RNA–Protein interactions for RNA: YNL242W

ATG2, Transcript of Peripheral membrane protein required for autophagic vesicle formation, yeast

Gene ATG2, Length 4,779 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATG2	YNL242W	RVB2	Q12464	471 aa	Known RBP	4.91	□□□□□ -1.62
ATG2	YNL242W	SIN3	P22579	1536 aa		4.9	□□□□□ -1.62
ATG2	YNL242W	RKR1	Q04781	1562 aa		4.9	□□□□□ -1.62
ATG2	YNL242W	ESP1	Q03018	1630 aa		4.9	□□□□□ -1.62
ATG2	YNL242W	SRB8	P25648	1427 aa		4.9	□□□□□ -1.63
ATG2	YNL242W	MYO4	P32492	1471 aa		4.9	□□□□□ -1.63
ATG2	YNL242W	YOR1	P53049	1477 aa		4.89	□□□□□ -1.63
ATG2	YNL242W	YPP1	P46951	817 aa		4.89	□□□□□ -1.63
ATG2	YNL242W	CDC45	Q08032	650 aa		4.89	□□□□□ -1.63
ATG2	YNL242W	SPT21	P35209	758 aa		4.89	□□□□□ -1.63
ATG2	YNL242W	TAF5	P38129	798 aa		4.89	□□□□□ -1.63
ATG2	YNL242W	ROX1	P25042	368 aa		4.89	□□□□□ -1.63
ATG2	YNL242W	VPS27	P40343	622 aa	Known RBP	4.88	□□□□□ -1.63
ATG2	YNL242W	FPR4	Q06205	392 aa	Predicted RBP	4.88	□□□□□ -1.63
ATG2	YNL242W	KIP3	P53086	805 aa	Known RBP	4.88	□□□□□ -1.63
ATG2	YNL242W	YDL144C	Q07589	356 aa		4.88	□□□□□ -1.63
ATG2	YNL242W	KOG1	P38873	1557 aa		4.87	□□□□□ -1.63
ATG2	YNL242W	PDR15	Q04182	1529 aa	Known RBP	4.87	□□□□□ -1.63
ATG2	YNL242W	YPK9	Q12697	1472 aa		4.86	□□□□□ -1.63
ATG2	YNL242W	DEF1	P35732	738 aa	Known RBP	4.86	□□□□□ -1.63
ATG2	YNL242W	SLN1	P39928	1220 aa	Predicted RBP	4.86	□□□□□ -1.63
ATG2	YNL242W	VPS15	P22219	1454 aa		4.86	□□□□□ -1.63
ATG2	YNL242W	ARL1	P38116	183 aa	Known RBP	4.85	□□□□□ -1.63
ATG2	YNL242W	YGL081W	P53156	320 aa		4.85	□□□□□ -1.63
ATG2	YNL242W	ENV11	P53246	860 aa		4.85	□□□□□ -1.63
ATG2	YNL242W	RLF2	Q12495	606 aa		4.85	□□□□□ -1.63
ATG2	YNL242W	PCT1	P13259	424 aa		4.85	□□□□□ -1.63
ATG2	YNL242W	SWE1	P32944	819 aa		4.85	□□□□□ -1.63
ATG2	YNL242W	VPS24	P36095	224 aa	Known RBP	4.85	□□□□□ -1.63
ATG2	YNL242W	YGR130C	P53278	816 aa		4.85	□□□□□ -1.63
ATG2	YNL242W	CTR9	P89105	1077 aa		4.85	□□□□□ -1.63
ATG2	YNL242W	NOP58	Q12499	511 aa	Known RBP	4.84	□□□□□ -1.63
ATG2	YNL242W	YCF1	P39109	1515 aa	Known RBP	4.84	□□□□□ -1.63
ATG2	YNL242W	PSH1	Q12161	406 aa		4.84	□□□□□ -1.63
ATG2	YNL242W	MET10	P39692	1035 aa		4.84	□□□□□ -1.64
ATG2	YNL242W	TOP2	P06786	1428 aa	Known RBP	4.83	□□□□□ -1.64
ATG2	YNL242W	DAL5	P15365	543 aa		4.83	□□□□□ -1.64
ATG2	YNL242W	KRI1	P42846	591 aa	Known RBP	4.83	□□□□□ -1.64
ATG2	YNL242W	RAD2	P07276	1031 aa		4.82	□□□□□ -1.64
ATG2	YNL242W	YLR419W	Q06698	1435 aa	Known RBP	4.82	□□□□□ -1.64
ATG2	YNL242W	RAD26	P40352	1085 aa		4.82	□□□□□ -1.64
ATG2	YNL242W	MPP10	P47083	593 aa	Known RBP	4.82	□□□□□ -1.64
ATG2	YNL242W	NUP170	P38181	1502 aa		4.81	□□□□□ -1.64
ATG2	YNL242W	JIP3	O13555	125 aa		4.81	□□□□□ -1.64
ATG2	YNL242W	MDG1	P53885	366 aa		4.81	□□□□□ -1.64
ATG2	YNL242W	YFR006W	P43590	535 aa		4.81	□□□□□ -1.64
ATG2	YNL242W	DIP2	Q12220	943 aa	Predicted RBP	4.81	□□□□□ -1.64
ATG2	YNL242W	DOS2	P54858	310 aa		4.8	□□□□□ -1.64
ATG2	YNL242W	SUI2	P20459	304 aa	Known RBP	4.8	□□□□□ -1.64
ATG2	YNL242W	MSP1	P28737	362 aa		4.8	□□□□□ -1.64
ATG2	YNL242W	NUP159	P40477	1460 aa		4.8	□□□□□ -1.64
ATG2	YNL242W	RTG3	P38165	486 aa		4.8	□□□□□ -1.64
ATG2	YNL242W	COG8	Q04632	607 aa		4.79	□□□□□ -1.64
ATG2	YNL242W	DNF1	P32660	1571 aa		4.79	□□□□□ -1.64
ATG2	YNL242W	ESC2	Q06340	456 aa		4.79	□□□□□ -1.64
ATG2	YNL242W	RPP0	P05317	312 aa	Known RBP	4.79	□□□□□ -1.64
ATG2	YNL242W	MMS1	Q06211	1407 aa		4.79	□□□□□ -1.64
ATG2	YNL242W	SPT2	P06843	333 aa	Predicted RBP	4.78	□□□□□ -1.64
ATG2	YNL242W	UBP1	P25037	809 aa		4.78	□□□□□ -1.64
ATG2	YNL242W	SPB4	P25808	606 aa	Predicted RBP	4.78	□□□□□ -1.64
ATG2	YNL242W	MLP2	P40457	1679 aa		4.78	□□□□□ -1.64
ATG2	YNL242W	NUG1	P40010	520 aa	Known RBP	4.78	□□□□□ -1.64
ATG2	YNL242W	CLB5	P30283	435 aa		4.78	□□□□□ -1.64
ATG2	YNL242W	PUF6	Q04373	656 aa	Known RBP	4.78	□□□□□ -1.64
ATG2	YNL242W	TPM2	P40414	161 aa		4.77	□□□□□ -1.65
ATG2	YNL242W	DRS2	P39524	1355 aa		4.77	□□□□□ -1.65
ATG2	YNL242W	ITC1	P53125	1264 aa		4.77	□□□□□ -1.65
ATG2	YNL242W	IQG1	Q12280	1495 aa		4.77	□□□□□ -1.65
ATG2	YNL242W	SEN54	Q02825	467 aa	Predicted RBP	4.77	□□□□□ -1.65
ATG2	YNL242W	RRT14	P40470	206 aa		4.77	□□□□□ -1.65
ATG2	YNL242W	YIR014W	P40570	242 aa		4.77	□□□□□ -1.65
ATG2	YNL242W	MFT1	P33441	392 aa	Known RBP	4.76	□□□□□ -1.65
ATG2	YNL242W	RTR1	P40084	226 aa	Predicted RBP	4.76	□□□□□ -1.65
ATG2	YNL242W	PAP2	P53632	584 aa	Known RBP	4.76	□□□□□ -1.65
ATG2	YNL242W	RSC1	P53236	928 aa		4.76	□□□□□ -1.65
ATG2	YNL242W	CSE4	P36012	229 aa		4.76	□□□□□ -1.65
ATG2	YNL242W	RPO31	P04051	1460 aa		4.76	□□□□□ -1.65
ATG2	YNL242W	KNS1	P32350	737 aa	Predicted RBP	4.76	□□□□□ -1.65
ATG2	YNL242W	MDS3	P53094	1487 aa		4.75	□□□□□ -1.65
ATG2	YNL242W	NOT3	P06102	836 aa	Known RBP	4.75	□□□□□ -1.65
ATG2	YNL242W	TRK1	P12685	1235 aa		4.75	□□□□□ -1.65
ATG2	YNL242W	TPD3	P31383	635 aa		4.75	□□□□□ -1.65
ATG2	YNL242W	ESL2	P36168	1195 aa		4.75	□□□□□ -1.65
ATG2	YNL242W	SPE2	P21182	396 aa		4.75	□□□□□ -1.65
ATG2	YNL242W	CHZ1	P40019	153 aa	Predicted RBP	4.75	□□□□□ -1.65
ATG2	YNL242W	TEA1	P47988	759 aa		4.75	□□□□□ -1.65
ATG2	YNL242W	PEP1	P32319	1579 aa		4.75	□□□□□ -1.65
ATG2	YNL242W	MIC60	P36112	540 aa		4.74	□□□□□ -1.65
ATG2	YNL242W	LCD1	Q04377	747 aa		4.74	□□□□□ -1.65
ATG2	YNL242W	DSN1	P40568	576 aa		4.74	□□□□□ -1.65
ATG2	YNL242W	POL32	P47110	350 aa		4.74	□□□□□ -1.65
ATG2	YNL242W	IOC4	Q04213	475 aa		4.74	□□□□□ -1.65
ATG2	YNL242W	NOP53	Q12080	455 aa	Known RBP	4.73	□□□□□ -1.65
ATG2	YNL242W	BNR1	P40450	1375 aa		4.73	□□□□□ -1.65
ATG2	YNL242W	GEA2	P39993	1459 aa	Known RBP	4.73	□□□□□ -1.65
ATG2	YNL242W	ATG2	P53855	1592 aa		4.73	□□□□□ -1.65
ATG2	YNL242W	PRI1	P10363	409 aa		4.73	□□□□□ -1.65
ATG2	YNL242W	RIX1	P38883	763 aa	Predicted RBP	4.73	□□□□□ -1.65
ATG2	YNL242W	SAP155	P43612	1002 aa		4.73	□□□□□ -1.65
ATG2	YNL242W	NOP8	Q08287	484 aa	Predicted RBP	4.73	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 12.6 ms