RNA–Protein interactions for RNA: YDL108W

KIN28, Transcript of Serine/threonine protein kinase, subunit of transcription factor TFIIH, yeast

Gene KIN28, Length 921 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
KIN28	YDL108W	YNL050C	P53952	270 aa		4.97	□□□□□ -1.61
KIN28	YDL108W	CTK1	Q03957	528 aa	Known RBP	4.97	□□□□□ -1.61
KIN28	YDL108W	YLR407W	Q06070	228 aa		4.97	□□□□□ -1.61
KIN28	YDL108W	HFI1	Q12060	488 aa		4.97	□□□□□ -1.61
KIN28	YDL108W	YPR027C	Q12079	277 aa		4.97	□□□□□ -1.61
KIN28	YDL108W	RRP36	Q12481	300 aa	Predicted RBP	4.97	□□□□□ -1.61
KIN28	YDL108W	SWI6	P09959	803 aa		4.96	□□□□□ -1.62
KIN28	YDL108W	RPS21A	P0C0V8	87 aa	Known RBP	4.96	□□□□□ -1.62
KIN28	YDL108W	KAR3	P17119	729 aa		4.96	□□□□□ -1.62
KIN28	YDL108W	ERG4	P25340	473 aa		4.96	□□□□□ -1.62
KIN28	YDL108W	IMG2	P25642	146 aa	Predicted RBP	4.96	□□□□□ -1.62
KIN28	YDL108W	PMI40	P29952	429 aa	Known RBP	4.96	□□□□□ -1.62
KIN28	YDL108W	DAL3	P32459	195 aa		4.96	□□□□□ -1.62
KIN28	YDL108W	TFB1	P32776	642 aa		4.96	□□□□□ -1.62
KIN28	YDL108W	TRM2	P33753	639 aa		4.96	□□□□□ -1.62
KIN28	YDL108W	HSM3	P38348	480 aa		4.96	□□□□□ -1.62
KIN28	YDL108W	YHR131C	P38835	850 aa		4.96	□□□□□ -1.62
KIN28	YDL108W	YMR124W	P39523	943 aa	Known RBP	4.96	□□□□□ -1.62
KIN28	YDL108W	GPP2	P40106	250 aa	Known RBP	4.96	□□□□□ -1.62
KIN28	YDL108W	PXA1	P41909	870 aa		4.96	□□□□□ -1.62
KIN28	YDL108W	GTR1	Q00582	310 aa		4.96	□□□□□ -1.62
KIN28	YDL108W	PRP42	Q03776	544 aa	Known RBP	4.96	□□□□□ -1.62
KIN28	YDL108W	TDA9	Q04545	1251 aa		4.96	□□□□□ -1.62
KIN28	YDL108W	SMD2	Q06217	110 aa	Known RBP	4.96	□□□□□ -1.62
KIN28	YDL108W	APL4	Q12028	832 aa		4.96	□□□□□ -1.62
KIN28	YDL108W	APM4	Q99186	491 aa		4.96	□□□□□ -1.62
KIN28	YDL108W	SUP35	P05453	685 aa	Known RBP	4.95	□□□□□ -1.62
KIN28	YDL108W	RPB2	P08518	1224 aa	Known RBP	4.95	□□□□□ -1.62
KIN28	YDL108W	ERG20	P08524	352 aa	Known RBP	4.95	□□□□□ -1.62
KIN28	YDL108W	RNR1	P21524	888 aa	Known RBP	4.95	□□□□□ -1.62
KIN28	YDL108W	RPN2	P32565	945 aa	Known RBP	4.95	□□□□□ -1.62
KIN28	YDL108W	SSE1	P32589	693 aa	Known RBP	4.95	□□□□□ -1.62
KIN28	YDL108W	YKU70	P32807	602 aa		4.95	□□□□□ -1.62
KIN28	YDL108W	BYE1	P36106	594 aa		4.95	□□□□□ -1.62
KIN28	YDL108W	CTM1	P38818	585 aa		4.95	□□□□□ -1.62
KIN28	YDL108W	ACA1	P39970	489 aa		4.95	□□□□□ -1.62
KIN28	YDL108W	YNL195C	P40168	261 aa		4.95	□□□□□ -1.62
KIN28	YDL108W	SDS3	P40505	327 aa		4.95	□□□□□ -1.62
KIN28	YDL108W	EPL1	P43572	832 aa		4.95	□□□□□ -1.62
KIN28	YDL108W	NIT2	P47016	307 aa		4.95	□□□□□ -1.62
KIN28	YDL108W	MDE1	P47095	244 aa		4.95	□□□□□ -1.62
KIN28	YDL108W	GIM3	P53900	129 aa		4.95	□□□□□ -1.62
KIN28	YDL108W	NOP15	P53927	220 aa	Predicted RBP	4.95	□□□□□ -1.62
KIN28	YDL108W	RNT1	Q02555	471 aa		4.95	□□□□□ -1.62
KIN28	YDL108W	RRN5	Q02983	363 aa		4.95	□□□□□ -1.62
KIN28	YDL108W	GIS1	Q03833	894 aa		4.95	□□□□□ -1.62
KIN28	YDL108W	RRB1	Q04225	511 aa	Known RBP	4.95	□□□□□ -1.62
KIN28	YDL108W	YKU80	Q04437	629 aa		4.95	□□□□□ -1.62
KIN28	YDL108W	ADE13	Q05911	482 aa	Known RBP	4.95	□□□□□ -1.62
KIN28	YDL108W	CSR1	Q06705	408 aa	Known RBP	4.95	□□□□□ -1.62
KIN28	YDL108W	CUE5	Q08412	411 aa	Known RBP	4.95	□□□□□ -1.62
KIN28	YDL108W	VHS3	Q08438	674 aa		4.95	□□□□□ -1.62
KIN28	YDL108W	FRE5	Q08908	694 aa		4.95	□□□□□ -1.62
KIN28	YDL108W	BMS1	Q08965	1183 aa	Known RBP	4.95	□□□□□ -1.62
KIN28	YDL108W	SSM4	P40318	1319 aa		4.95	□□□□□ -1.62
KIN28	YDL108W	RPS17A	P02407	136 aa	Known RBP	4.94	□□□□□ -1.62
KIN28	YDL108W	GLN4	P13188	809 aa	Known RBP	4.94	□□□□□ -1.62
KIN28	YDL108W	RPS17B	P14127	136 aa	Known RBP	4.94	□□□□□ -1.62
KIN28	YDL108W	HCA4	P20448	770 aa	Known RBP	4.94	□□□□□ -1.62
KIN28	YDL108W	MNE1	P24720	663 aa		4.94	□□□□□ -1.62
KIN28	YDL108W	CMK1	P27466	446 aa	Known RBP	4.94	□□□□□ -1.62
KIN28	YDL108W	PPQ1	P32945	549 aa		4.94	□□□□□ -1.62
KIN28	YDL108W	YBR053C	P38235	358 aa		4.94	□□□□□ -1.62
KIN28	YDL108W	SUL1	P38359	859 aa		4.94	□□□□□ -1.62
KIN28	YDL108W	DUN1	P39009	513 aa		4.94	□□□□□ -1.62
KIN28	YDL108W	ALD5	P40047	520 aa	Known RBP	4.94	□□□□□ -1.62
KIN28	YDL108W	RAD26	P40352	1085 aa		4.94	□□□□□ -1.62
KIN28	YDL108W	UTP18	P40362	594 aa	Predicted RBP	4.94	□□□□□ -1.62
KIN28	YDL108W	ERR3	P42222	437 aa		4.94	□□□□□ -1.62
KIN28	YDL108W	NUP84	P52891	726 aa		4.94	□□□□□ -1.62
KIN28	YDL108W	HOP2	P53187	214 aa		4.94	□□□□□ -1.62
KIN28	YDL108W	ADA2	Q02336	434 aa		4.94	□□□□□ -1.62
KIN28	YDL108W	SKY1	Q03656	742 aa		4.94	□□□□□ -1.62
KIN28	YDL108W	HMO1	Q03973	246 aa	Known RBP	4.94	□□□□□ -1.62
KIN28	YDL108W	PHO92	Q06390	306 aa		4.94	□□□□□ -1.62
KIN28	YDL108W	MLH2	Q07980	695 aa		4.94	□□□□□ -1.62
KIN28	YDL108W	ECM3	Q99252	613 aa		4.94	□□□□□ -1.62
KIN28	YDL108W	CTT1	P06115	562 aa		4.93	□□□□□ -1.62
KIN28	YDL108W	PET309	P32522	965 aa	Predicted RBP	4.93	□□□□□ -1.62
KIN28	YDL108W	PET127	P32606	800 aa		4.93	□□□□□ -1.62
KIN28	YDL108W	MDL1	P33310	695 aa		4.93	□□□□□ -1.62
KIN28	YDL108W	COY1	P34237	679 aa		4.93	□□□□□ -1.62
KIN28	YDL108W	FAT1	P38225	669 aa		4.93	□□□□□ -1.62
KIN28	YDL108W	KHA1	P40309	873 aa		4.93	□□□□□ -1.62
KIN28	YDL108W	RIC1	P40395	1056 aa		4.93	□□□□□ -1.62
KIN28	YDL108W	EFM5	P53200	248 aa	Known RBP	4.93	□□□□□ -1.62
KIN28	YDL108W	MTL1	P53214	551 aa		4.93	□□□□□ -1.62
KIN28	YDL108W	EIS1	Q05050	843 aa	Known RBP	4.93	□□□□□ -1.62
KIN28	YDL108W	YLR040C	Q07988	224 aa		4.93	□□□□□ -1.62
KIN28	YDL108W	DIA2	Q08496	732 aa	Predicted RBP	4.93	□□□□□ -1.62
KIN28	YDL108W	NFI1	Q12216	726 aa		4.93	□□□□□ -1.62
KIN28	YDL108W	TRM13	Q12383	476 aa		4.93	□□□□□ -1.62
KIN28	YDL108W	ISA2	Q12425	185 aa		4.93	□□□□□ -1.62
KIN28	YDL108W	HRP1	Q99383	534 aa	Known RBP	4.93	□□□□□ -1.62
KIN28	YDL108W	ALG7	P07286	448 aa		4.92	□□□□□ -1.62
KIN28	YDL108W	FRS1	P15624	595 aa	Known RBP	4.92	□□□□□ -1.62
KIN28	YDL108W	OM45	P16547	393 aa		4.92	□□□□□ -1.62
KIN28	YDL108W	AAC3	P18238	307 aa		4.92	□□□□□ -1.62
KIN28	YDL108W	SEC15	P22224	910 aa		4.92	□□□□□ -1.62
KIN28	YDL108W	GRR1	P24814	1151 aa		4.92	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 19.1 ms