q08295 589 aa5.93□□□□□ -1.46
SEC20YDR498C DDC1Q08949 612 aa5.93□□□□□ -1.46
SEC20YDR498C PUF2Q12221 1075 aaKnown RBP RIP-Chip data5.93□□□□□ -1.46not detected
SEC20YDR498C SLP1Q12232 587 aa5.93□□□□□ -1.46
SEC20YDR498C VPS5Q92331 675 aa5.93□□□□□ -1.46
SEC20YDR498C CDC4P07834 779 aa5.92□□□□□ -1.46
SEC20YDR498C YPK1P12688 680 aaKnown RBP5.92□□□□□ -1.46
SEC20YDR498C LRE1P25579 583 aaKnown RBP5.92□□□□□ -1.46
SEC20YDR498C KAR4P25583 335 aa5.92□□□□□ -1.46
SEC20YDR498C URA7P28274 579 aaKnown RBP5.92□□□□□ -1.46
SEC20YDR498C PMI40P29952 429 aaKnown RBP5.92□□□□□ -1.46
SEC20YDR498C MLS1P30952 554 aa5.92□□□□□ -1.46
SEC20YDR498C BIO2P32451 375 aa5.92□□□□□ -1.46
SEC20YDR498C BUD2P33314 1104 aa5.92□□□□□ -1.46
SEC20YDR498C ETR1P38071 380 aa5.92□□□□□ -1.46
SEC20YDR498C YBR053CP38235 358 aa5.92□□□□□ -1.46
SEC20YDR498C MED8P38304 223 aa5.92□□□□□ -1.46
SEC20YDR498C SLX1P38324 304 aa5.92□□□□□ -1.46
SEC20YDR498C LYS9P38999 446 aa5.92□□□□□ -1.46
SEC20YDR498C FHL1P39521 936 aa5.92□□□□□ -1.46
SEC20YDR498C SCC4P40090 624 aa5.92□□□□□ -1.46
SEC20YDR498C HLJ1P48353 224 aa5.92□□□□□ -1.46
SEC20YDR498C GND2P53319 492 aa5.92□□□□□ -1.46
SEC20YDR498C SLT2Q00772 484 aa5.92□□□□□ -1.46
SEC20YDR498C TIF35Q04067 274 aaKnown RBP5.92□□□□□ -1.46
SEC20YDR498C SLD7Q08457 257 aa5.92□□□□□ -1.46
SEC20YDR498C THI21Q08975 551 aa5.92□□□□□ -1.46
SEC20YDR498C LCB4Q12246 624 aa5.92□□□□□ -1.46
SEC20YDR498C PAB1P04147 577 aaKnown RBP RIP-Chip data5.91□□□□□ -1.46not detected
SEC20YDR498C ILS1P09436 1072 aaKnown RBP5.91□□□□□ -1.46
SEC20YDR498C SSC1P0CS90 654 aaKnown RBP5.91□□□□□ -1.46
SEC20YDR498C CDC10P25342 322 aaKnown RBP5.91□□□□□ -1.46
SEC20YDR498C GID7P25569 745 aa5.91□□□□□ -1.46
SEC20YDR498C VAC17P25591 423 aa5.91□□□□□ -1.46
SEC20YDR498C YSC84P32793 468 aa5.91□□□□□ -1.46
SEC20YDR498C GCS1P35197 352 aa5.91□□□□□ -1.46
SEC20YDR498C PPE1P38796 400 aa5.91□□□□□ -1.46
SEC20YDR498C AIM18P38884 321 aa5.91□□□□□ -1.46
SEC20YDR498C CKB2P38930 258 aa5.91□□□□□ -1.46
SEC20YDR498C ATM1P40416 690 aa5.91□□□□□ -1.46
SEC20YDR498C CDC1P40986 491 aa5.91□□□□□ -1.46
SEC20YDR498C EMW1P42842 904 aaKnown RBP5.91□□□□□ -1.46
SEC20YDR498C CCT8P47079 568 aaKnown RBP5.91□□□□□ -1.46
SEC20YDR498C RFX1P48743 811 aa5.91□□□□□ -1.46
SEC20YDR498C YGR035CP53222 116 aa5.91□□□□□ -1.46
SEC20YDR498C BIO4P53630 237 aa5.91□□□□□ -1.46
SEC20YDR498C SUB1P54000 292 aaKnown RBP5.91□□□□□ -1.46
SEC20YDR498C KTR6P54070 446 aa5.91□□□□□ -1.46
SEC20YDR498C RKM2Q03942 479 aa5.91□□□□□ -1.46
SEC20YDR498C ARA2Q04212 335 aa5.91□□□□□ -1.46
SEC20YDR498C ARP9Q05123 467 aa5.91□□□□□ -1.46
SEC20YDR498C HRD3Q05787 833 aa5.91□□□□□ -1.46
SEC20YDR498C YET3Q07451 203 aa5.91□□□□□ -1.46
SEC20YDR498C NOB1Q08444 459 aaKnown RBP5.91□□□□□ -1.46
SEC20YDR498C CIR2Q08822 631 aa5.91□□□□□ -1.46
SEC20YDR498C CBC2Q08920 208 aaKnown RBP RIP-Chip data5.91□□□□□ -1.46not detected
SEC20YDR498C YLL056CQ12177 298 aa5.91□□□□□ -1.46
SEC20YDR498C REC8Q12188 680 aa5.91□□□□□ -1.46
SEC20YDR498C PKH2Q12236 1081 aaKnown RBP5.91□□□□□ -1.46
SEC20YDR498C APM4Q99186 491 aa5.91□□□□□ -1.46
SEC20YDR498C AI5_ALPHAQ9ZZX1 630 aa5.91□□□□□ -1.46
SEC20YDR498C TIF1P10081 395 aaKnown RBP5.9□□□□□ -1.46
SEC20YDR498C PMR1P13586 950 aa5.9□□□□□ -1.46
SEC20YDR498C TEC1P18412 486 aa5.9□□□□□ -1.46
SEC20YDR498C ARG1P22768 420 aa5.9□□□□□ -1.46
SEC20YDR498C FUB1P25659 250 aa5.9□□□□□ -1.46
SEC20YDR498C NIP1P32497 812 aaKnown RBP5.9□□□□□ -1.46
SEC20YDR498C SRP101P32916 621 aa5.9□□□□□ -1.46
SEC20YDR498C TKL2P33315 681 aa5.9□□□□□ -1.46
SEC20YDR498C HSP78P33416 811 aa5.9□□□□□ -1.46
SEC20YDR498C LOS1P33418 1100 aaPredicted RBP5.9□□□□□ -1.46
SEC20YDR498C RPC37P36121 282 aa5.9□□□□□ -1.46
SEC20YDR498C DIA4P38705 446 aaPredicted RBP5.9□□□□□ -1.46
SEC20YDR498C YDR089WP38966 869 aa5.9□□□□□ -1.46
SEC20YDR498C ESL1P40456 1118 aa5.9□□□□□ -1.46
Retrieved 100 of 5,963 RNA–protein pairs in 11.2 ms