RNA–Protein interactions for RNA: YLR062C

BUD28, Transcript of Dubious open reading frame, yeastyeast

Gene BUD28, Length 378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BUD28YLR062C NTE1Q04958 1679 aa8.37□□□□□ -1.07
BUD28YLR062C RPO21P04050 1733 aaKnown RBP8.34□□□□□ -1.07
BUD28YLR062C VTH1P40438 1549 aa8.34□□□□□ -1.08
BUD28YLR062C VTH2P40890 1549 aa8.34□□□□□ -1.08
BUD28YLR062C TSC11P40061 1430 aa8.31□□□□□ -1.08
BUD28YLR062C NUP159P40477 1460 aa8.31□□□□□ -1.08
BUD28YLR062C GEA2P39993 1459 aaKnown RBP8.3□□□□□ -1.08
BUD28YLR062C ISW2Q08773 1120 aa8.29□□□□□ -1.08
BUD28YLR062C MYO4P32492 1471 aa8.27□□□□□ -1.09
BUD28YLR062C VPS15P22219 1454 aa8.26□□□□□ -1.09
BUD28YLR062C YTA7P40340 1379 aa8.25□□□□□ -1.09
BUD28YLR062C SNQ2P32568 1501 aaKnown RBP8.24□□□□□ -1.09
BUD28YLR062C ITT1Q04638 464 aa8.23□□□□□ -1.09
BUD28YLR062C SNT2P53127 1403 aa8.19□□□□□ -1.1
BUD28YLR062C RPG1P38249 964 aaKnown RBP8.17□□□□□ -1.1
BUD28YLR062C MLP2P40457 1679 aa8.17□□□□□ -1.1
BUD28YLR062C SPO14P36126 1683 aa8.16□□□□□ -1.1
BUD28YLR062C DRS2P39524 1355 aa8.16□□□□□ -1.1
BUD28YLR062C PRI1P10363 409 aa8.15□□□□□ -1.1
BUD28YLR062C MMS1Q06211 1407 aa8.14□□□□□ -1.11
BUD28YLR062C STH1P32597 1359 aa8.14□□□□□ -1.11
BUD28YLR062C MIF2P35201 549 aa8.13□□□□□ -1.11
BUD28YLR062C ULS1Q08562 1619 aa8.13□□□□□ -1.11
BUD28YLR062C NUP170P38181 1502 aa8.12□□□□□ -1.11
BUD28YLR062C PDR12Q02785 1511 aa8.11□□□□□ -1.11
BUD28YLR062C IRC20Q06554 1556 aa8.1□□□□□ -1.11
BUD28YLR062C DNF2Q12675 1612 aa8.1□□□□□ -1.11
BUD28YLR062C MET10P39692 1035 aa8.09□□□□□ -1.11
BUD28YLR062C PDR15Q04182 1529 aaKnown RBP8.07□□□□□ -1.12
BUD28YLR062C GDB1Q06625 1536 aa8.07□□□□□ -1.12
BUD28YLR062C DOP1Q03921 1698 aa8.06□□□□□ -1.12
BUD28YLR062C ABP1P15891 592 aaKnown RBP8.05□□□□□ -1.12
BUD28YLR062C RTT106P40161 455 aa8.05□□□□□ -1.12
BUD28YLR062C AAD16Q02895 342 aa8.05□□□□□ -1.12
BUD28YLR062C TFA1P36100 482 aa8.02□□□□□ -1.13
BUD28YLR062C IQG1Q12280 1495 aa8□□□□□ -1.13
BUD28YLR062C BUD3P25558 1636 aa7.99□□□□□ -1.13
BUD28YLR062C NUP157P40064 1391 aaKnown RBP7.98□□□□□ -1.13
BUD28YLR062C PDR10P51533 1564 aa7.98□□□□□ -1.13
BUD28YLR062C SAS10Q12136 610 aaPredicted RBP7.98□□□□□ -1.13
BUD28YLR062C TRM3Q07527 1436 aa7.97□□□□□ -1.13
BUD28YLR062C CHC1P22137 1653 aaKnown RBP7.95□□□□□ -1.14
BUD28YLR062C YBT1P32386 1661 aa7.95□□□□□ -1.14
BUD28YLR062C PRY3P47033 881 aa7.95□□□□□ -1.14
BUD28YLR062C ARO1P08566 1588 aaKnown RBP7.93□□□□□ -1.14
BUD28YLR062C TAF7Q05021 590 aa7.93□□□□□ -1.14
BUD28YLR062C TY3B-GQ99315 1547 aa7.92□□□□□ -1.14
BUD28YLR062C SEC7P11075 2009 aaKnown RBP7.91□□□□□ -1.14
BUD28YLR062C GEA1P47102 1408 aaPredicted RBP7.89□□□□□ -1.15
BUD28YLR062C CAT8P39113 1433 aa7.88□□□□□ -1.15
BUD28YLR062C RPL17AP05740 184 aaKnown RBP7.88□□□□□ -1.15
BUD28YLR062C IFH1P39520 1085 aa7.88□□□□□ -1.15
BUD28YLR062C RPL17BP46990 184 aaKnown RBP7.88□□□□□ -1.15
BUD28YLR062C YFR006WP43590 535 aa7.87□□□□□ -1.15
BUD28YLR062C YOR093CQ12275 1648 aa7.87□□□□□ -1.15
BUD28YLR062C REB1P21538 810 aa7.84□□□□□ -1.15
BUD28YLR062C YSP2Q06681 1438 aa7.81□□□□□ -1.16
BUD28YLR062C DNF3Q12674 1656 aa7.81□□□□□ -1.16
BUD28YLR062C TSR3Q12094 313 aaKnown RBP7.78□□□□□ -1.16
BUD28YLR062C BNR1P40450 1375 aa7.75□□□□□ -1.17
BUD28YLR062C CKB1P43639 278 aa7.75□□□□□ -1.17
BUD28YLR062C YAP3P38749 330 aa7.7□□□□□ -1.18
BUD28YLR062C SRB8P25648 1427 aa7.69□□□□□ -1.18
BUD28YLR062C USO1P25386 1790 aa7.68□□□□□ -1.18
BUD28YLR062C NUP188P52593 1655 aaKnown RBP7.64□□□□□ -1.19
BUD28YLR062C URN1Q06525 465 aaKnown RBP7.62□□□□□ -1.19
BUD28YLR062C MAK10Q02197 733 aa7.61□□□□□ -1.19
BUD28YLR062C VMR1P38735 1592 aa7.61□□□□□ -1.19
BUD28YLR062C IML1P47170 1584 aa7.6□□□□□ -1.19
BUD28YLR062C HAP1P0CE41 1502 aa7.59□□□□□ -1.19
BUD28YLR062C BUD21Q08492 214 aaPredicted RBP7.58□□□□□ -1.2
BUD28YLR062C IPL1P38991 367 aa7.56□□□□□ -1.2
BUD28YLR062C IKI3Q06706 1349 aaKnown RBP7.55□□□□□ -1.2
BUD28YLR062C TY1B-NL2Q99337 1749 aaKnown RBP7.55□□□□□ -1.2
BUD28YLR062C TYS1P36421 394 aaKnown RBP7.52□□□□□ -1.21
BUD28YLR062C GCN2P15442 1659 aa7.51□□□□□ -1.21
BUD28YLR062C MRPL32P25348 183 aa7.5□□□□□ -1.21
BUD28YLR062C PDR5P33302 1511 aaKnown RBP7.5□□□□□ -1.21
BUD28YLR062C SPT21P35209 758 aa7.48□□□□□ -1.21
BUD28YLR062C SSM4P40318 1319 aa7.48□□□□□ -1.21
BUD28YLR062C YMR196WQ04336 1088 aa7.44□□□□□ -1.22
BUD28YLR062C HAA1Q12753 694 aaKnown RBP7.44□□□□□ -1.22
BUD28YLR062C PDR11P40550 1411 aa7.44□□□□□ -1.22
BUD28YLR062C THI12P42883 340 aa7.42□□□□□ -1.22
BUD28YLR062C THI5P43534 340 aa7.42□□□□□ -1.22
BUD28YLR062C THI11P47183 340 aa7.42□□□□□ -1.22
BUD28YLR062C THI13Q07748 340 aa7.42□□□□□ -1.22
BUD28YLR062C RIM101P33400 625 aa7.36□□□□□ -1.23
BUD28YLR062C NUP192P47054 1683 aa7.35□□□□□ -1.23
BUD28YLR062C YCK3P39962 524 aa7.34□□□□□ -1.23
BUD28YLR062C CFT1Q06632 1357 aaKnown RBP7.33□□□□□ -1.24
BUD28YLR062C BCK1Q01389 1478 aa7.33□□□□□ -1.24
BUD28YLR062C KRE5P22023 1365 aa7.33□□□□□ -1.24
BUD28YLR062C RAV1P47104 1357 aa7.32□□□□□ -1.24
BUD28YLR062C RIA1P53893 1110 aa7.29□□□□□ -1.24
BUD28YLR062C MRX12P47084 519 aa7.28□□□□□ -1.24
BUD28YLR062C YKR023WP36119 530 aaKnown RBP7.27□□□□□ -1.25
BUD28YLR062C PAF1P38351 445 aa7.26□□□□□ -1.25
BUD28YLR062C YNR029CP53729 429 aaKnown RBP7.26□□□□□ -1.25
BUD28YLR062C RTC1Q08281 1341 aa7.26□□□□□ -1.25
Retrieved 100 of 5,963 RNA–protein pairs in 12.5 ms