RNA–Protein interactions for RNA: YMR308C

PSE1, Transcript of Karyopherin/importin that interacts with the nuclear pore complex, yeastyeast

Gene PSE1, Length 3,270 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PSE1YMR308C YMR196WQ04336 1088 aa6.1□□□□□ -1.43
PSE1YMR308C SSF1P38789 453 aaPredicted RBP6.1□□□□□ -1.43
PSE1YMR308C YSH1Q06224 779 aaPredicted RBP6.1□□□□□ -1.43
PSE1YMR308C INO80P53115 1489 aa6.09□□□□□ -1.43
PSE1YMR308C GEF1P37020 779 aa6.09□□□□□ -1.43
PSE1YMR308C BRE1Q07457 700 aaKnown RBP6.09□□□□□ -1.43
PSE1YMR308C TY1B-AO13527 1196 aaKnown RBP6.08□□□□□ -1.44
PSE1YMR308C NMD2P38798 1089 aaKnown RBP6.08□□□□□ -1.44
PSE1YMR308C YTA7P40340 1379 aa6.08□□□□□ -1.44
PSE1YMR308C VPS4P52917 437 aa6.08□□□□□ -1.44
PSE1YMR308C SEC20P28791 383 aa6.07□□□□□ -1.44
PSE1YMR308C SPC42P36094 363 aa6.07□□□□□ -1.44
PSE1YMR308C AIM21P40563 679 aa6.07□□□□□ -1.44
PSE1YMR308C PEA2P40091 420 aa6.07□□□□□ -1.44
PSE1YMR308C DOS2P54858 310 aa6.06□□□□□ -1.44
PSE1YMR308C LEM3P42838 414 aa6.05□□□□□ -1.44
PSE1YMR308C RAD2P07276 1031 aa6.04□□□□□ -1.44
PSE1YMR308C CEF1Q03654 590 aaPredicted RBP6.04□□□□□ -1.44
PSE1YMR308C PSK2Q08217 1101 aa6.04□□□□□ -1.44
PSE1YMR308C HOS4P40480 1083 aa6.03□□□□□ -1.44
PSE1YMR308C TY4A-JP47023 414 aa6.03□□□□□ -1.44
PSE1YMR308C NNF2P53253 936 aa6.03□□□□□ -1.44
PSE1YMR308C PKH1Q03407 766 aa6.03□□□□□ -1.44
PSE1YMR308C RPT2P40327 437 aaKnown RBP6.03□□□□□ -1.44
PSE1YMR308C ECM16Q04217 1267 aaKnown RBP6.02□□□□□ -1.45
PSE1YMR308C RAD51P25454 400 aa6.02□□□□□ -1.45
PSE1YMR308C RIX1P38883 763 aaPredicted RBP6.01□□□□□ -1.45
PSE1YMR308C CFT2Q12102 859 aaPredicted RBP6.01□□□□□ -1.45
PSE1YMR308C SUP35P05453 685 aaKnown RBP6.01□□□□□ -1.45
PSE1YMR308C GAL11P19659 1081 aa6.01□□□□□ -1.45
PSE1YMR308C SSA4P22202 642 aaKnown RBP6.01□□□□□ -1.45
PSE1YMR308C RRP14P36080 434 aaKnown RBP6.01□□□□□ -1.45
PSE1YMR308C DJP1P40564 432 aa6.01□□□□□ -1.45
PSE1YMR308C MTR4P47047 1073 aaKnown RBP6.01□□□□□ -1.45
PSE1YMR308C NAB3P38996 802 aaKnown RBP RIP-Chip data6□□□□□ -1.45not detected
PSE1YMR308C SEC3P33332 1336 aaKnown RBP6□□□□□ -1.45
PSE1YMR308C CDC11P32458 415 aa6□□□□□ -1.45
PSE1YMR308C RCF1Q03713 159 aa6□□□□□ -1.45
PSE1YMR308C RPA135P22138 1203 aaKnown RBP5.99□□□□□ -1.45
PSE1YMR308C GIR2Q03768 265 aaPredicted RBP5.99□□□□□ -1.45
PSE1YMR308C GDE1Q02979 1223 aa5.99□□□□□ -1.45
PSE1YMR308C TAF1P46677 1066 aa5.98□□□□□ -1.45
PSE1YMR308C MEH1Q02205 184 aa5.98□□□□□ -1.45
PSE1YMR308C CLF1Q12309 687 aaPredicted RBP5.98□□□□□ -1.45
PSE1YMR308C PIM1P36775 1133 aa5.98□□□□□ -1.45
PSE1YMR308C MPE1P35728 441 aaKnown RBP5.97□□□□□ -1.45
PSE1YMR308C HSC82P15108 705 aaKnown RBP5.97□□□□□ -1.45
PSE1YMR308C NMD3P38861 518 aaKnown RBP5.97□□□□□ -1.45
PSE1YMR308C YDR341CQ05506 607 aaKnown RBP5.97□□□□□ -1.45
PSE1YMR308C APL5Q08951 932 aaKnown RBP5.97□□□□□ -1.45
PSE1YMR308C MSH3P25336 1018 aa5.96□□□□□ -1.45
PSE1YMR308C AIM20P40451 204 aa5.96□□□□□ -1.45
PSE1YMR308C RPN7Q06103 429 aaKnown RBP5.96□□□□□ -1.45
PSE1YMR308C RIX7Q07844 837 aaKnown RBP5.96□□□□□ -1.46
PSE1YMR308C RSC8P43609 557 aaKnown RBP5.96□□□□□ -1.46
PSE1YMR308C SAP190P36123 1033 aa5.95□□□□□ -1.46
PSE1YMR308C ISW2Q08773 1120 aa5.95□□□□□ -1.46
PSE1YMR308C YLL054CQ12244 843 aa5.95□□□□□ -1.46
PSE1YMR308C VPS5Q92331 675 aa5.95□□□□□ -1.46
PSE1YMR308C YLR257WQ06146 321 aaKnown RBP5.94□□□□□ -1.46
PSE1YMR308C PMC1P38929 1173 aaPredicted RBP5.94□□□□□ -1.46
PSE1YMR308C NST1P53935 1240 aa5.94□□□□□ -1.46
PSE1YMR308C PAM1P37304 830 aaKnown RBP5.93□□□□□ -1.46
PSE1YMR308C UBX5Q06682 500 aa5.93□□□□□ -1.46
PSE1YMR308C NOP7P53261 605 aaKnown RBP5.93□□□□□ -1.46
PSE1YMR308C SIC1P38634 284 aa5.93□□□□□ -1.46
PSE1YMR308C FAF1P40546 346 aaPredicted RBP5.93□□□□□ -1.46
PSE1YMR308C SLX8P40072 274 aa5.92□□□□□ -1.46
PSE1YMR308C PSR1Q07800 427 aa5.92□□□□□ -1.46
PSE1YMR308C DEP1P31385 405 aa5.92□□□□□ -1.46
PSE1YMR308C MSH4P40965 878 aaPredicted RBP5.92□□□□□ -1.46
PSE1YMR308C MRX12P47084 519 aa5.92□□□□□ -1.46
PSE1YMR308C CLC1P17891 233 aa5.91□□□□□ -1.46
PSE1YMR308C SPB4P25808 606 aaPredicted RBP5.91□□□□□ -1.46
PSE1YMR308C NFU1P32860 256 aa5.91□□□□□ -1.46
PSE1YMR308C HEL2Q05580 639 aaKnown RBP5.91□□□□□ -1.46
PSE1YMR308C IMH1Q06704 911 aaKnown RBP5.91□□□□□ -1.46
PSE1YMR308C SEC27P41811 889 aaKnown RBP5.91□□□□□ -1.46
PSE1YMR308C UBP1P25037 809 aa5.9□□□□□ -1.46
PSE1YMR308C POL5P39985 1022 aaKnown RBP5.9□□□□□ -1.46
PSE1YMR308C HXT5P38695 592 aa5.9□□□□□ -1.47
PSE1YMR308C CDC45Q08032 650 aa5.9□□□□□ -1.47
PSE1YMR308C LTV1P34078 463 aa5.89□□□□□ -1.47
PSE1YMR308C PES4P39684 611 aa5.89□□□□□ -1.47
PSE1YMR308C OCA5P38738 679 aa5.89□□□□□ -1.47
PSE1YMR308C SYH1Q02875 849 aaKnown RBP5.89□□□□□ -1.47
PSE1YMR308C RPG1P38249 964 aaKnown RBP5.88□□□□□ -1.47
PSE1YMR308C PET111P08468 800 aa5.87□□□□□ -1.47
PSE1YMR308C JIP5Q06214 492 aaPredicted RBP5.87□□□□□ -1.47
PSE1YMR308C BNI4P53858 892 aa5.87□□□□□ -1.47
PSE1YMR308C CBF5P33322 483 aaKnown RBP RIP-Chip data5.87□□□□□ -1.47not detected
PSE1YMR308C NPL4P33755 580 aa5.87□□□□□ -1.47
PSE1YMR308C OPY1P38271 328 aa5.87□□□□□ -1.47
PSE1YMR308C IES2P40154 320 aa5.87□□□□□ -1.47
PSE1YMR308C CKB1P43639 278 aa5.87□□□□□ -1.47
PSE1YMR308C VID30P53076 958 aa5.87□□□□□ -1.47
PSE1YMR308C ALD3P54114 506 aa5.87□□□□□ -1.47
PSE1YMR308C TPS3P38426 1054 aaKnown RBP5.86□□□□□ -1.47
PSE1YMR308C BOI2P39969 1040 aa5.86□□□□□ -1.47
PSE1YMR308C YDL121CQ07541 149 aa5.86□□□□□ -1.47
Retrieved 100 of 5,963 RNA–protein pairs in 25.3 ms