RNA–Protein interactions for RNA: YOR033C

EXO1, Transcript of 5'-3' exonuclease and flap-endonuclease, yeast

Gene EXO1, Length 2,109 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
EXO1	YOR033C	ETT1	Q08421	412 aa	Known RBP	6.29	□□□□□ -1.4
EXO1	YOR033C	TIF4632	P39936	914 aa	Known RBP	6.29	□□□□□ -1.4
EXO1	YOR033C	NNF2	P53253	936 aa		6.29	□□□□□ -1.4
EXO1	YOR033C	HIF1	Q12373	385 aa		6.29	□□□□□ -1.4
EXO1	YOR033C	PAF1	P38351	445 aa		6.28	□□□□□ -1.4
EXO1	YOR033C	PRS1	P32895	427 aa	Known RBP	6.28	□□□□□ -1.4
EXO1	YOR033C	MSH4	P40965	878 aa	Predicted RBP	6.28	□□□□□ -1.4
EXO1	YOR033C	SSN2	P38931	1420 aa		6.28	□□□□□ -1.4
EXO1	YOR033C	TOA1	P32773	286 aa		6.27	□□□□□ -1.41
EXO1	YOR033C	SWE1	P32944	819 aa		6.26	□□□□□ -1.41
EXO1	YOR033C	OPY1	P38271	328 aa		6.26	□□□□□ -1.41
EXO1	YOR033C	ORC1	P54784	914 aa	Predicted RBP	6.26	□□□□□ -1.41
EXO1	YOR033C	YSH1	Q06224	779 aa	Predicted RBP	6.26	□□□□□ -1.41
EXO1	YOR033C	RAD26	P40352	1085 aa		6.25	□□□□□ -1.41
EXO1	YOR033C	TLG1	Q03322	224 aa		6.25	□□□□□ -1.41
EXO1	YOR033C	MSH3	P25336	1018 aa		6.25	□□□□□ -1.41
EXO1	YOR033C	NHA1	Q99271	985 aa		6.25	□□□□□ -1.41
EXO1	YOR033C	MGA2	P40578	1113 aa		6.24	□□□□□ -1.41
EXO1	YOR033C	SSA1	P10591	642 aa	Known RBP	6.23	□□□□□ -1.41
EXO1	YOR033C	SSA2	P10592	639 aa	Known RBP	6.23	□□□□□ -1.41
EXO1	YOR033C	SNF7	P39929	240 aa	Known RBP	6.23	□□□□□ -1.41
EXO1	YOR033C	POL5	P39985	1022 aa	Known RBP	6.23	□□□□□ -1.41
EXO1	YOR033C	SUB1	P54000	292 aa	Known RBP	6.23	□□□□□ -1.41
EXO1	YOR033C	SMC3	P47037	1230 aa		6.23	□□□□□ -1.41
EXO1	YOR033C	LTV1	P34078	463 aa		6.22	□□□□□ -1.41
EXO1	YOR033C	BCH2	P36122	765 aa		6.22	□□□□□ -1.41
EXO1	YOR033C	NST1	P53935	1240 aa		6.22	□□□□□ -1.41
EXO1	YOR033C	AI2	P03876	854 aa		6.22	□□□□□ -1.41
EXO1	YOR033C	CTR9	P89105	1077 aa		6.22	□□□□□ -1.41
EXO1	YOR033C	PRP3	Q03338	469 aa	Predicted RBP	6.22	□□□□□ -1.41
EXO1	YOR033C	ECM16	Q04217	1267 aa	Known RBP	6.22	□□□□□ -1.41
EXO1	YOR033C	GIN4	Q12263	1142 aa		6.22	□□□□□ -1.41
EXO1	YOR033C	NOP58	Q12499	511 aa	Known RBP	6.22	□□□□□ -1.41
EXO1	YOR033C	CBF5	P33322	483 aa	Known RBP RIP-Chip data	6.21	□□□□□ -1.42	not detected
EXO1	YOR033C	SIC1	P38634	284 aa		6.21	□□□□□ -1.42
EXO1	YOR033C	CST9	Q06032	482 aa		6.2	□□□□□ -1.42
EXO1	YOR033C	RPN7	Q06103	429 aa	Known RBP	6.2	□□□□□ -1.42
EXO1	YOR033C	RPC31	P17890	251 aa		6.19	□□□□□ -1.42
EXO1	YOR033C	TAN1	P53072	289 aa	Predicted RBP	6.19	□□□□□ -1.42
EXO1	YOR033C	PSD2	P53037	1138 aa	Known RBP	6.19	□□□□□ -1.42
EXO1	YOR033C	CFT1	Q06632	1357 aa	Known RBP	6.18	□□□□□ -1.42
EXO1	YOR033C	SPT16	P32558	1035 aa	Known RBP	6.17	□□□□□ -1.42
EXO1	YOR033C	DSN1	P40568	576 aa		6.17	□□□□□ -1.42
EXO1	YOR033C	RRP14	P36080	434 aa	Known RBP	6.17	□□□□□ -1.42
EXO1	YOR033C	BYE1	P36106	594 aa		6.17	□□□□□ -1.42
EXO1	YOR033C	NOP8	Q08287	484 aa	Predicted RBP	6.16	□□□□□ -1.42
EXO1	YOR033C	BBC1	P47068	1157 aa		6.15	□□□□□ -1.42
EXO1	YOR033C	ROX1	P25042	368 aa		6.14	□□□□□ -1.43
EXO1	YOR033C	CLB5	P30283	435 aa		6.14	□□□□□ -1.43
EXO1	YOR033C	SAP190	P36123	1033 aa		6.13	□□□□□ -1.43
EXO1	YOR033C	EPS1	P40557	701 aa		6.13	□□□□□ -1.43
EXO1	YOR033C	YPP1	P46951	817 aa		6.13	□□□□□ -1.43
EXO1	YOR033C	PET111	P08468	800 aa		6.13	□□□□□ -1.43
EXO1	YOR033C	APL5	Q08951	932 aa	Known RBP	6.12	□□□□□ -1.43
EXO1	YOR033C	ECM5	Q03214	1411 aa		6.11	□□□□□ -1.43
EXO1	YOR033C	MCM1	P11746	286 aa		6.11	□□□□□ -1.43
EXO1	YOR033C	PEA2	P40091	420 aa		6.11	□□□□□ -1.43
EXO1	YOR033C	MPP10	P47083	593 aa	Known RBP	6.11	□□□□□ -1.43
EXO1	YOR033C	TY1B-A	O13527	1196 aa	Known RBP	6.11	□□□□□ -1.43
EXO1	YOR033C	DEP1	P31385	405 aa		6.11	□□□□□ -1.43
EXO1	YOR033C	SEC9	P40357	651 aa		6.11	□□□□□ -1.43
EXO1	YOR033C	PAP2	P53632	584 aa	Known RBP	6.11	□□□□□ -1.43
EXO1	YOR033C	SLN1	P39928	1220 aa	Predicted RBP	6.1	□□□□□ -1.43
EXO1	YOR033C	RSC8	P43609	557 aa	Known RBP	6.1	□□□□□ -1.43
EXO1	YOR033C	UFD4	P33202	1483 aa		6.1	□□□□□ -1.43
EXO1	YOR033C	CDC11	P32458	415 aa		6.1	□□□□□ -1.43
EXO1	YOR033C	SCY1	P53009	804 aa		6.1	□□□□□ -1.43
EXO1	YOR033C	YLL054C	Q12244	843 aa		6.1	□□□□□ -1.43
EXO1	YOR033C	SUP35	P05453	685 aa	Known RBP	6.09	□□□□□ -1.43
EXO1	YOR033C	LEM3	P42838	414 aa		6.09	□□□□□ -1.43
EXO1	YOR033C	BMS1	Q08965	1183 aa	Known RBP	6.09	□□□□□ -1.43
EXO1	YOR033C	TOP2	P06786	1428 aa	Known RBP	6.09	□□□□□ -1.43
EXO1	YOR033C	SPP41	P38904	1435 aa		6.09	□□□□□ -1.43
EXO1	YOR033C	BDF1	P35817	686 aa		6.08	□□□□□ -1.44
EXO1	YOR033C	MED8	P38304	223 aa		6.08	□□□□□ -1.44
EXO1	YOR033C	RRP15	Q06511	250 aa	Predicted RBP	6.08	□□□□□ -1.44
EXO1	YOR033C	MMS22	Q06164	1454 aa		6.07	□□□□□ -1.44
EXO1	YOR033C	HSC82	P15108	705 aa	Known RBP	6.07	□□□□□ -1.44
EXO1	YOR033C	SRP54	P20424	541 aa	Known RBP	6.07	□□□□□ -1.44
EXO1	YOR033C	MMS1	Q06211	1407 aa		6.07	□□□□□ -1.44
EXO1	YOR033C	RAD51	P25454	400 aa		6.07	□□□□□ -1.44
EXO1	YOR033C	MAP2	P38174	421 aa	Known RBP	6.07	□□□□□ -1.44
EXO1	YOR033C	LEU3	P08638	886 aa		6.06	□□□□□ -1.44
EXO1	YOR033C	BRN1	P38170	754 aa		6.06	□□□□□ -1.44
EXO1	YOR033C	YMR124W	P39523	943 aa	Known RBP	6.06	□□□□□ -1.44
EXO1	YOR033C	ECM1	P39715	212 aa		6.06	□□□□□ -1.44
EXO1	YOR033C	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	6.06	□□□□□ -1.44	RIP-Chip
EXO1	YOR033C	RPC82	P32349	654 aa		6.05	□□□□□ -1.44
EXO1	YOR033C	ALD3	P54114	506 aa		6.05	□□□□□ -1.44
EXO1	YOR033C	YVC1	Q12324	675 aa		6.05	□□□□□ -1.44
EXO1	YOR033C	BRL1	P38770	471 aa		6.05	□□□□□ -1.44
EXO1	YOR033C	VPS72	Q03388	795 aa		6.05	□□□□□ -1.44
EXO1	YOR033C	ERV41	Q04651	352 aa		6.05	□□□□□ -1.44
EXO1	YOR033C	MRM1	P25270	412 aa		6.04	□□□□□ -1.44
EXO1	YOR033C	AIM20	P40451	204 aa		6.04	□□□□□ -1.44
EXO1	YOR033C	HOS4	P40480	1083 aa		6.04	□□□□□ -1.44
EXO1	YOR033C	DJP1	P40564	432 aa		6.04	□□□□□ -1.44
EXO1	YOR033C	VID30	P53076	958 aa		6.04	□□□□□ -1.44
EXO1	YOR033C	UBP10	P53874	792 aa	Predicted RBP	6.04	□□□□□ -1.44
EXO1	YOR033C	NOT3	P06102	836 aa	Known RBP	6.04	□□□□□ -1.44

Retrieved 100 of 5,963 RNA–protein pairs in 11.9 ms