RNA–Protein interactions for RNA: YBR274W

CHK1, Transcript of Serine/threonine kinase and DNA damage checkpoint effector, yeast

Gene CHK1, Length 1,584 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CHK1	YBR274W	DMC1	P25453	334 aa		4.1	□□□□□ -1.75
CHK1	YBR274W	CST26	P38226	397 aa		4.1	□□□□□ -1.75
CHK1	YBR274W	PAN2	P53010	1115 aa	Predicted RBP	4.1	□□□□□ -1.75
CHK1	YBR274W	MLC1	P53141	149 aa		4.1	□□□□□ -1.75
CHK1	YBR274W	SMX3	P54999	86 aa	Predicted RBP	4.1	□□□□□ -1.75
CHK1	YBR274W	ATG16	Q03818	150 aa		4.1	□□□□□ -1.75
CHK1	YBR274W	ENT2	Q05785	613 aa		4.1	□□□□□ -1.75
CHK1	YBR274W	ATG33	Q06485	197 aa		4.1	□□□□□ -1.75
CHK1	YBR274W	KEL3	Q08979	651 aa	Predicted RBP	4.1	□□□□□ -1.75
CHK1	YBR274W	SLX4	Q12098	748 aa		4.1	□□□□□ -1.75
CHK1	YBR274W	SIR3	P06701	978 aa		4.09	□□□□□ -1.75
CHK1	YBR274W	SFL1	P20134	766 aa		4.09	□□□□□ -1.75
CHK1	YBR274W	RNR1	P21524	888 aa	Known RBP	4.09	□□□□□ -1.75
CHK1	YBR274W	PRS1	P32895	427 aa	Known RBP	4.09	□□□□□ -1.75
CHK1	YBR274W	BLI1	P35727	113 aa		4.09	□□□□□ -1.75
CHK1	YBR274W	SFB3	P38810	929 aa		4.09	□□□□□ -1.75
CHK1	YBR274W	TIF4631	P39935	952 aa	Known RBP	4.09	□□□□□ -1.75
CHK1	YBR274W	AIM14	P53109	570 aa		4.09	□□□□□ -1.75
CHK1	YBR274W	CLF1	Q12309	687 aa	Predicted RBP	4.09	□□□□□ -1.75
CHK1	YBR274W	HIF1	Q12373	385 aa		4.09	□□□□□ -1.75
CHK1	YBR274W	PDR18	P53756	1333 aa		4.08	□□□□□ -1.76
CHK1	YBR274W	PRE8	P23639	250 aa		4.08	□□□□□ -1.76
CHK1	YBR274W	JNM1	P36224	373 aa		4.08	□□□□□ -1.76
CHK1	YBR274W	MAL31	P38156	614 aa		4.08	□□□□□ -1.76
CHK1	YBR274W	FUI1	P38196	639 aa		4.08	□□□□□ -1.76
CHK1	YBR274W	TDP1	P38319	544 aa		4.08	□□□□□ -1.76
CHK1	YBR274W	LYS9	P38999	446 aa		4.08	□□□□□ -1.76
CHK1	YBR274W	YMR147W	P40218	223 aa	Known RBP	4.08	□□□□□ -1.76
CHK1	YBR274W	IRC8	P47046	822 aa		4.08	□□□□□ -1.76
CHK1	YBR274W	PMT3	P47190	753 aa		4.08	□□□□□ -1.76
CHK1	YBR274W	YGR021W	P53212	290 aa		4.08	□□□□□ -1.76
CHK1	YBR274W	COX18	P53239	316 aa		4.08	□□□□□ -1.76
CHK1	YBR274W	FOL1	P53848	824 aa		4.08	□□□□□ -1.76
CHK1	YBR274W	DIA2	Q08496	732 aa	Predicted RBP	4.08	□□□□□ -1.76
CHK1	YBR274W	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	4.08	□□□□□ -1.76	not detected
CHK1	YBR274W	HRP1	Q99383	534 aa	Known RBP	4.08	□□□□□ -1.76
CHK1	YBR274W	HMG1	P12683	1054 aa		4.07	□□□□□ -1.76
CHK1	YBR274W	PTH2	P34222	208 aa		4.07	□□□□□ -1.76
CHK1	YBR274W	MPE1	P35728	441 aa	Known RBP	4.07	□□□□□ -1.76
CHK1	YBR274W	APN2	P38207	520 aa		4.07	□□□□□ -1.76
CHK1	YBR274W	PCM1	P38628	557 aa	Known RBP	4.07	□□□□□ -1.76
CHK1	YBR274W	OSH3	P38713	996 aa	Known RBP	4.07	□□□□□ -1.76
CHK1	YBR274W	YJL206C	P39529	758 aa		4.07	□□□□□ -1.76
CHK1	YBR274W	GID8	P40208	455 aa		4.07	□□□□□ -1.76
CHK1	YBR274W	ARG2	P40360	574 aa		4.07	□□□□□ -1.76
CHK1	YBR274W	NDC80	P40460	691 aa		4.07	□□□□□ -1.76
CHK1	YBR274W	SET2	P46995	733 aa	Known RBP	4.07	□□□□□ -1.76
CHK1	YBR274W	ENP2	P48234	707 aa	Known RBP	4.07	□□□□□ -1.76
CHK1	YBR274W	CTR1	P49573	406 aa		4.07	□□□□□ -1.76
CHK1	YBR274W	VPS73	P53142	486 aa	Known RBP	4.07	□□□□□ -1.76
CHK1	YBR274W	ARP4	P80428	489 aa		4.07	□□□□□ -1.76
CHK1	YBR274W	GPD1	Q00055	391 aa	Known RBP	4.07	□□□□□ -1.76
CHK1	YBR274W	TFB2	Q02939	513 aa		4.07	□□□□□ -1.76
CHK1	YBR274W	HMO1	Q03973	246 aa	Known RBP	4.07	□□□□□ -1.76
CHK1	YBR274W	SKG3	Q06315	1026 aa		4.07	□□□□□ -1.76
CHK1	YBR274W	ICL2	Q12031	575 aa		4.07	□□□□□ -1.76
CHK1	YBR274W	ZRT2	Q12436	422 aa		4.07	□□□□□ -1.76
CHK1	YBR274W	KRS1	P15180	591 aa	Known RBP	4.06	□□□□□ -1.76
CHK1	YBR274W	ERG6	P25087	383 aa	Known RBP	4.06	□□□□□ -1.76
CHK1	YBR274W	CCR4	P31384	837 aa	Known RBP	4.06	□□□□□ -1.76
CHK1	YBR274W	EUG1	P32474	517 aa		4.06	□□□□□ -1.76
CHK1	YBR274W	PHO11	P35842	467 aa		4.06	□□□□□ -1.76
CHK1	YBR274W	YPT53	P36019	220 aa		4.06	□□□□□ -1.76
CHK1	YBR274W	PHO12	P38693	467 aa		4.06	□□□□□ -1.76
CHK1	YBR274W	RTS1	P38903	757 aa		4.06	□□□□□ -1.76
CHK1	YBR274W	FUN12	P39730	1002 aa	Known RBP	4.06	□□□□□ -1.76
CHK1	YBR274W	HLJ1	P48353	224 aa		4.06	□□□□□ -1.76
CHK1	YBR274W	PEX8	P53248	589 aa		4.06	□□□□□ -1.76
CHK1	YBR274W	YML037C	Q03703	340 aa		4.06	□□□□□ -1.76
CHK1	YBR274W	VMA2	P16140	517 aa	Known RBP	4.06	□□□□□ -1.76
CHK1	YBR274W	RPA135	P22138	1203 aa	Known RBP	4.06	□□□□□ -1.76
CHK1	YBR274W	PEX1	P24004	1043 aa		4.06	□□□□□ -1.76
CHK1	YBR274W	GLG1	P36143	616 aa		4.06	□□□□□ -1.76
CHK1	YBR274W	GET2	P40056	285 aa		4.06	□□□□□ -1.76
CHK1	YBR274W	YIL166C	P40445	542 aa		4.06	□□□□□ -1.76
CHK1	YBR274W	PIB2	P53191	635 aa		4.06	□□□□□ -1.76
CHK1	YBR274W	ECM30	Q06673	1274 aa		4.06	□□□□□ -1.76
CHK1	YBR274W	TAH18	Q12181	623 aa		4.06	□□□□□ -1.76
CHK1	YBR274W	RAD61	Q99359	647 aa		4.06	□□□□□ -1.76
CHK1	YBR274W	LAM4	P38800	1345 aa		4.05	□□□□□ -1.76
CHK1	YBR274W	TUS1	Q06412	1307 aa		4.05	□□□□□ -1.76
CHK1	YBR274W	CDC16	P09798	840 aa		4.05	□□□□□ -1.76
CHK1	YBR274W	CUE2	P36075	443 aa	Known RBP	4.05	□□□□□ -1.76
CHK1	YBR274W	SSZ1	P38788	538 aa	Known RBP	4.05	□□□□□ -1.76
CHK1	YBR274W	HRB1	P38922	454 aa	Known RBP RIP-Chip data	4.05	□□□□□ -1.76	not detected
CHK1	YBR274W	VID27	P40157	782 aa		4.05	□□□□□ -1.76
CHK1	YBR274W	ATF1	P40353	525 aa		4.05	□□□□□ -1.76
CHK1	YBR274W	NOP9	P47077	666 aa	Known RBP	4.05	□□□□□ -1.76
CHK1	YBR274W	TAH11	P47112	604 aa		4.05	□□□□□ -1.76
CHK1	YBR274W	YGR237C	P50089	785 aa		4.05	□□□□□ -1.76
CHK1	YBR274W	FHN1	P53279	174 aa		4.05	□□□□□ -1.76
CHK1	YBR274W	SOL4	P53315	255 aa		4.05	□□□□□ -1.76
CHK1	YBR274W	ATG4	P53867	494 aa		4.05	□□□□□ -1.76
CHK1	YBR274W	GUD1	Q07729	489 aa		4.05	□□□□□ -1.76
CHK1	YBR274W	ERP4	Q12450	207 aa		4.05	□□□□□ -1.76
CHK1	YBR274W	COQ1	P18900	473 aa		4.04	□□□□□ -1.76
CHK1	YBR274W	OPI1	P21957	404 aa		4.04	□□□□□ -1.76
CHK1	YBR274W	CHS3	P29465	1165 aa		4.04	□□□□□ -1.76
CHK1	YBR274W	RGT1	P32862	1170 aa		4.04	□□□□□ -1.76
CHK1	YBR274W	MRS6	P32864	603 aa	Known RBP	4.04	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 14 ms