RNA–Protein interactions for RNA: YOR359W

VTS1, Transcript of Flap-structured DNA-binding and RNA-binding protein, yeastyeast

Gene VTS1, Length 1,572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VTS1YOR359W MRM1P25270 412 aa8.57□□□□□ -1.04
VTS1YOR359W CHD1P32657 1468 aa8.57□□□□□ -1.04
VTS1YOR359W UFD4P33202 1483 aa8.55□□□□□ -1.04
VTS1YOR359W RNA1P11745 407 aaKnown RBP8.55□□□□□ -1.04
VTS1YOR359W FPR4Q06205 392 aaPredicted RBP8.54□□□□□ -1.04
VTS1YOR359W MMS22Q06164 1454 aa8.53□□□□□ -1.04
VTS1YOR359W HSP82P02829 709 aaKnown RBP8.52□□□□□ -1.05
VTS1YOR359W PSH1Q12161 406 aa8.52□□□□□ -1.05
VTS1YOR359W SPT2P06843 333 aaPredicted RBP8.51□□□□□ -1.05
VTS1YOR359W LDB19Q12502 818 aa8.5□□□□□ -1.05
VTS1YOR359W FUN12P39730 1002 aaKnown RBP8.49□□□□□ -1.05
VTS1YOR359W EAF7P53911 425 aaKnown RBP8.49□□□□□ -1.05
VTS1YOR359W PRS1P32895 427 aaKnown RBP8.48□□□□□ -1.05
VTS1YOR359W ULI1P43604 169 aa8.48□□□□□ -1.05
VTS1YOR359W PLP2Q12017 286 aa8.48□□□□□ -1.05
VTS1YOR359W SPP41P38904 1435 aa8.48□□□□□ -1.05
VTS1YOR359W YJL171CP46992 396 aa8.48□□□□□ -1.05
VTS1YOR359W YTA7P40340 1379 aa8.47□□□□□ -1.05
VTS1YOR359W INO80P53115 1489 aa8.47□□□□□ -1.05
VTS1YOR359W SSP1P38871 571 aa8.47□□□□□ -1.05
VTS1YOR359W IOC2Q12072 812 aa8.47□□□□□ -1.05
VTS1YOR359W ECM5Q03214 1411 aa8.46□□□□□ -1.06
VTS1YOR359W POL5P39985 1022 aaKnown RBP8.46□□□□□ -1.06
VTS1YOR359W IOC4Q04213 475 aa8.45□□□□□ -1.06
VTS1YOR359W SPC110P32380 944 aa8.44□□□□□ -1.06
VTS1YOR359W ARP8Q12386 881 aaKnown RBP RIP-Chip data8.44□□□□□ -1.06not detected
VTS1YOR359W CST9Q06032 482 aa8.43□□□□□ -1.06
VTS1YOR359W XRN1P22147 1528 aaKnown RBP8.41□□□□□ -1.06
VTS1YOR359W NMD2P38798 1089 aaKnown RBP8.41□□□□□ -1.06
VTS1YOR359W OPY1P38271 328 aa8.4□□□□□ -1.06
VTS1YOR359W MON2P48563 1636 aaPredicted RBP8.39□□□□□ -1.07
VTS1YOR359W YOL036WQ08206 761 aa8.39□□□□□ -1.07
VTS1YOR359W SAS10Q12136 610 aaPredicted RBP8.39□□□□□ -1.07
VTS1YOR359W MSB4Q12317 492 aa8.39□□□□□ -1.07
VTS1YOR359W VPS29P38759 282 aa8.38□□□□□ -1.07
VTS1YOR359W SET4P42948 560 aa8.38□□□□□ -1.07
VTS1YOR359W PAF1P38351 445 aa8.37□□□□□ -1.07
VTS1YOR359W SNF7P39929 240 aaKnown RBP8.37□□□□□ -1.07
VTS1YOR359W YFR006WP43590 535 aa8.36□□□□□ -1.07
VTS1YOR359W YMR1P47147 688 aaKnown RBP RIP-Chip data8.36□□□□□ -1.07not detected
VTS1YOR359W DBP1P24784 617 aaKnown RBP8.35□□□□□ -1.07
VTS1YOR359W PIL1P53252 339 aaKnown RBP8.35□□□□□ -1.07
VTS1YOR359W YNL011CP53980 444 aa8.35□□□□□ -1.07
VTS1YOR359W RLP24Q07915 199 aaKnown RBP8.35□□□□□ -1.07
VTS1YOR359W BMT6Q12291 365 aa8.35□□□□□ -1.07
VTS1YOR359W STS1P38637 319 aa8.34□□□□□ -1.07
VTS1YOR359W RPN1P38764 993 aaKnown RBP8.34□□□□□ -1.07
VTS1YOR359W EAP1P36041 632 aaKnown RBP8.33□□□□□ -1.08
VTS1YOR359W PEP1P32319 1579 aa8.32□□□□□ -1.08
VTS1YOR359W TOP2P06786 1428 aaKnown RBP8.32□□□□□ -1.08
VTS1YOR359W TRP5P00931 707 aaKnown RBP8.31□□□□□ -1.08
VTS1YOR359W RTG1P32607 177 aa8.31□□□□□ -1.08
VTS1YOR359W VPS4P52917 437 aa8.31□□□□□ -1.08
VTS1YOR359W VMA1P17255 1071 aaKnown RBP8.31□□□□□ -1.08
VTS1YOR359W RTG3P38165 486 aa8.31□□□□□ -1.08
VTS1YOR359W MGA2P40578 1113 aa8.31□□□□□ -1.08
VTS1YOR359W CFT1Q06632 1357 aaKnown RBP8.29□□□□□ -1.08
VTS1YOR359W RPC31P17890 251 aa8.29□□□□□ -1.08
VTS1YOR359W SMC3P47037 1230 aa8.29□□□□□ -1.08
VTS1YOR359W NOP58Q12499 511 aaKnown RBP8.29□□□□□ -1.08
VTS1YOR359W RCR1P38212 213 aa8.28□□□□□ -1.08
VTS1YOR359W MSH4P40965 878 aaPredicted RBP8.27□□□□□ -1.09
VTS1YOR359W TRM732Q03496 1420 aa8.26□□□□□ -1.09
VTS1YOR359W SRB8P25648 1427 aa8.25□□□□□ -1.09
VTS1YOR359W IKI3Q06706 1349 aaKnown RBP8.25□□□□□ -1.09
VTS1YOR359W IFH1P39520 1085 aa8.25□□□□□ -1.09
VTS1YOR359W SNU71P53207 620 aaKnown RBP8.25□□□□□ -1.09
VTS1YOR359W ROX1P25042 368 aa8.24□□□□□ -1.09
VTS1YOR359W RPS0AP32905 252 aaKnown RBP8.24□□□□□ -1.09
VTS1YOR359W SAM3Q08986 587 aa8.24□□□□□ -1.09
VTS1YOR359W BUD4P47136 1447 aa8.24□□□□□ -1.09
VTS1YOR359W MMS1Q06211 1407 aa8.24□□□□□ -1.09
VTS1YOR359W NNF2P53253 936 aa8.23□□□□□ -1.09
VTS1YOR359W NCR1Q12200 1170 aa8.22□□□□□ -1.09
VTS1YOR359W MYO4P32492 1471 aa8.22□□□□□ -1.09
VTS1YOR359W TOP1P04786 769 aa8.22□□□□□ -1.09
VTS1YOR359W RAD26P40352 1085 aa8.22□□□□□ -1.09
VTS1YOR359W YNL035CP53962 389 aaKnown RBP8.22□□□□□ -1.09
VTS1YOR359W CTR9P89105 1077 aa8.22□□□□□ -1.09
VTS1YOR359W ETT1Q08421 412 aaKnown RBP8.21□□□□□ -1.1
VTS1YOR359W NST1P53935 1240 aa8.2□□□□□ -1.1
VTS1YOR359W GRX3Q03835 250 aa8.2□□□□□ -1.1
VTS1YOR359W BYE1P36106 594 aa8.19□□□□□ -1.1
VTS1YOR359W TAN1P53072 289 aaPredicted RBP8.19□□□□□ -1.1
VTS1YOR359W DOS2P54858 310 aa8.19□□□□□ -1.1
VTS1YOR359W PRP3Q03338 469 aaPredicted RBP8.19□□□□□ -1.1
VTS1YOR359W PDR10P51533 1564 aa8.19□□□□□ -1.1
VTS1YOR359W MSH3P25336 1018 aa8.18□□□□□ -1.1
VTS1YOR359W SEC61P32915 480 aa8.18□□□□□ -1.1
VTS1YOR359W SIC1P38634 284 aa8.18□□□□□ -1.1
VTS1YOR359W YLR419WQ06698 1435 aaKnown RBP8.18□□□□□ -1.1
VTS1YOR359W LTV1P34078 463 aa8.18□□□□□ -1.1
VTS1YOR359W MDG1P53885 366 aa8.18□□□□□ -1.1
VTS1YOR359W SLN1P39928 1220 aaPredicted RBP8.17□□□□□ -1.1
VTS1YOR359W YSH1Q06224 779 aaPredicted RBP8.17□□□□□ -1.1
VTS1YOR359W THO2P53552 1597 aaKnown RBP8.17□□□□□ -1.1
VTS1YOR359W CBF5P33322 483 aaKnown RBP RIP-Chip data8.16□□□□□ -1.1not detected
VTS1YOR359W EDE1P34216 1381 aa8.14□□□□□ -1.11
VTS1YOR359W SWE1P32944 819 aa8.14□□□□□ -1.11
VTS1YOR359W YIR014WP40570 242 aa8.14□□□□□ -1.11
Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms