RNA–Protein interactions for RNA: YDR320C

SWA2, Transcript of Auxilin-like protein involved in vesicular transport, yeast

Gene SWA2, Length 2,007 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SWA2	YDR320C	NNF2	P53253	936 aa		2.59	□□□□□ -2
SWA2	YDR320C	YGR283C	P53336	341 aa	Predicted RBP	2.59	□□□□□ -2
SWA2	YDR320C	SNF12	P53628	566 aa		2.59	□□□□□ -2
SWA2	YDR320C	YNR061C	P53747	219 aa		2.59	□□□□□ -2
SWA2	YDR320C	TIM50	Q02776	476 aa		2.59	□□□□□ -2
SWA2	YDR320C	YML119W	Q03208	357 aa		2.59	□□□□□ -2
SWA2	YDR320C	RBA50	Q04418	439 aa		2.59	□□□□□ -2
SWA2	YDR320C	TMN2	Q04562	672 aa		2.59	□□□□□ -2
SWA2	YDR320C	ATG38	Q05789	226 aa	Known RBP	2.59	□□□□□ -2
SWA2	YDR320C	RSC3	Q06639	885 aa		2.59	□□□□□ -2
SWA2	YDR320C	TGL5	Q12043	749 aa		2.59	□□□□□ -2
SWA2	YDR320C	RTN2	Q12443	393 aa		2.59	□□□□□ -2
SWA2	YDR320C	RPS21B	Q3E754	87 aa	Known RBP	2.59	□□□□□ -2
SWA2	YDR320C	ARG3	P05150	338 aa		2.58	□□□□□ -2
SWA2	YDR320C	FUM1	P08417	488 aa	Known RBP	2.58	□□□□□ -2
SWA2	YDR320C	MER1	P16523	270 aa		2.58	□□□□□ -2
SWA2	YDR320C	PRP28	P23394	588 aa		2.58	□□□□□ -2
SWA2	YDR320C	EFT1	P32324	842 aa	Known RBP	2.58	□□□□□ -2
SWA2	YDR320C	RME1	P32338	300 aa	Known RBP	2.58	□□□□□ -2
SWA2	YDR320C	SMY1	P32364	656 aa	Known RBP	2.58	□□□□□ -2
SWA2	YDR320C	GYP6	P32806	458 aa		2.58	□□□□□ -2
SWA2	YDR320C	MRE11	P32829	692 aa		2.58	□□□□□ -2
SWA2	YDR320C	SLC1	P33333	303 aa		2.58	□□□□□ -2
SWA2	YDR320C	OAF3	P36023	863 aa		2.58	□□□□□ -2
SWA2	YDR320C	LAS1	P36146	502 aa	Predicted RBP	2.58	□□□□□ -2
SWA2	YDR320C	ERT1	P38140	529 aa		2.58	□□□□□ -2
SWA2	YDR320C	HSL7	P38274	827 aa		2.58	□□□□□ -2
SWA2	YDR320C	FUN12	P39730	1002 aa	Known RBP	2.58	□□□□□ -2
SWA2	YDR320C	STL1	P39932	569 aa		2.58	□□□□□ -2
SWA2	YDR320C	KHA1	P40309	873 aa		2.58	□□□□□ -2
SWA2	YDR320C	MPH1	P40562	993 aa		2.58	□□□□□ -2
SWA2	YDR320C	BUD27	P43573	796 aa	Known RBP RIP-Chip data	2.58	□□□□□ -2	not detected
SWA2	YDR320C	ASK10	P48361	1146 aa		2.58	□□□□□ -2
SWA2	YDR320C	LYS4	P49367	693 aa	Predicted RBP	2.58	□□□□□ -2
SWA2	YDR320C	CTF18	P49956	741 aa		2.58	□□□□□ -2
SWA2	YDR320C	SGF73	P53165	657 aa		2.58	□□□□□ -2
SWA2	YDR320C	LSB1	P53281	241 aa		2.58	□□□□□ -2
SWA2	YDR320C	TOF1	P53840	1238 aa		2.58	□□□□□ -2
SWA2	YDR320C	CBK1	P53894	756 aa		2.58	□□□□□ -2
SWA2	YDR320C	RRN5	Q02983	363 aa		2.58	□□□□□ -2
SWA2	YDR320C	TAP42	Q04372	366 aa		2.58	□□□□□ -2
SWA2	YDR320C	LCD1	Q04377	747 aa		2.58	□□□□□ -2
SWA2	YDR320C	GTB1	Q04924	702 aa		2.58	□□□□□ -2
SWA2	YDR320C	MRD1	Q06106	887 aa	Known RBP	2.58	□□□□□ -2
SWA2	YDR320C	CSR1	Q06705	408 aa	Known RBP	2.58	□□□□□ -2
SWA2	YDR320C	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	2.58	□□□□□ -2	not detected
SWA2	YDR320C	YLR040C	Q07988	224 aa		2.58	□□□□□ -2
SWA2	YDR320C	MCH5	Q08777	521 aa		2.58	□□□□□ -2
SWA2	YDR320C	GUP2	Q08929	609 aa		2.58	□□□□□ -2
SWA2	YDR320C	PCL8	Q08966	492 aa		2.58	□□□□□ -2
SWA2	YDR320C	APL4	Q12028	832 aa		2.58	□□□□□ -2
SWA2	YDR320C	YPR027C	Q12079	277 aa		2.58	□□□□□ -2
SWA2	YDR320C	PSY3	Q12318	242 aa		2.58	□□□□□ -2
SWA2	YDR320C	PDH1	Q12428	516 aa	Known RBP	2.58	□□□□□ -2
SWA2	YDR320C	YOL159C-A	Q3E769	90 aa		2.58	□□□□□ -2
SWA2	YDR320C	ECM5	Q03214	1411 aa		2.58	□□□□□ -2
SWA2	YDR320C	LEU2	P04173	364 aa	Predicted RBP	2.58	□□□□□ -2
SWA2	YDR320C	CTT1	P06115	562 aa		2.58	□□□□□ -2
SWA2	YDR320C	RPB2	P08518	1224 aa	Known RBP	2.58	□□□□□ -2
SWA2	YDR320C	RPL19A	P0CX82	189 aa	Known RBP	2.58	□□□□□ -2
SWA2	YDR320C	RPL19B	P0CX83	189 aa	Predicted RBP	2.58	□□□□□ -2
SWA2	YDR320C	LAT1	P12695	482 aa	Known RBP	2.58	□□□□□ -2
SWA2	YDR320C	PFK2	P16862	959 aa	Known RBP RIP-Chip data	2.58	□□□□□ -2	not detected
SWA2	YDR320C	DBP5	P20449	482 aa	Known RBP	2.58	□□□□□ -2
SWA2	YDR320C	SPB1	P25582	841 aa	Predicted RBP	2.58	□□□□□ -2
SWA2	YDR320C	RPN2	P32565	945 aa	Known RBP	2.58	□□□□□ -2
SWA2	YDR320C	STE13	P33894	931 aa		2.58	□□□□□ -2
SWA2	YDR320C	YKL107W	P34251	309 aa		2.58	□□□□□ -2
SWA2	YDR320C	TAF5	P38129	798 aa		2.58	□□□□□ -2
SWA2	YDR320C	PEX32	P38292	413 aa		2.58	□□□□□ -2
SWA2	YDR320C	PEX18	P38855	283 aa		2.58	□□□□□ -2
SWA2	YDR320C	YHR202W	P38887	602 aa		2.58	□□□□□ -2
SWA2	YDR320C	TIF4631	P39935	952 aa	Known RBP	2.58	□□□□□ -2
SWA2	YDR320C	MRX1	P40050	688 aa		2.58	□□□□□ -2
SWA2	YDR320C	OSW5	P40219	148 aa		2.58	□□□□□ -2
SWA2	YDR320C	MKT1	P40850	830 aa	Known RBP	2.58	□□□□□ -2
SWA2	YDR320C	LCB2	P40970	561 aa		2.58	□□□□□ -2
SWA2	YDR320C	CCT7	P42943	550 aa	Known RBP	2.58	□□□□□ -2
SWA2	YDR320C	SIP4	P46954	829 aa		2.58	□□□□□ -2
SWA2	YDR320C	HOP2	P53187	214 aa		2.58	□□□□□ -2
SWA2	YDR320C	OAZ1	Q02803	292 aa		2.58	□□□□□ -2
SWA2	YDR320C	ATP25	Q03153	612 aa		2.58	□□□□□ -2
SWA2	YDR320C	RMT2	Q03305	412 aa		2.58	□□□□□ -2
SWA2	YDR320C	YMR111C	Q04461	462 aa	Predicted RBP	2.58	□□□□□ -2
SWA2	YDR320C	ECM22	Q05958	814 aa	Predicted RBP	2.58	□□□□□ -2
SWA2	YDR320C	MCP2	Q06567	569 aa		2.58	□□□□□ -2
SWA2	YDR320C	IRC10	Q08118	586 aa		2.58	□□□□□ -2
SWA2	YDR320C	YOL073C	Q08232	322 aa		2.58	□□□□□ -2
SWA2	YDR320C	CIR2	Q08822	631 aa		2.58	□□□□□ -2
SWA2	YDR320C	NDJ1	Q12366	352 aa		2.58	□□□□□ -2
SWA2	YDR320C	SFI1	Q12369	946 aa		2.58	□□□□□ -2
SWA2	YDR320C	GRX6	Q12438	231 aa		2.58	□□□□□ -2
SWA2	YDR320C	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	2.58	□□□□□ -2	not detected
SWA2	YDR320C	ISN1	Q99312	450 aa		2.58	□□□□□ -2
SWA2	YDR320C	ENA1	P13587	1091 aa		2.57	□□□□□ -2
SWA2	YDR320C	SYP1	P25623	870 aa	Known RBP	2.57	□□□□□ -2
SWA2	YDR320C	YJU2	P28320	278 aa	Predicted RBP	2.57	□□□□□ -2
SWA2	YDR320C	NGG1	P32494	702 aa		2.57	□□□□□ -2
SWA2	YDR320C	VPS17	P32913	551 aa		2.57	□□□□□ -2
SWA2	YDR320C	RPT5	P33297	434 aa	Known RBP	2.57	□□□□□ -2

Retrieved 100 of 5,963 RNA–protein pairs in 10.6 ms