RNA–Protein interactions for RNA: YDR378C

LSM6, Transcript of Lsm (Like Sm) protein, yeastyeast

Gene LSM6, Length 261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSM6YDR378C COS12P53053 380 aa5.7□□□□□ -1.5
LSM6YDR378C APA1P16550 321 aaKnown RBP5.69□□□□□ -1.5
LSM6YDR378C SIR1P21691 654 aa5.69□□□□□ -1.5
LSM6YDR378C MSM1P22438 575 aa5.69□□□□□ -1.5
LSM6YDR378C DPB3P27344 201 aa5.69□□□□□ -1.5
LSM6YDR378C DBF20P32328 564 aa5.69□□□□□ -1.5
LSM6YDR378C YMC2P38087 329 aa5.69□□□□□ -1.5
LSM6YDR378C FUI1P38196 639 aa5.69□□□□□ -1.5
LSM6YDR378C VPS73P53142 486 aaKnown RBP5.69□□□□□ -1.5
LSM6YDR378C YGR021WP53212 290 aa5.69□□□□□ -1.5
LSM6YDR378C USA1Q03714 838 aa5.69□□□□□ -1.5
LSM6YDR378C ARA2Q04212 335 aa5.69□□□□□ -1.5
LSM6YDR378C IWR1Q07532 353 aaPredicted RBP5.69□□□□□ -1.5
LSM6YDR378C RPS7AP26786 190 aaKnown RBP5.68□□□□□ -1.5
LSM6YDR378C PRP45P28004 379 aaPredicted RBP5.68□□□□□ -1.5
LSM6YDR378C SPC72P39723 622 aa5.68□□□□□ -1.5
LSM6YDR378C CAB2P40506 365 aa5.68□□□□□ -1.5
LSM6YDR378C CPR6P53691 371 aaKnown RBP5.68□□□□□ -1.5
LSM6YDR378C PSR2Q07949 397 aa5.68□□□□□ -1.5
LSM6YDR378C RPN13O13563 156 aa5.67□□□□□ -1.5
LSM6YDR378C TDP1P38319 544 aa5.67□□□□□ -1.5
LSM6YDR378C IES5P40060 125 aa5.67□□□□□ -1.5
LSM6YDR378C BLS1Q06071 122 aa5.67□□□□□ -1.5
LSM6YDR378C MSL5Q12186 476 aaKnown RBP RIP-Chip data5.67□□□□□ -1.5not detected
LSM6YDR378C ZPS1Q12512 249 aa5.67□□□□□ -1.5
LSM6YDR378C TRX2P22803 104 aaKnown RBP5.66□□□□□ -1.5
LSM6YDR378C PRE2P30656 287 aaKnown RBP5.66□□□□□ -1.5
LSM6YDR378C SDH8P38345 138 aa5.66□□□□□ -1.5
LSM6YDR378C MUP3P38734 546 aa5.66□□□□□ -1.5
LSM6YDR378C MIT1P40002 666 aa5.66□□□□□ -1.5
LSM6YDR378C RPT2P40327 437 aaKnown RBP5.66□□□□□ -1.5
LSM6YDR378C YIL166CP40445 542 aa5.66□□□□□ -1.5
LSM6YDR378C SAP185P40856 1058 aa5.66□□□□□ -1.5
LSM6YDR378C RPS15Q01855 142 aaKnown RBP5.66□□□□□ -1.5
LSM6YDR378C ATG21Q02887 496 aa5.66□□□□□ -1.5
LSM6YDR378C GFD1Q04839 188 aaKnown RBP5.66□□□□□ -1.5
LSM6YDR378C EIS1Q05050 843 aaKnown RBP5.66□□□□□ -1.5
LSM6YDR378C TPK2P06245 380 aa5.65□□□□□ -1.5
LSM6YDR378C WHI2P12611 486 aa5.65□□□□□ -1.5
LSM6YDR378C YPK1P12688 680 aaKnown RBP5.65□□□□□ -1.5
LSM6YDR378C STE12P13574 688 aa5.65□□□□□ -1.5
LSM6YDR378C CLB4P24871 460 aa5.65□□□□□ -1.5
LSM6YDR378C FRD1P32614 470 aaKnown RBP5.65□□□□□ -1.5
LSM6YDR378C LNP1P38878 278 aa5.65□□□□□ -1.5
LSM6YDR378C COQ6P53318 479 aa5.65□□□□□ -1.5
LSM6YDR378C ADE3P07245 946 aaKnown RBP5.64□□□□□ -1.51
LSM6YDR378C RPA135P22138 1203 aaKnown RBP5.64□□□□□ -1.51
LSM6YDR378C SPO11P23179 398 aa5.64□□□□□ -1.51
LSM6YDR378C RIT1P23796 513 aa5.64□□□□□ -1.51
LSM6YDR378C MRPL36P36531 177 aa5.64□□□□□ -1.51
LSM6YDR378C PUG1P40100 303 aa5.64□□□□□ -1.51
LSM6YDR378C QRI1P43123 477 aaKnown RBP5.64□□□□□ -1.51
LSM6YDR378C ASN1P49089 572 aaKnown RBP5.64□□□□□ -1.51
LSM6YDR378C CPR8P53728 308 aa5.64□□□□□ -1.51
LSM6YDR378C APM1Q00776 475 aaPredicted RBP5.64□□□□□ -1.51
LSM6YDR378C YPL108WQ02872 168 aaPredicted RBP5.64□□□□□ -1.51
LSM6YDR378C AIM6Q07716 390 aa5.64□□□□□ -1.51
LSM6YDR378C TOP1P04786 769 aa5.63□□□□□ -1.51
LSM6YDR378C NUC1P08466 329 aa5.63□□□□□ -1.51
LSM6YDR378C SWC3P31376 625 aa5.63□□□□□ -1.51
LSM6YDR378C CDC5P32562 705 aa5.63□□□□□ -1.51
LSM6YDR378C YEL020CP39994 560 aa5.63□□□□□ -1.51
LSM6YDR378C SAP4P53036 818 aa5.63□□□□□ -1.51
LSM6YDR378C ICL2Q12031 575 aa5.63□□□□□ -1.51
LSM6YDR378C CPA2P03965 1118 aaKnown RBP5.62□□□□□ -1.51
LSM6YDR378C AAC1P04710 309 aa5.62□□□□□ -1.51
LSM6YDR378C SWI4P25302 1093 aaKnown RBP5.62□□□□□ -1.51
LSM6YDR378C SAT4P25333 603 aaKnown RBP5.62□□□□□ -1.51
LSM6YDR378C YCR061WP25639 631 aa5.62□□□□□ -1.51
LSM6YDR378C MRPL9P31334 269 aa5.62□□□□□ -1.51
LSM6YDR378C EMP70P32802 667 aa5.62□□□□□ -1.51
LSM6YDR378C YPT10P38146 199 aa5.62□□□□□ -1.51
LSM6YDR378C ARB1P40024 610 aaKnown RBP5.62□□□□□ -1.51
LSM6YDR378C PSF2P40359 213 aa5.62□□□□□ -1.51
LSM6YDR378C YGL117WP53133 265 aa5.62□□□□□ -1.51
LSM6YDR378C MRPL13Q02204 264 aa5.62□□□□□ -1.51
LSM6YDR378C CRF1Q04930 467 aa5.62□□□□□ -1.51
LSM6YDR378C CRT10Q08226 957 aa5.62□□□□□ -1.51
LSM6YDR378C RNR3P21672 869 aaKnown RBP5.61□□□□□ -1.51
LSM6YDR378C UGP1P32861 499 aaKnown RBP5.61□□□□□ -1.51
LSM6YDR378C SSM4P40318 1319 aa5.61□□□□□ -1.51
LSM6YDR378C ERR3P42222 437 aa5.61□□□□□ -1.51
LSM6YDR378C ESF2P53743 316 aaKnown RBP5.61□□□□□ -1.51
LSM6YDR378C ARP2P32381 391 aaKnown RBP5.6□□□□□ -1.51
LSM6YDR378C GCD7P32502 381 aaPredicted RBP5.6□□□□□ -1.51
LSM6YDR378C FSH1P38777 243 aaKnown RBP5.6□□□□□ -1.51
LSM6YDR378C SMK1P41808 388 aa5.6□□□□□ -1.51
LSM6YDR378C IMA1P53051 589 aa5.6□□□□□ -1.51
LSM6YDR378C GIS1Q03833 894 aa5.6□□□□□ -1.51
LSM6YDR378C CIA1Q05583 330 aa5.6□□□□□ -1.51
LSM6YDR378C YER175W-AQ8TGU4 54 aa5.6□□□□□ -1.51
LSM6YDR378C YCL049CP25577 312 aa5.59□□□□□ -1.51
LSM6YDR378C XRS2P33301 854 aa5.59□□□□□ -1.51
LSM6YDR378C YBR138CP38277 524 aa5.59□□□□□ -1.51
LSM6YDR378C NPR3P38742 1146 aa5.59□□□□□ -1.51
LSM6YDR378C MTG2P38860 518 aa5.59□□□□□ -1.51
LSM6YDR378C LAS21P40367 830 aa5.59□□□□□ -1.51
LSM6YDR378C SKP2P42843 763 aa5.59□□□□□ -1.51
LSM6YDR378C IML2P47031 731 aa5.59□□□□□ -1.51
LSM6YDR378C MRK1P50873 501 aa5.59□□□□□ -1.51
Retrieved 100 of 5,963 RNA–protein pairs in 10.7 ms