RNA–Protein interactions for RNA: YLR340W

RPP0, Transcript of Conserved ribosomal protein P0 of the ribosomal stalk, yeastyeast

Gene RPP0, Length 939 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPP0YLR340W YGL015CP33199 130 aa8.22□□□□□ -1.09
RPP0YLR340W TY1B-DR3Q99231 1755 aa8.22□□□□□ -1.09
RPP0YLR340W TRM732Q03496 1420 aa8.2□□□□□ -1.1
RPP0YLR340W IRC20Q06554 1556 aa8.18□□□□□ -1.1
RPP0YLR340W YRF1-1P0CX20 1796 aa8.18□□□□□ -1.1
RPP0YLR340W YRF1-5P0CX21 1796 aa8.18□□□□□ -1.1
RPP0YLR340W YRF1-8P0CX22 1796 aa8.18□□□□□ -1.1
RPP0YLR340W DRS2P39524 1355 aa8.16□□□□□ -1.1
RPP0YLR340W VPS15P22219 1454 aa8.15□□□□□ -1.1
RPP0YLR340W NUP159P40477 1460 aa8.14□□□□□ -1.11
RPP0YLR340W POL1P13382 1468 aa8.08□□□□□ -1.12
RPP0YLR340W DNF2Q12675 1612 aa8.08□□□□□ -1.12
RPP0YLR340W TY1B-JR2P47100 1755 aaKnown RBP8.08□□□□□ -1.12
RPP0YLR340W TY1B-ER2Q03619 1755 aa8.08□□□□□ -1.12
RPP0YLR340W TY1B-MR1Q04214 1755 aa8.08□□□□□ -1.12
RPP0YLR340W TY1B-MR2Q04670 1755 aaKnown RBP8.08□□□□□ -1.12
RPP0YLR340W TY1B-LR1Q12088 1755 aaKnown RBP8.08□□□□□ -1.12
RPP0YLR340W TY1B-NL1Q12112 1755 aa8.08□□□□□ -1.12
RPP0YLR340W TY1B-GR1Q12141 1755 aa8.08□□□□□ -1.12
RPP0YLR340W TY1B-BLQ12490 1755 aa8.08□□□□□ -1.12
RPP0YLR340W SPT21P35209 758 aa8.08□□□□□ -1.12
RPP0YLR340W CDC27P38042 758 aa8.08□□□□□ -1.12
RPP0YLR340W SPP41P38904 1435 aa8.08□□□□□ -1.12
RPP0YLR340W NTE1Q04958 1679 aa8.08□□□□□ -1.12
RPP0YLR340W SMC4Q12267 1418 aa8.06□□□□□ -1.12
RPP0YLR340W YKR023WP36119 530 aaKnown RBP8.04□□□□□ -1.12
RPP0YLR340W YOR1P53049 1477 aa8.04□□□□□ -1.12
RPP0YLR340W TSC11P40061 1430 aa8.03□□□□□ -1.12
RPP0YLR340W RPO21P04050 1733 aaKnown RBP8.03□□□□□ -1.12
RPP0YLR340W VTH1P40438 1549 aa8.02□□□□□ -1.13
RPP0YLR340W VTH2P40890 1549 aa8.02□□□□□ -1.13
RPP0YLR340W STU1P38198 1513 aa7.99□□□□□ -1.13
RPP0YLR340W NUP170P38181 1502 aa7.98□□□□□ -1.13
RPP0YLR340W SNT2P53127 1403 aa7.95□□□□□ -1.14
RPP0YLR340W MYO4P32492 1471 aa7.94□□□□□ -1.14
RPP0YLR340W YOR093CQ12275 1648 aa7.93□□□□□ -1.14
RPP0YLR340W SPO14P36126 1683 aa7.92□□□□□ -1.14
RPP0YLR340W ULS1Q08562 1619 aa7.89□□□□□ -1.15
RPP0YLR340W SNQ2P32568 1501 aaKnown RBP7.89□□□□□ -1.15
RPP0YLR340W HOP09932 586 aa7.89□□□□□ -1.15
RPP0YLR340W DOP1Q03921 1698 aa7.89□□□□□ -1.15
RPP0YLR340W MET10P39692 1035 aa7.87□□□□□ -1.15
RPP0YLR340W TFC8Q12308 588 aa7.87□□□□□ -1.15
RPP0YLR340W DCD1P06773 312 aa7.85□□□□□ -1.15
RPP0YLR340W MAP2P38174 421 aaKnown RBP7.84□□□□□ -1.15
RPP0YLR340W UBP10P53874 792 aaPredicted RBP7.83□□□□□ -1.16
RPP0YLR340W TRM3Q07527 1436 aa7.83□□□□□ -1.16
RPP0YLR340W PDR12Q02785 1511 aa7.83□□□□□ -1.16
RPP0YLR340W RIM101P33400 625 aa7.81□□□□□ -1.16
RPP0YLR340W IQG1Q12280 1495 aa7.79□□□□□ -1.16
RPP0YLR340W STH1P32597 1359 aa7.78□□□□□ -1.16
RPP0YLR340W PDR10P51533 1564 aa7.78□□□□□ -1.16
RPP0YLR340W GDB1Q06625 1536 aa7.77□□□□□ -1.17
RPP0YLR340W NUP157P40064 1391 aaKnown RBP7.73□□□□□ -1.17
RPP0YLR340W RTT106P40161 455 aa7.73□□□□□ -1.17
RPP0YLR340W PDR15Q04182 1529 aaKnown RBP7.73□□□□□ -1.17
RPP0YLR340W YTA7P40340 1379 aa7.72□□□□□ -1.17
RPP0YLR340W MLP2P40457 1679 aa7.72□□□□□ -1.17
RPP0YLR340W BUD3P25558 1636 aa7.71□□□□□ -1.17
RPP0YLR340W ARO1P08566 1588 aaKnown RBP7.7□□□□□ -1.18
RPP0YLR340W DNF3Q12674 1656 aa7.7□□□□□ -1.18
RPP0YLR340W CHC1P22137 1653 aaKnown RBP7.68□□□□□ -1.18
RPP0YLR340W SCY1P53009 804 aa7.66□□□□□ -1.18
RPP0YLR340W BCH2P36122 765 aa7.62□□□□□ -1.19
RPP0YLR340W SEC7P11075 2009 aaKnown RBP7.58□□□□□ -1.2
RPP0YLR340W YAP3P38749 330 aa7.58□□□□□ -1.2
RPP0YLR340W SLX5P32828 619 aaKnown RBP7.57□□□□□ -1.2
RPP0YLR340W OXP1P28273 1286 aa7.55□□□□□ -1.2
RPP0YLR340W TY3B-GQ99315 1547 aa7.55□□□□□ -1.2
RPP0YLR340W BUD31P25337 157 aaPredicted RBP7.54□□□□□ -1.2
RPP0YLR340W MAK10Q02197 733 aa7.54□□□□□ -1.2
RPP0YLR340W TIF4632P39936 914 aaKnown RBP7.53□□□□□ -1.2
RPP0YLR340W USO1P25386 1790 aa7.51□□□□□ -1.21
RPP0YLR340W TGL3P40308 642 aa7.51□□□□□ -1.21
RPP0YLR340W BNR1P40450 1375 aa7.5□□□□□ -1.21
RPP0YLR340W YSP2Q06681 1438 aa7.49□□□□□ -1.21
RPP0YLR340W CAT8P39113 1433 aa7.46□□□□□ -1.21
RPP0YLR340W YIL055CP40523 627 aaKnown RBP7.45□□□□□ -1.22
RPP0YLR340W SAS10Q12136 610 aaPredicted RBP7.44□□□□□ -1.22
RPP0YLR340W YBT1P32386 1661 aa7.44□□□□□ -1.22
RPP0YLR340W IFH1P39520 1085 aa7.43□□□□□ -1.22
RPP0YLR340W PTP3P40048 928 aa7.42□□□□□ -1.22
RPP0YLR340W EPS1P40557 701 aa7.41□□□□□ -1.22
RPP0YLR340W TAF7Q05021 590 aa7.41□□□□□ -1.22
RPP0YLR340W URN1Q06525 465 aaKnown RBP7.4□□□□□ -1.22
RPP0YLR340W BDF1P35817 686 aa7.39□□□□□ -1.23
RPP0YLR340W CKB1P43639 278 aa7.39□□□□□ -1.23
RPP0YLR340W GEA1P47102 1408 aaPredicted RBP7.38□□□□□ -1.23
RPP0YLR340W TFA1P36100 482 aa7.38□□□□□ -1.23
RPP0YLR340W THI12P42883 340 aa7.38□□□□□ -1.23
RPP0YLR340W THI5P43534 340 aa7.38□□□□□ -1.23
RPP0YLR340W THI11P47183 340 aa7.38□□□□□ -1.23
RPP0YLR340W YMR196WQ04336 1088 aa7.38□□□□□ -1.23
RPP0YLR340W THI13Q07748 340 aa7.38□□□□□ -1.23
RPP0YLR340W TY1B-NL2Q99337 1749 aaKnown RBP7.36□□□□□ -1.23
RPP0YLR340W IML1P47170 1584 aa7.35□□□□□ -1.23
RPP0YLR340W HAP1P0CE41 1502 aa7.34□□□□□ -1.23
RPP0YLR340W NUP188P52593 1655 aaKnown RBP7.34□□□□□ -1.23
RPP0YLR340W RSM7P47150 247 aa7.33□□□□□ -1.24
RPP0YLR340W GLN1P32288 370 aaKnown RBP7.31□□□□□ -1.24
Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms