RNA–Protein interactions for RNA: YPL085W

SEC16, Transcript of COPII vesicle coat protein required for ER transport vesicle budding, yeastyeast

Gene SEC16, Length 6,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC16YPL085W ENP1P38333 483 aaKnown RBP2.92□□□□□ -1.94
SEC16YPL085W HGH1P48362 394 aaKnown RBP2.92□□□□□ -1.94
SEC16YPL085W MHP1P43638 1398 aa2.91□□□□□ -1.94
SEC16YPL085W PDR5P33302 1511 aaKnown RBP2.91□□□□□ -1.94
SEC16YPL085W BNR1P40450 1375 aa2.91□□□□□ -1.94
SEC16YPL085W RAV1P47104 1357 aa2.91□□□□□ -1.94
SEC16YPL085W YSP2Q06681 1438 aa2.9□□□□□ -1.94
SEC16YPL085W SPT7P35177 1332 aa2.9□□□□□ -1.95
SEC16YPL085W BPT1P14772 1559 aa2.89□□□□□ -1.95
SEC16YPL085W GRX4P32642 244 aa2.89□□□□□ -1.95
SEC16YPL085W CTF4Q01454 927 aa2.89□□□□□ -1.95
SEC16YPL085W PES4P39684 611 aa2.89□□□□□ -1.95
SEC16YPL085W RKR1Q04781 1562 aa2.89□□□□□ -1.95
SEC16YPL085W MDG1P53885 366 aa2.88□□□□□ -1.95
SEC16YPL085W RTC1Q08281 1341 aa2.88□□□□□ -1.95
SEC16YPL085W VTH1P40438 1549 aa2.88□□□□□ -1.95
SEC16YPL085W VTH2P40890 1549 aa2.88□□□□□ -1.95
SEC16YPL085W NUP157P40064 1391 aaKnown RBP2.88□□□□□ -1.95
SEC16YPL085W BUD27P43573 796 aaKnown RBP RIP-Chip data2.87□□□□□ -1.95not detected
SEC16YPL085W SIR4P11978 1358 aa2.86□□□□□ -1.95
SEC16YPL085W ESP1Q03018 1630 aa2.86□□□□□ -1.95
SEC16YPL085W SUP35P05453 685 aaKnown RBP2.86□□□□□ -1.95
SEC16YPL085W RTF1P53064 558 aa2.85□□□□□ -1.95
SEC16YPL085W PDR18P53756 1333 aa2.85□□□□□ -1.95
SEC16YPL085W TAP42Q04372 366 aa2.85□□□□□ -1.95
SEC16YPL085W YEF3P16521 1044 aaKnown RBP2.84□□□□□ -1.95
SEC16YPL085W GDB1Q06625 1536 aa2.84□□□□□ -1.95
SEC16YPL085W SAS10Q12136 610 aaPredicted RBP2.84□□□□□ -1.95
SEC16YPL085W DNF1P32660 1571 aa2.84□□□□□ -1.95
SEC16YPL085W MLP2P40457 1679 aa2.84□□□□□ -1.96
SEC16YPL085W SIS2P36024 562 aa2.84□□□□□ -1.96
SEC16YPL085W YAP3P38749 330 aa2.83□□□□□ -1.96
SEC16YPL085W SPT5P27692 1063 aaKnown RBP2.83□□□□□ -1.96
SEC16YPL085W ATG2P53855 1592 aa2.82□□□□□ -1.96
SEC16YPL085W TPM1P17536 199 aaKnown RBP2.82□□□□□ -1.96
SEC16YPL085W MTR4P47047 1073 aaKnown RBP2.82□□□□□ -1.96
SEC16YPL085W EBP2P36049 427 aaKnown RBP2.82□□□□□ -1.96
SEC16YPL085W ENV11P53246 860 aa2.82□□□□□ -1.96
SEC16YPL085W MAK21Q12176 1025 aaKnown RBP2.82□□□□□ -1.96
SEC16YPL085W FAR11P53917 953 aa2.82□□□□□ -1.96
SEC16YPL085W PSK1P31374 1356 aa2.81□□□□□ -1.96
SEC16YPL085W SEC20P28791 383 aa2.81□□□□□ -1.96
SEC16YPL085W PRP43P53131 767 aaKnown RBP2.81□□□□□ -1.96
SEC16YPL085W DIB1Q06819 143 aaPredicted RBP2.81□□□□□ -1.96
SEC16YPL085W GTT3P39996 337 aa2.81□□□□□ -1.96
SEC16YPL085W YLR419WQ06698 1435 aaKnown RBP2.81□□□□□ -1.96
SEC16YPL085W PDI1P17967 522 aaKnown RBP2.81□□□□□ -1.96
SEC16YPL085W DMA1P38823 416 aa2.81□□□□□ -1.96
SEC16YPL085W TY3B-GQ99315 1547 aa2.81□□□□□ -1.96
SEC16YPL085W NPL4P33755 580 aa2.81□□□□□ -1.96
SEC16YPL085W MRX12P47084 519 aa2.8□□□□□ -1.96
SEC16YPL085W LYS2P07702 1392 aa2.8□□□□□ -1.96
SEC16YPL085W GEF1P37020 779 aa2.8□□□□□ -1.96
SEC16YPL085W CDC45Q08032 650 aa2.8□□□□□ -1.96
SEC16YPL085W FPR3P38911 411 aaKnown RBP2.8□□□□□ -1.96
SEC16YPL085W PDR15Q04182 1529 aaKnown RBP2.8□□□□□ -1.96
SEC16YPL085W VPS27P40343 622 aaKnown RBP2.8□□□□□ -1.96
SEC16YPL085W IRC20Q06554 1556 aa2.8□□□□□ -1.96
SEC16YPL085W NSR1P27476 414 aaKnown RBP RIP-Chip data2.8□□□□□ -1.96not detected
SEC16YPL085W MAM1P40065 302 aa2.8□□□□□ -1.96
SEC16YPL085W ADE6P38972 1358 aaKnown RBP2.79□□□□□ -1.96
SEC16YPL085W IPL1P38991 367 aa2.79□□□□□ -1.96
SEC16YPL085W IFH1P39520 1085 aa2.79□□□□□ -1.96
SEC16YPL085W MEC3Q02574 474 aa2.79□□□□□ -1.96
SEC16YPL085W PSF3Q12146 194 aa2.78□□□□□ -1.96
SEC16YPL085W ETT1Q08421 412 aaKnown RBP2.78□□□□□ -1.96
SEC16YPL085W ALD4P46367 519 aaKnown RBP2.77□□□□□ -1.97
SEC16YPL085W UBX2Q04228 584 aa2.77□□□□□ -1.97
SEC16YPL085W TY3B-IQ7LHG5 1498 aaKnown RBP2.76□□□□□ -1.97
SEC16YPL085W AIM44Q99299 758 aa2.76□□□□□ -1.97
SEC16YPL085W ESC1Q03661 1658 aaKnown RBP2.76□□□□□ -1.97
SEC16YPL085W NOP8Q08287 484 aaPredicted RBP2.76□□□□□ -1.97
SEC16YPL085W SPE2P21182 396 aa2.76□□□□□ -1.97
SEC16YPL085W UGA3P26370 528 aa2.76□□□□□ -1.97
SEC16YPL085W ASF1P32447 279 aa2.76□□□□□ -1.97
SEC16YPL085W RPL22AP05749 121 aaKnown RBP2.75□□□□□ -1.97
SEC16YPL085W SSK22P25390 1331 aaPredicted RBP2.75□□□□□ -1.97
SEC16YPL085W OSH3P38713 996 aaKnown RBP2.75□□□□□ -1.97
SEC16YPL085W ENP2P48234 707 aaKnown RBP2.75□□□□□ -1.97
SEC16YPL085W CLF1Q12309 687 aaPredicted RBP2.75□□□□□ -1.97
SEC16YPL085W LEO1P38439 464 aa2.75□□□□□ -1.97
SEC16YPL085W SNF7P39929 240 aaKnown RBP2.75□□□□□ -1.97
SEC16YPL085W RAD9P14737 1309 aa2.75□□□□□ -1.97
SEC16YPL085W CKB1P43639 278 aa2.75□□□□□ -1.97
SEC16YPL085W PDS5Q04264 1277 aa2.74□□□□□ -1.97
SEC16YPL085W ABP1P15891 592 aaKnown RBP2.74□□□□□ -1.97
SEC16YPL085W HSP104P31539 908 aaKnown RBP2.74□□□□□ -1.97
SEC16YPL085W NSE3Q05541 303 aa2.74□□□□□ -1.97
SEC16YPL085W UBP1P25037 809 aa2.73□□□□□ -1.97
SEC16YPL085W ARO1P08566 1588 aaKnown RBP2.73□□□□□ -1.97
SEC16YPL085W RPO41P13433 1351 aaKnown RBP2.73□□□□□ -1.97
SEC16YPL085W AVT3P36062 692 aa2.73□□□□□ -1.97
SEC16YPL085W DIP2Q12220 943 aaPredicted RBP2.73□□□□□ -1.97
SEC16YPL085W RPS9AO13516 197 aaKnown RBP2.73□□□□□ -1.97
SEC16YPL085W LEU2P04173 364 aaPredicted RBP2.73□□□□□ -1.97
SEC16YPL085W RAD2P07276 1031 aa2.73□□□□□ -1.97
SEC16YPL085W MIF2P35201 549 aa2.73□□□□□ -1.97
SEC16YPL085W NMD2P38798 1089 aaKnown RBP2.72□□□□□ -1.97
SEC16YPL085W MAK10Q02197 733 aa2.72□□□□□ -1.97
SEC16YPL085W PIF1P07271 859 aa2.72□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 29.1 ms