RNA–Protein interactions for RNA: YIL104C

SHQ1, Transcript of Chaperone protein, yeastyeast

Gene SHQ1, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHQ1YIL104C YFR006WP43590 535 aa6.04□□□□□ -1.44
SHQ1YIL104C XRN1P22147 1528 aaKnown RBP6.02□□□□□ -1.45
SHQ1YIL104C ABP1P15891 592 aaKnown RBP6.01□□□□□ -1.45
SHQ1YIL104C STS1P38637 319 aa6.01□□□□□ -1.45
SHQ1YIL104C MGA2P40578 1113 aa6.01□□□□□ -1.45
SHQ1YIL104C JIP4Q03361 876 aa6.01□□□□□ -1.45
SHQ1YIL104C CST9Q06032 482 aa6□□□□□ -1.45
SHQ1YIL104C SAP30P38429 201 aa5.98□□□□□ -1.45
SHQ1YIL104C BCK2P33306 851 aa5.97□□□□□ -1.45
SHQ1YIL104C DAN4P47179 1161 aa5.97□□□□□ -1.45
SHQ1YIL104C CHL1P22516 861 aaPredicted RBP5.96□□□□□ -1.46
SHQ1YIL104C YDL129WQ07555 291 aa5.96□□□□□ -1.46
SHQ1YIL104C GYP5Q12344 894 aa5.96□□□□□ -1.46
SHQ1YIL104C BUD4P47136 1447 aa5.95□□□□□ -1.46
SHQ1YIL104C HTA1P04911 132 aaKnown RBP5.94□□□□□ -1.46
SHQ1YIL104C HTA2P04912 132 aa5.94□□□□□ -1.46
SHQ1YIL104C PRE3P38624 215 aa5.92□□□□□ -1.46
SHQ1YIL104C PTC4P38089 393 aa5.91□□□□□ -1.46
SHQ1YIL104C THO2P53552 1597 aaKnown RBP5.91□□□□□ -1.46
SHQ1YIL104C DCW1P36091 449 aa5.9□□□□□ -1.46
SHQ1YIL104C RCR1P38212 213 aa5.89□□□□□ -1.47
SHQ1YIL104C REV3P14284 1504 aa5.89□□□□□ -1.47
SHQ1YIL104C PEP1P32319 1579 aa5.89□□□□□ -1.47
SHQ1YIL104C YEL023CP39992 682 aa5.89□□□□□ -1.47
SHQ1YIL104C TAF2P23255 1407 aa5.88□□□□□ -1.47
SHQ1YIL104C MDS3P53094 1487 aa5.88□□□□□ -1.47
SHQ1YIL104C ATG2P53855 1592 aa5.84□□□□□ -1.47
SHQ1YIL104C XDJ1P39102 459 aa5.81□□□□□ -1.48
SHQ1YIL104C SIN3P22579 1536 aa5.81□□□□□ -1.48
SHQ1YIL104C GRE2Q12068 342 aaKnown RBP5.8□□□□□ -1.48
SHQ1YIL104C SKI3P17883 1432 aaKnown RBP5.8□□□□□ -1.48
SHQ1YIL104C VRP1P37370 817 aa5.79□□□□□ -1.48
SHQ1YIL104C ELP4Q02884 456 aaKnown RBP5.79□□□□□ -1.48
SHQ1YIL104C PML39Q03760 334 aa5.78□□□□□ -1.48
SHQ1YIL104C SSK2P53599 1579 aa5.77□□□□□ -1.49
SHQ1YIL104C ATH1P48016 1211 aa5.74□□□□□ -1.49
SHQ1YIL104C GUT1P32190 709 aa5.73□□□□□ -1.49
SHQ1YIL104C MIF2P35201 549 aa5.73□□□□□ -1.49
SHQ1YIL104C ARH1P48360 493 aa5.72□□□□□ -1.49
SHQ1YIL104C YDR344CQ05510 147 aa5.71□□□□□ -1.5
SHQ1YIL104C DPS1P04802 557 aaKnown RBP5.7□□□□□ -1.5
SHQ1YIL104C MAK11P20484 414 aaKnown RBP5.7□□□□□ -1.5
SHQ1YIL104C ESP1Q03018 1630 aa5.7□□□□□ -1.5
SHQ1YIL104C PTC3P34221 468 aaKnown RBP5.69□□□□□ -1.5
SHQ1YIL104C UFD4P33202 1483 aa5.69□□□□□ -1.5
SHQ1YIL104C YPK9Q12697 1472 aa5.69□□□□□ -1.5
SHQ1YIL104C SCC2Q04002 1493 aa5.68□□□□□ -1.5
SHQ1YIL104C BPT1P14772 1559 aa5.68□□□□□ -1.5
SHQ1YIL104C SPT23P35210 1082 aa5.67□□□□□ -1.5
SHQ1YIL104C PEX29Q03370 554 aa5.67□□□□□ -1.5
SHQ1YIL104C RPO31P04051 1460 aa5.67□□□□□ -1.5
SHQ1YIL104C EDS1P38073 919 aa5.66□□□□□ -1.5
SHQ1YIL104C MID1P41821 548 aa5.65□□□□□ -1.5
SHQ1YIL104C NST1P53935 1240 aa5.64□□□□□ -1.51
SHQ1YIL104C AI4P03878 556 aa5.64□□□□□ -1.51
SHQ1YIL104C MPH3P0CE00 602 aa5.63□□□□□ -1.51
SHQ1YIL104C RAM2P29703 316 aa5.63□□□□□ -1.51
SHQ1YIL104C COQ8P27697 501 aa5.61□□□□□ -1.51
SHQ1YIL104C HAP5Q02516 242 aa5.61□□□□□ -1.51
SHQ1YIL104C YCF1P39109 1515 aaKnown RBP5.61□□□□□ -1.51
SHQ1YIL104C SOL3P38858 249 aa5.6□□□□□ -1.51
SHQ1YIL104C BNI4P53858 892 aa5.59□□□□□ -1.51
SHQ1YIL104C MYO2P19524 1574 aaKnown RBP5.58□□□□□ -1.52
SHQ1YIL104C PTC2P39966 464 aaKnown RBP5.58□□□□□ -1.52
SHQ1YIL104C TOP2P06786 1428 aaKnown RBP5.57□□□□□ -1.52
SHQ1YIL104C POL1P13382 1468 aa5.57□□□□□ -1.52
SHQ1YIL104C CHD1P32657 1468 aa5.57□□□□□ -1.52
SHQ1YIL104C YML082WQ04533 649 aaKnown RBP5.57□□□□□ -1.52
SHQ1YIL104C NOP53Q12080 455 aaKnown RBP5.56□□□□□ -1.52
SHQ1YIL104C DNF1P32660 1571 aa5.55□□□□□ -1.52
SHQ1YIL104C STU1P38198 1513 aa5.54□□□□□ -1.52
SHQ1YIL104C ILV3P39522 585 aaKnown RBP5.53□□□□□ -1.52
SHQ1YIL104C TY2B-LR1P0C2J3 1770 aa5.53□□□□□ -1.52
SHQ1YIL104C TY2B-FP0CX63 1770 aa5.53□□□□□ -1.52
SHQ1YIL104C TY2B-GR2P0CX64 1770 aa5.53□□□□□ -1.52
SHQ1YIL104C TY2B-CP25384 1770 aa5.53□□□□□ -1.52
SHQ1YIL104C TY2B-DR2Q03494 1770 aa5.53□□□□□ -1.52
SHQ1YIL104C TY1B-DR1Q03855 1755 aa5.53□□□□□ -1.52
SHQ1YIL104C TY2B-DR3Q07791 1770 aaKnown RBP5.53□□□□□ -1.52
SHQ1YIL104C TY2B-OR1Q12113 1770 aa5.53□□□□□ -1.52
SHQ1YIL104C TY2B-DR1Q12472 1770 aa5.53□□□□□ -1.52
SHQ1YIL104C TY2B-OR2Q12501 1770 aa5.53□□□□□ -1.52
SHQ1YIL104C YGR273CP53329 174 aa5.53□□□□□ -1.52
SHQ1YIL104C MPC54Q08550 464 aa5.53□□□□□ -1.52
SHQ1YIL104C SRC1Q03707 834 aa5.52□□□□□ -1.53
SHQ1YIL104C RQC2Q12532 1038 aaKnown RBP5.51□□□□□ -1.53
SHQ1YIL104C CDC25P04821 1589 aa5.51□□□□□ -1.53
SHQ1YIL104C RKR1Q04781 1562 aa5.51□□□□□ -1.53
SHQ1YIL104C PAN1P32521 1480 aa5.51□□□□□ -1.53
SHQ1YIL104C YOR1P53049 1477 aa5.51□□□□□ -1.53
SHQ1YIL104C NMA111P53920 997 aa5.5□□□□□ -1.53
SHQ1YIL104C TY1B-BRQ12193 1756 aa5.5□□□□□ -1.53
SHQ1YIL104C TY1B-GR3Q12316 1755 aa5.5□□□□□ -1.53
SHQ1YIL104C TY1B-ORQ92393 1755 aa5.5□□□□□ -1.53
SHQ1YIL104C SMC4Q12267 1418 aa5.5□□□□□ -1.53
SHQ1YIL104C MMS22Q06164 1454 aa5.49□□□□□ -1.53
SHQ1YIL104C TY1B-DR3Q99231 1755 aa5.48□□□□□ -1.53
SHQ1YIL104C DPL1Q05567 589 aa5.48□□□□□ -1.53
SHQ1YIL104C SLI15P38283 698 aa5.47□□□□□ -1.53
SHQ1YIL104C RGA2Q06407 1009 aa5.47□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 9.3 ms